M G Reese

Summary

Affiliation: Lawrence Berkeley National Laboratory
Country: USA

Publications

  1. ncbi Improved splice site detection in Genie
    M G Reese
    Human Genome Informatics Group, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA
    J Comput Biol 4:311-23. 1997
  2. ncbi Genome annotation assessment in Drosophila melanogaster
    M G Reese
    Berkeley Drosophila Genome Project, Department of Molecular and Cell Biology, University of California, Berkeley 94720 3200, USA
    Genome Res 10:483-501. 2000
  3. ncbi Genie--gene finding in Drosophila melanogaster
    M G Reese
    Berkeley Drosophila Genome Project, Department of Molecular and Cell Biology, University of California, Berkeley 94720 3200, USA
    Genome Res 10:529-38. 2000
  4. ncbi Application of a time-delay neural network to promoter annotation in the Drosophila melanogaster genome
    M G Reese
    Berkeley Drosophila Genome Project, Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720 3200, USA
    Comput Chem 26:51-6. 2001
  5. ncbi Annotating eukaryote genomes
    S Lewis
    Department of Molecular and Cell Biology, Berkeley Drosophila Genome Project, University of California, Berkeley, CA 94720 3200, USA
    Curr Opin Struct Biol 10:349-54. 2000

Detail Information

Publications5

  1. ncbi Improved splice site detection in Genie
    M G Reese
    Human Genome Informatics Group, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA
    J Comput Biol 4:311-23. 1997
    ..In further splice site experiments, we also looked at correlations between splice site scores and intron and exon lengths, as well as at the effect of distance to the nearest splice site on false positive rates...
  2. ncbi Genome annotation assessment in Drosophila melanogaster
    M G Reese
    Berkeley Drosophila Genome Project, Department of Molecular and Cell Biology, University of California, Berkeley 94720 3200, USA
    Genome Res 10:483-501. 2000
    ....
  3. ncbi Genie--gene finding in Drosophila melanogaster
    M G Reese
    Berkeley Drosophila Genome Project, Department of Molecular and Cell Biology, University of California, Berkeley 94720 3200, USA
    Genome Res 10:529-38. 2000
    ..content sensors (exons, introns, intergenic) and alignments of mRNA, EST, and peptide sequences. The assessment showed that Genie could effectively be used for the annotation of complete genomes from higher organisms...
  4. ncbi Application of a time-delay neural network to promoter annotation in the Drosophila melanogaster genome
    M G Reese
    Berkeley Drosophila Genome Project, Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720 3200, USA
    Comput Chem 26:51-6. 2001
    ..The present work can be regarded as one of the first intensive studies that applies novel gene regulation technologies to the identification of the complex gene regulation sites in the genome of Drosophila melanogaster...
  5. ncbi Annotating eukaryote genomes
    S Lewis
    Department of Molecular and Cell Biology, Berkeley Drosophila Genome Project, University of California, Berkeley, CA 94720 3200, USA
    Curr Opin Struct Biol 10:349-54. 2000
    ..These efforts in analysis are being linked to new ways of visualizing computationally annotated genomes...