- ProPhylo: partial phylogenetic profiling to guide protein family construction and assignment of biological processMalay K Basu
J Craig Venter Institute, Rockville, MD 20850, USA
BMC Bioinformatics 12:434. 2011..To be its most effective, a phylogenetic profiling algorithm must be able to examine co-occurrences among protein families whose boundaries are uncertain within large homologous protein superfamilies...
- TIGRFAMs and Genome Properties in 2013Daniel H Haft
Informatics, J Craig Venter Institute, Rockville, MD 20850, USA
Nucleic Acids Res 41:D387-95. 2013..At present, 4284 models appear in TIGRFAMs, while 628 systems are described by Genome Properties. Content derives both from subsystem discovery work and from biocuration of the scientific literature...