Chris Mungall

Summary

Affiliation: Lawrence Berkeley National Laboratory
Country: USA

Publications

  1. pmc OPPL-Galaxy, a Galaxy tool for enhancing ontology exploitation as part of bioinformatics workflows
    Mikel Egaña Aranguren
    Ontology Engineering Group, School of Computer Science, Technical University of Madrid UPM, Boadilla del Monte, 28660, Spain
    J Biomed Semantics 4:2. 2013
  2. pmc Dovetailing biology and chemistry: integrating the Gene Ontology with the ChEBI chemical ontology
    David P Hill
    Mouse Genome Informatics, The Jackson Laboratory, Bar Harbor, ME 04609, USA
    BMC Genomics 14:513. 2013
  3. pmc Uberon, an integrative multi-species anatomy ontology
    Christopher J Mungall
    Genomics Division, Lawrence Berkeley National Laboratory, 1 Cycltotron Road MS 64 121, Berkeley, CA 94720, USA
    Genome Biol 13:R5. 2012
  4. pmc ONTO-ToolKit: enabling bio-ontology engineering via Galaxy
    Erick Antezana
    Department of Biology, Norwegian University of Science and Technology NTNU, Høgskoleringen 5, N 7491 Trondheim, Norway
    BMC Bioinformatics 11:S8. 2010
  5. pmc AmiGO: online access to ontology and annotation data
    Seth Carbon
    Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA
    Bioinformatics 25:288-9. 2009

Collaborators

  • Georgios V Gkoutos
  • Suzanna E Lewis
  • Valerie Wood
  • Pascale Gaudet
  • Seth Carbon
  • Erick Antezana
  • David P Hill
  • Mikel Egaña Aranguren
  • Paula de Matos
  • Mark D Wilkinson
  • Mike Bada
  • Midori A Harris
  • Colin Batchelor
  • Christoph Steinbeck
  • Marcus Ennis
  • Gareth Owen
  • Rebecca E Foulger
  • Paola Roncaglia
  • Alejandro Rodríguez González
  • Nico Adams
  • Steve Turner
  • Namrata S Kale
  • Harold J Drabkin
  • Janna Hastings
  • Jane Lomax
  • Tanya Z Berardini
  • Jesualdo Tomás Fernández-Breis
  • Heiko Dietze
  • Martin Kuiper
  • Vladimir Mironov
  • Aravind Venkatesan

Detail Information

Publications5

  1. pmc OPPL-Galaxy, a Galaxy tool for enhancing ontology exploitation as part of bioinformatics workflows
    Mikel Egaña Aranguren
    Ontology Engineering Group, School of Computer Science, Technical University of Madrid UPM, Boadilla del Monte, 28660, Spain
    J Biomed Semantics 4:2. 2013
    ..OPPL augments the ontologists' toolbox by providing a more efficient, and less error-prone, mechanism for enriching a biomedical ontology than that obtained by a manual treatment...
  2. pmc Dovetailing biology and chemistry: integrating the Gene Ontology with the ChEBI chemical ontology
    David P Hill
    Mouse Genome Informatics, The Jackson Laboratory, Bar Harbor, ME 04609, USA
    BMC Genomics 14:513. 2013
    ....
  3. pmc Uberon, an integrative multi-species anatomy ontology
    Christopher J Mungall
    Genomics Division, Lawrence Berkeley National Laboratory, 1 Cycltotron Road MS 64 121, Berkeley, CA 94720, USA
    Genome Biol 13:R5. 2012
    ..It uses novel methods for representing taxonomic variation, and has proved to be essential for translational phenotype analyses. Uberon is available at http://uberon.org...
  4. pmc ONTO-ToolKit: enabling bio-ontology engineering via Galaxy
    Erick Antezana
    Department of Biology, Norwegian University of Science and Technology NTNU, Høgskoleringen 5, N 7491 Trondheim, Norway
    BMC Bioinformatics 11:S8. 2010
    ....
  5. pmc AmiGO: online access to ontology and annotation data
    Seth Carbon
    Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA
    Bioinformatics 25:288-9. 2009
    ..AmiGO is free open source software developed and maintained by the GO Consortium...