Dylan Chivian

Summary

Affiliation: Lawrence Berkeley National Laboratory
Country: USA

Publications

  1. pmc GLAMM: Genome-Linked Application for Metabolic Maps
    John T Bates
    Technologies Division, DOE Joint BioEnergy Institute, Emeryville, CA 94608, USA
    Nucleic Acids Res 39:W400-5. 2011
  2. pmc Manipulation of the carbon storage regulator system for metabolite remodeling and biofuel production in Escherichia coli
    Adrienne E McKee
    Joint BioEnergy Institute, Emeryville, CA, USA
    Microb Cell Fact 11:79. 2012
  3. pmc MetaMicrobesOnline: phylogenomic analysis of microbial communities
    Dylan Chivian
    Division of Physical Biosciences, Lawrence Berkeley National Laboratory, Berkeley, CA, USA
    Nucleic Acids Res 41:D648-54. 2013
  4. doi request reprint Environmental genomics reveals a single-species ecosystem deep within Earth
    Dylan Chivian
    Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA
    Science 322:275-8. 2008
  5. pmc MicrobesOnline: an integrated portal for comparative and functional genomics
    Paramvir S Dehal
    Virtual Institute for Microbial Stress and Survival, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA
    Nucleic Acids Res 38:D396-400. 2010
  6. ncbi request reprint Genomics for environmental microbiology
    Adam M Deutschbauer
    Lawrence Berkeley National Laboratory, CA 94720, USA
    Curr Opin Biotechnol 17:229-35. 2006
  7. pmc Tracing determinants of dual substrate specificity in glycoside hydrolase family 5
    Zhiwei Chen
    Joint BioEnergy Institute, Emeryville, California 94608, USA
    J Biol Chem 287:25335-43. 2012

Collaborators

Detail Information

Publications7

  1. pmc GLAMM: Genome-Linked Application for Metabolic Maps
    John T Bates
    Technologies Division, DOE Joint BioEnergy Institute, Emeryville, CA 94608, USA
    Nucleic Acids Res 39:W400-5. 2011
    ..2010) Nucleic Acids Research, 38, D396-D400]. GLAMM is available for free to the scientific community at glamm.lbl.gov...
  2. pmc Manipulation of the carbon storage regulator system for metabolite remodeling and biofuel production in Escherichia coli
    Adrienne E McKee
    Joint BioEnergy Institute, Emeryville, CA, USA
    Microb Cell Fact 11:79. 2012
    ..coli. Therefore, we hypothesized that perturbation of the Csr system through the CsrA-CsrB ribonucleoprotein complex might increase production of biofuels and their intermediates from heterologous pathways...
  3. pmc MetaMicrobesOnline: phylogenomic analysis of microbial communities
    Dylan Chivian
    Division of Physical Biosciences, Lawrence Berkeley National Laboratory, Berkeley, CA, USA
    Nucleic Acids Res 41:D648-54. 2013
    ..Lastly, the domain browser permits rapid comparison of protein domain organization within genes of interest from metagenomes and complete microbial genomes...
  4. doi request reprint Environmental genomics reveals a single-species ecosystem deep within Earth
    Dylan Chivian
    Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA
    Science 322:275-8. 2008
    ....
  5. pmc MicrobesOnline: an integrated portal for comparative and functional genomics
    Paramvir S Dehal
    Virtual Institute for Microbial Stress and Survival, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA
    Nucleic Acids Res 38:D396-400. 2010
    ..Programmatic access to the database, along with source code and documentation, is available at http://microbesonline.org/programmers.html...
  6. ncbi request reprint Genomics for environmental microbiology
    Adam M Deutschbauer
    Lawrence Berkeley National Laboratory, CA 94720, USA
    Curr Opin Biotechnol 17:229-35. 2006
    ..This work will lead to new views on ecosystems and biological function together with the biotechnology enabled by this science...
  7. pmc Tracing determinants of dual substrate specificity in glycoside hydrolase family 5
    Zhiwei Chen
    Joint BioEnergy Institute, Emeryville, California 94608, USA
    J Biol Chem 287:25335-43. 2012
    ..Single domain multispecific GHs may be exploited for developing improved enzyme cocktails or facile engineering of microbial hosts for consolidated bioprocessing of lignocellulose...