Swapnil R Chhabra

Summary

Affiliation: Lawrence Berkeley National Laboratory
Country: USA

Publications

  1. pmc Manipulation of the carbon storage regulator system for metabolite remodeling and biofuel production in Escherichia coli
    Adrienne E McKee
    Joint BioEnergy Institute, Emeryville, CA, USA
    Microb Cell Fact 11:79. 2012
  2. pmc Towards a rigorous network of protein-protein interactions of the model sulfate reducer Desulfovibrio vulgaris Hildenborough
    Swapnil R Chhabra
    Virtual Institute of Microbial Stress and Survival, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America
    PLoS ONE 6:e21470. 2011
  3. pmc Generalized schemes for high-throughput manipulation of the Desulfovibrio vulgaris genome
    S R Chhabra
    Physical Biosciences Division, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mail Stop 978R412, Berkeley, CA 94720, USA
    Appl Environ Microbiol 77:7595-604. 2011
  4. pmc Development of a broad-host synthetic biology toolbox for ralstonia eutropha and its application to engineering hydrocarbon biofuel production
    Changhao Bi
    Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA
    Microb Cell Fact 12:107. 2013
  5. pmc Tracing determinants of dual substrate specificity in glycoside hydrolase family 5
    Zhiwei Chen
    Joint BioEnergy Institute, Emeryville, California 94608, USA
    J Biol Chem 287:25335-43. 2012
  6. doi request reprint Optimization of a heterologous mevalonate pathway through the use of variant HMG-CoA reductases
    Suzanne M Ma
    Joint BioEnergy Institute, Emeryville, CA, USA
    Metab Eng 13:588-97. 2011
  7. pmc Engineering of Ralstonia eutropha H16 for autotrophic and heterotrophic production of methyl ketones
    Jana Müller
    Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA
    Appl Environ Microbiol 79:4433-9. 2013
  8. doi request reprint Functionalizing bacterial cell surfaces with a phage protein
    Yi Chun Yeh
    Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA
    Chem Commun (Camb) 49:910-2. 2013

Collaborators

  • Nathan J Hillson
  • Harry R Beller
  • Dylan Chivian
  • Taek Soon Lee
  • Terry C Hazen
  • Morgan N Price
  • J D Keasling
  • A P Arkin
  • Yi Chun Yeh
  • Changhao Bi
  • Jana Müller
  • Steven W Singer
  • Suzanne M Ma
  • Zhiwei Chen
  • Adrienne E McKee
  • Paul D Adams
  • Gregory D Friedland
  • Christopher J Petzold
  • Daniel Maceachran
  • Peter Su
  • Noppadon Sathitsuksanoh
  • Helcio Burd
  • Sonia A Reveco
  • Harvey W Blanch
  • Kenneth L Sale
  • Blake A Simmons
  • Edward K Baidoo
  • Jeffrey A Dietrich
  • Darmawi Juminaga
  • Joshua I Park
  • Dwight Kuo
  • Michael P Thelen
  • Peter I Benke
  • Jose H Pereira
  • Becky J Rutherford
  • Rosa Chan
  • Tanveer S Batth
  • David E Garcia
  • Alyssa M Redding-Johanson
  • Rossana Chan
  • John R Haliburton

Detail Information

Publications8

  1. pmc Manipulation of the carbon storage regulator system for metabolite remodeling and biofuel production in Escherichia coli
    Adrienne E McKee
    Joint BioEnergy Institute, Emeryville, CA, USA
    Microb Cell Fact 11:79. 2012
    ..coli. Therefore, we hypothesized that perturbation of the Csr system through the CsrA-CsrB ribonucleoprotein complex might increase production of biofuels and their intermediates from heterologous pathways...
  2. pmc Towards a rigorous network of protein-protein interactions of the model sulfate reducer Desulfovibrio vulgaris Hildenborough
    Swapnil R Chhabra
    Virtual Institute of Microbial Stress and Survival, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America
    PLoS ONE 6:e21470. 2011
    ..These include the distinct role of the putative carbon monoxide-induced hydrogenase, unique electron transfer routes associated with different oxidoreductases, and the possible role of methylation in regulating sulfate reduction...
  3. pmc Generalized schemes for high-throughput manipulation of the Desulfovibrio vulgaris genome
    S R Chhabra
    Physical Biosciences Division, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Mail Stop 978R412, Berkeley, CA 94720, USA
    Appl Environ Microbiol 77:7595-604. 2011
    ....
  4. pmc Development of a broad-host synthetic biology toolbox for ralstonia eutropha and its application to engineering hydrocarbon biofuel production
    Changhao Bi
    Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA
    Microb Cell Fact 12:107. 2013
    ..While this microbial host has great potential to be engineered to produce desired compounds (beyond polyhydroxybutyrate) directly from CO2, little work has been done to develop genetic part libraries to enable such endeavors...
  5. pmc Tracing determinants of dual substrate specificity in glycoside hydrolase family 5
    Zhiwei Chen
    Joint BioEnergy Institute, Emeryville, California 94608, USA
    J Biol Chem 287:25335-43. 2012
    ..Single domain multispecific GHs may be exploited for developing improved enzyme cocktails or facile engineering of microbial hosts for consolidated bioprocessing of lignocellulose...
  6. doi request reprint Optimization of a heterologous mevalonate pathway through the use of variant HMG-CoA reductases
    Suzanne M Ma
    Joint BioEnergy Institute, Emeryville, CA, USA
    Metab Eng 13:588-97. 2011
    ..These metrics may be applied to a broad range of heterologous pathways for improving the production of biologically derived compounds...
  7. pmc Engineering of Ralstonia eutropha H16 for autotrophic and heterotrophic production of methyl ketones
    Jana Müller
    Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA
    Appl Environ Microbiol 79:4433-9. 2013
    ..Induction of the methyl ketone pathway diverted substantial carbon flux away from PHB biosynthesis and appeared to enhance carbon flux through the pathway for biosynthesis of fatty acids, which are the precursors of methyl ketones. ..
  8. doi request reprint Functionalizing bacterial cell surfaces with a phage protein
    Yi Chun Yeh
    Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA
    Chem Commun (Camb) 49:910-2. 2013
    ..This work highlights the potential for using microbe-phage interactions to generate new functions on living cells...