I V Grigoriev

Summary

Affiliation: Lawrence Berkeley National Laboratory
Country: USA

Publications

  1. ncbi Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma
    Christian P Kubicek
    Area Gene Technology and Applied Biochemistry, Institute of Chemical Engineering Vienna University of Technology, Getreidemarkt 9, 1060 Vienna, Austria
    Genome Biol 12:R40. 2011
  2. ncbi The genome portal of the Department of Energy Joint Genome Institute
    Igor V Grigoriev
    Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, USA
    Nucleic Acids Res 40:D26-32. 2012
  3. ncbi Transcriptomic response of the mycoparasitic fungus Trichoderma atroviride to the presence of a fungal prey
    Verena Seidl
    Research Area Gene Technology and Applied Biochemistry, Institute of Chemical Engineering, Vienna University of Technology, Getreidemarkt 9 166, A 1060 Vienna, Austria
    BMC Genomics 10:567. 2009
  4. ncbi Exploiting proteomic data for genome annotation and gene model validation in Aspergillus niger
    James C Wright
    Dept Veterinary Preclinical Sciences, University of Liverpool, Liverpool, UK
    BMC Genomics 10:61. 2009
  5. ncbi Simulated annealing for alpha-helical protein folding: searches in vicinity of the "molten globule" state
    I V Grigoriev
    Research Institute for Genetics of Industrial Microorganisms, Moscow, Russia
    J Biomol Struct Dyn 16:115-22. 1998

Collaborators

  • Christian P Kubicek
  • Scott E Baker
  • Alfredo Herrera-Estrella
  • Susanne Zeilinger
  • Monika Schmoll
  • Erika Lindquist
  • Sabine Gruber
  • Verena Seidl
  • James C Wright
  • Enrique Monte
  • Luis D Alcaraz
  • Pedro M Coutinho
  • Elida Y Gómez-Rodríguez
  • Daniel J Ebbole
  • Hans von Döhren
  • Andrea Aerts
  • Idit Kosti
  • Nicolle Packer
  • Fanny Coulpier
  • Bernhard Seiboth
  • Olga Chertkov
  • Heather H Wilkinson
  • Erzsébet Fekete
  • Giancarlo Perrone
  • Irina S Druzhinina
  • Levente Karaffa
  • Kevin McCluskey
  • Benjamin Metz
  • Sergio Casas-Flores
  • Doris Tisch
  • Harris Shapiro
  • Nandan Deshpande
  • Mette Lübeck
  • Stephane Le Crom
  • Lea Atanasova
  • Edith E Uresti-Rivera
  • Jean Challacombe
  • Rosa Hermosa
  • Benjamin A Horwitz
  • Michael Zhang
  • Markus Omann
  • Verena Seidl-Seiboth
  • Prasun K Mukherjee
  • Cliff Han
  • Zsuzsanna Antal
  • Serenella Sukno
  • Peter S Lübeck
  • Aric Wiest
  • Antoine Margeot
  • Susan Lucas
  • Michael Thon
  • Miguel Hernández-Oñate
  • Mala Mukherjee
  • Laszlo Kredics
  • Helena Nevalainen
  • Charles M Kenerley
  • Diego A Martinez
  • Asaf Salamov
  • Mayte G Cervantes-Badillo
  • Michel Flipphi
  • Juan Antonio Tamayo-Ramos
  • Bernard Henrissat
  • Edgardo U Esquivel-Naranjo
  • Fabian Glaser
  • Monica Misra
  • Sue Francis-McIntyre
  • Deana Sugden
  • Isabel Riba-Garcia
  • Robert J Beynon
  • Jibin Sun
  • Simon J Gaskell
  • Alexeji Koptchinskiy
  • Lifu Song
  • Simon J Hubbard
  • Pedro Martinez

Detail Information

Publications5

  1. ncbi Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma
    Christian P Kubicek
    Area Gene Technology and Applied Biochemistry, Institute of Chemical Engineering Vienna University of Technology, Getreidemarkt 9, 1060 Vienna, Austria
    Genome Biol 12:R40. 2011
    ..Probably, the most studied biocontrol agents are species of the genus Hypocrea/Trichoderma...
  2. ncbi The genome portal of the Department of Energy Joint Genome Institute
    Igor V Grigoriev
    Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, USA
    Nucleic Acids Res 40:D26-32. 2012
    ..We describe here the general organization of the Genome Portal and the most recent addition, MycoCosm (http://jgi.doe.gov/fungi), a new integrated fungal genomics resource...
  3. ncbi Transcriptomic response of the mycoparasitic fungus Trichoderma atroviride to the presence of a fungal prey
    Verena Seidl
    Research Area Gene Technology and Applied Biochemistry, Institute of Chemical Engineering, Vienna University of Technology, Getreidemarkt 9 166, A 1060 Vienna, Austria
    BMC Genomics 10:567. 2009
    ..Only fragments of the biochemical processes related to this ability have been uncovered so far, however...
  4. ncbi Exploiting proteomic data for genome annotation and gene model validation in Aspergillus niger
    James C Wright
    Dept Veterinary Preclinical Sciences, University of Liverpool, Liverpool, UK
    BMC Genomics 10:61. 2009
    ....
  5. ncbi Simulated annealing for alpha-helical protein folding: searches in vicinity of the "molten globule" state
    I V Grigoriev
    Research Institute for Genetics of Industrial Microorganisms, Moscow, Russia
    J Biomol Struct Dyn 16:115-22. 1998
    ..The model was applied to several globular alpha-helical proteins and demonstrated high prediction accuracy in comparison with other known models...