Elena E Giorgi

Summary

Affiliation: Los Alamos National Laboratory
Country: USA

Publications

  1. pmc A note on two-sample tests for comparing intra-individual genetic sequence diversity between populations
    E E Giorgi
    Los Alamos National Laboratory, Los Alamos, NM 87545, USA
    Biometrics 68:1323-6; author reply 1326. 2012
  2. pmc Nef gene evolution from a single transmitted strain in acute SIV infection
    Benjamin N Bimber
    Department of Pathology and Laboratory Medicine, Wisconsin National Primate Research Center, University of Wisconsin Madison, Madison, Wisconsin 53706, USA
    Retrovirology 6:57. 2009
  3. pmc Estimating time since infection in early homogeneous HIV-1 samples using a poisson model
    Elena E Giorgi
    Los Alamos National Laboratory, Los Alamos, NM 87545, USA
    BMC Bioinformatics 11:532. 2010
  4. pmc Modeling sequence evolution in HIV-1 infection with recombination
    Elena E Giorgi
    Theoretical Biology and Biophysics, Los Alamos National Laboratory, Los Alamos, NM 87545, USA
    J Theor Biol 329:82-93. 2013
  5. pmc Transmission of single HIV-1 genomes and dynamics of early immune escape revealed by ultra-deep sequencing
    Will Fischer
    Theoretical Biology, Los Alamos National Laboratory, Los Alamos, New Mexico, United States of America
    PLoS ONE 5:e12303. 2010
  6. pmc Modeling sequence evolution in acute HIV-1 infection
    Ha Youn Lee
    Theoretical Biology and Biophysics, Los Alamos National Laboratory, Los Alamos, NM 87545, USA
    J Theor Biol 261:341-60. 2009

Collaborators

  • Brandon F Keele
  • Vitaly V Ganusov
  • Thomas Leitner
  • Ha Youn Lee
  • Persephone Borrow
  • Will Fischer
  • Benjamin N Bimber
  • Barton F Haynes
  • George M Shaw
  • Timothy C Wallstrom
  • Bette T Korber
  • Lance Green
  • Andrew J McMichael
  • Cheryl D Gleasner
  • Shuyi Wang
  • Tanmoy Bhattacharya
  • Cliff S Han
  • Ambarish Nag
  • Peter T Hraber
  • Alan S Perelson
  • Chien Chi Lo
  • Beatrice H Hahn
  • DAVID H O'CONNOR
  • Baek Kim
  • Stephen Dewhurst
  • Anthony L Almudevar
  • Pauline Chugh

Detail Information

Publications6

  1. pmc A note on two-sample tests for comparing intra-individual genetic sequence diversity between populations
    E E Giorgi
    Los Alamos National Laboratory, Los Alamos, NM 87545, USA
    Biometrics 68:1323-6; author reply 1326. 2012
    ..it is not always possible to apply the Welch-Satterthwaite approximate t-test, and we provide explicit formulas for the degrees of freedom to be used when, on the other hand, such approximation is indeed possible...
  2. pmc Nef gene evolution from a single transmitted strain in acute SIV infection
    Benjamin N Bimber
    Department of Pathology and Laboratory Medicine, Wisconsin National Primate Research Center, University of Wisconsin Madison, Madison, Wisconsin 53706, USA
    Retrovirology 6:57. 2009
    ....
  3. pmc Estimating time since infection in early homogeneous HIV-1 samples using a poisson model
    Elena E Giorgi
    Los Alamos National Laboratory, Los Alamos, NM 87545, USA
    BMC Bioinformatics 11:532. 2010
    ..g., BEAST), which are instead based on the simulation of genealogies...
  4. pmc Modeling sequence evolution in HIV-1 infection with recombination
    Elena E Giorgi
    Theoretical Biology and Biophysics, Los Alamos National Laboratory, Los Alamos, NM 87545, USA
    J Theor Biol 329:82-93. 2013
    ..This remains unchanged when we introduce recombination, though the confidence intervals of the mean HD obtained ignoring recombination are overly conservative...
  5. pmc Transmission of single HIV-1 genomes and dynamics of early immune escape revealed by ultra-deep sequencing
    Will Fischer
    Theoretical Biology, Los Alamos National Laboratory, Los Alamos, New Mexico, United States of America
    PLoS ONE 5:e12303. 2010
    ..Dramatic shifts in the frequencies of epitope variants during the first weeks of infection revealed a complex interplay between viral fitness and immune escape...
  6. pmc Modeling sequence evolution in acute HIV-1 infection
    Ha Youn Lee
    Theoretical Biology and Biophysics, Los Alamos National Laboratory, Los Alamos, NM 87545, USA
    J Theor Biol 261:341-60. 2009
    ..The model can also be applied to longitudinal patient data to estimate within-host viral evolutionary parameters...