R P Wise

Summary

Affiliation: Iowa State University
Country: USA

Publications

  1. pmc Comparative transcriptomics in the Triticeae
    Andreas W Schreiber
    Australian Centre for Plant Functional Genomics, Univ of Adelaide, PMB 1 Glen Osmond, SA 5064, Australia
    BMC Genomics 10:285. 2009
  2. pmc Towards systems genetic analyses in barley: Integration of phenotypic, expression and genotype data into GeneNetwork
    Arnis Druka
    Scottish Crop Research Institute, Invergowrie, Dundee, UK
    BMC Genet 9:73. 2008
  3. pmc Mutator-induced mutations of the rf1 nuclear fertility restorer of T-cytoplasm maize alter the accumulation of T-urf13 mitochondrial transcripts
    R P Wise
    USDA Agricultural Research Service, Iowa State University, Ames 50011, USA
    Genetics 143:1383-94. 1996
  4. ncbi request reprint Mitochondrial transcript processing and restoration of male fertility in T-cytoplasm maize
    R P Wise
    USDA ARS, Department of Plant Pathology, Iowa State University, Ames 50011 1020, USA
    J Hered 90:380-5. 1999
  5. pmc Nuclear-mediated mitochondrial gene regulation and male fertility in higher plants: Light at the end of the tunnel?
    Roger P Wise
    U S Department of Agriculture Agricultural Research Service, Corn Insects and Crop Genetics Unit, Department of Plant Pathology, Iowa State University, Ames, IA 50011, USA
    Proc Natl Acad Sci U S A 99:10240-2. 2002
  6. ncbi request reprint Transcript profiling in host-pathogen interactions
    Roger P Wise
    Corn Insects and Crop Genetics Research, USDA ARS, Iowa State University, Ames, Iowa 50011 1020, USA
    Annu Rev Phytopathol 45:329-69. 2007
  7. ncbi request reprint The rf2 nuclear restorer gene of male-sterile T-cytoplasm maize
    X Cui
    Department of Zoology and Genetics, Iowa State University, Ames, 50011, USA
    Science 272:1334-6. 1996
  8. ncbi request reprint The MLA6 coiled-coil, NBS-LRR protein confers AvrMla6-dependent resistance specificity to Blumeria graminis f. sp. hordei in barley and wheat
    D Halterman
    Corn Insects and Crop Genetics Research, USDA-ARS, Iowa State University, Ames, IA 50011-1020 USA
    Plant J 25:335-48. 2001
  9. pmc Blufensin1 negatively impacts basal defense in response to barley powdery mildew
    Yan Meng
    Department of Plant Pathology, Iowa State University, Ames, Iowa 50011 1020, USA
    Plant Physiol 149:271-85. 2009
  10. pmc Interaction-dependent gene expression in Mla-specified response to barley powdery mildew
    Rico A Caldo
    Department of Plant Pathology and Center for Plant Responses to Environmental Stresses, Iowa State University, Ames, Iowa 50011 1020, USA
    Plant Cell 16:2514-28. 2004

Collaborators

  • D Nettleton
  • P S Schnable
  • Dennis A Halterman
  • Adam J Bogdanove
  • Steven A Whitham
  • P Schulze-Lefert
  • VIRGINIA E WALBOT
  • Robbie Waugh
  • Paula Casati
  • Matias Kirst
  • Rico A Caldo
  • Arnis Druka
  • Yan Meng
  • Pingsha Hu
  • Brent A Kronmiller
  • Timothy J Close
  • Andris Kleinhofs
  • Andreas W Schreiber
  • Liu Xi
  • Matthew J Moscou
  • Brian J Steffenson
  • Robert W Williams
  • David F Marshall
  • Elena Potokina
  • Michael J Kearsey
  • Ilze Druka
  • Zewei Luo
  • Nicola Bonar
  • Gary J Muehlbauer
  • Lishuang Shen
  • Julie A Dickerson
  • Rod A Wing
  • Fusheng Wei
  • Weihui Xu
  • Ben Lovell
  • Miranda Shaver
  • Elena Kalashyan
  • Peter Langridge
  • Gwenda Mayo
  • Tim Sutton
  • Ute Baumann
  • G√ľnther F Schweizer
  • Arthur G Centeno
  • Zhaohui Sun
  • William T B Thomas
  • Carola Wagner
  • Steven E Ullrich
  • Hongqiang Li
  • Ling Zhang
  • Jiqing Peng
  • Jian Gong
  • Dianne Cook
  • Stacy M Turner
  • Daniel A Ashlock
  • Steve I Wanamaker
  • X Cui

Detail Information

Publications24

  1. pmc Comparative transcriptomics in the Triticeae
    Andreas W Schreiber
    Australian Centre for Plant Functional Genomics, Univ of Adelaide, PMB 1 Glen Osmond, SA 5064, Australia
    BMC Genomics 10:285. 2009
    ..The advent of two genome-scale Affymetrix GeneChips now allows studies of the comparison of their transcriptomes...
  2. pmc Towards systems genetic analyses in barley: Integration of phenotypic, expression and genotype data into GeneNetwork
    Arnis Druka
    Scottish Crop Research Institute, Invergowrie, Dundee, UK
    BMC Genet 9:73. 2008
    ....
  3. pmc Mutator-induced mutations of the rf1 nuclear fertility restorer of T-cytoplasm maize alter the accumulation of T-urf13 mitochondrial transcripts
    R P Wise
    USDA Agricultural Research Service, Iowa State University, Ames 50011, USA
    Genetics 143:1383-94. 1996
    ..The ability to obtain rf1-m derivatives from Rf1 indicates that Rf1 alleles produce a functional gene product necessary for the accumulation of specific T-urf13 transcripts in T-cytoplasm maize...
  4. ncbi request reprint Mitochondrial transcript processing and restoration of male fertility in T-cytoplasm maize
    R P Wise
    USDA ARS, Department of Plant Pathology, Iowa State University, Ames 50011 1020, USA
    J Hered 90:380-5. 1999
    ..These tools will provide a foundation for determining mechanisms of nuclear-directed mitochondrial RNA processing and fertility restoration...
  5. pmc Nuclear-mediated mitochondrial gene regulation and male fertility in higher plants: Light at the end of the tunnel?
    Roger P Wise
    U S Department of Agriculture Agricultural Research Service, Corn Insects and Crop Genetics Unit, Department of Plant Pathology, Iowa State University, Ames, IA 50011, USA
    Proc Natl Acad Sci U S A 99:10240-2. 2002
  6. ncbi request reprint Transcript profiling in host-pathogen interactions
    Roger P Wise
    Corn Insects and Crop Genetics Research, USDA ARS, Iowa State University, Ames, Iowa 50011 1020, USA
    Annu Rev Phytopathol 45:329-69. 2007
    ..In this way, genomic technologies have facilitated a system-wide approach to unifying themes and unique features in the interactions of hosts and pathogens...
  7. ncbi request reprint The rf2 nuclear restorer gene of male-sterile T-cytoplasm maize
    X Cui
    Department of Zoology and Genetics, Iowa State University, Ames, 50011, USA
    Science 272:1334-6. 1996
    ....
  8. ncbi request reprint The MLA6 coiled-coil, NBS-LRR protein confers AvrMla6-dependent resistance specificity to Blumeria graminis f. sp. hordei in barley and wheat
    D Halterman
    Corn Insects and Crop Genetics Research, USDA-ARS, Iowa State University, Ames, IA 50011-1020 USA
    Plant J 25:335-48. 2001
    ..Our findings demonstrate that highly related CC-NBS-LRR proteins encoded by alleles of the Mla locus can dictate similar powdery mildew resistance phenotypes yet still require distinct downstream signaling components...
  9. pmc Blufensin1 negatively impacts basal defense in response to barley powdery mildew
    Yan Meng
    Department of Plant Pathology, Iowa State University, Ames, Iowa 50011 1020, USA
    Plant Physiol 149:271-85. 2009
    ..Collectively, these data suggest that the grass-specific Bln1 negatively impacts basal defense against Bgh...
  10. pmc Interaction-dependent gene expression in Mla-specified response to barley powdery mildew
    Rico A Caldo
    Department of Plant Pathology and Center for Plant Responses to Environmental Stresses, Iowa State University, Ames, Iowa 50011 1020, USA
    Plant Cell 16:2514-28. 2004
    ....
  11. doi request reprint Functional contribution of chorismate synthase, anthranilate synthase, and chorismate mutase to penetration resistance in barley-powdery mildew interactions
    Pingsha Hu
    Interdepartmental Genetics Program, Department of Plant Pathology and Center for Plant Responses to Environmental Stresses, Iowa State University, Ames 50011 1020, USA
    Mol Plant Microbe Interact 22:311-20. 2009
    ..graminis f. sp. hordei development in Mla-mediated, barley-powdery mildew interactions...
  12. pmc Transcript-based cloning of RRP46, a regulator of rRNA processing and R gene-independent cell death in barley-powdery mildew interactions
    Liu Xi
    Department of Plant Pathology and Center for Plant Responses to Environmental Stresses, Iowa State University, Ames, Iowa 50011 1020, USA
    Plant Cell 21:3280-95. 2009
    ....
  13. ncbi request reprint Stage-specific suppression of basal defense discriminates barley plants containing fast- and delayed-acting Mla powdery mildew resistance alleles
    Rico A Caldo
    Department of Plant Pathology, Center for Plant Responses to Environmental Stresses, USDA ARS, Iowa State University, Ames, IA 50011, USA
    Mol Plant Microbe Interact 19:939-47. 2006
    ..Thus, we hypothesize that the regulation of basal defense influences host-cell accessibility to the fungal pathogen and drives allelic diversification of gene-specific resistance phenotypes...
  14. pmc Genome dynamics and evolution of the Mla (powdery mildew) resistance locus in barley
    Fusheng Wei
    Interdepartmental Genetics Program and Department of Plant Pathology, Iowa State University, Ames, IA 50011 1020, USA
    Plant Cell 14:1903-17. 2002
    ..We present a model for the evolution of the Mla region that encompasses several emerging features of large cereal genomes...
  15. pmc Powdery mildew-induced Mla mRNAs are alternatively spliced and contain multiple upstream open reading frames
    Dennis A Halterman
    Corn Insects and Crop Genetics Research, United States Department of Agriculture Agricultural Research Service, Iowa State University, Ames, Iowa 50011 1020, USA
    Plant Physiol 131:558-67. 2003
    ..The sudden increase in specific transcript levels could account for the rapid defense response phenotype conferred by Mla6 and Mla13...
  16. ncbi request reprint A single-amino acid substitution in the sixth leucine-rich repeat of barley MLA6 and MLA13 alleviates dependence on RAR1 for disease resistance signaling
    Dennis A Halterman
    Corn Insects and Crop Genetics Research, USDA ARS, Department of Plant Pathology, and Center for Plant Responses to Environmental Stresses, Iowa State University, Ames, IA 50011 1020, USA
    Plant J 38:215-26. 2004
    ..These results demonstrate that a single-amino acid substitution in the sixth MLA LRR can alter host signaling but not resistance specificity to B. graminis...
  17. pmc BarleyBase--an expression profiling database for plant genomics
    Lishuang Shen
    Virtual Reality Applications Center, USDA ARS, Iowa State University, Ames, IA 50011, USA
    Nucleic Acids Res 33:D614-8. 2005
    ....
  18. doi request reprint Diversification of Lrk/Tak kinase gene clusters is associated with subfunctionalization and cultivar-specific transcript accumulation in barley
    Pingsha Hu
    Interdepartmental Genetics Program, Department of Plant Pathology and Center for Plant Responses to Environmental Stresses, Iowa State University, Ames, IA 50011 1020, USA
    Funct Integr Genomics 8:199-209. 2008
    ....
  19. ncbi request reprint BarleyBase/PLEXdb
    Roger P Wise
    Corn Insects and Crop Genetics Research, USDA ARS and Department of Plant Pathology and Center for Plant Responses to Environmental Stresses, Iowa State University, Ames, IA, USA
    Methods Mol Biol 406:347-63. 2007
    ....
  20. pmc TEnest: automated chronological annotation and visualization of nested plant transposable elements
    Brent A Kronmiller
    Bioinformatics and Computational Biology, Department of Plant Pathology and Center for Plant Responses to Environmental Stresses, Iowa State University, Ames, IA 50011 1020, USA
    Plant Physiol 146:45-59. 2008
    ..The TEnest software package is available for use on PlantGDB under the tools section (http://www.plantgdb.org/prj/TE_nest/TE_nest.html); the source code is available from (http://wiselab.org)...
  21. pmc Computational finishing of large sequence contigs reveals interspersed nested repeats and gene islands in the rf1-associated region of maize
    Brent A Kronmiller
    Bioinformatics and Computational Biology, Iowa State University, Ames, Iowa 50011 1020, USA
    Plant Physiol 151:483-95. 2009
    ..Collinear genes on single gene islands show that while most expansion of the maize genome has occurred in the repeat clusters, gene islands are not immune and have experienced growth in both intragene and intergene locations...
  22. doi request reprint Exploiting regulatory variation to identify genes underlying quantitative resistance to the wheat stem rust pathogen Puccinia graminis f. sp. tritici in barley
    Arnis Druka
    Genetics Programme, Scottish Crop Research Institute, Invergowrie, Dundee, DD2 5DA, UK
    Theor Appl Genet 117:261-72. 2008
    ....
  23. pmc A new resource for cereal genomics: 22K barley GeneChip comes of age
    Timothy J Close
    Department of Botany and Plant Sciences, University of California, Riverside, California 92521, USA
    Plant Physiol 134:960-8. 2004
    ..We expect that this first generation array will accelerate hypothesis generation and gene discovery in disease defense pathways, responses to abiotic stresses, development, and evolutionary diversity in monocot plants...
  24. ncbi request reprint Genetic diversity contribution to errors in short oligonucleotide microarray analysis
    Matias Kirst
    Institute for Genomic Diversity, Cornell University, Ithaca, NY 14853 2703, USA
    Plant Biotechnol J 4:489-98. 2006
    ..This analysis identified 36,196 probes in 5118 probesets containing markers that may be used for genotyping in natural and segregating populations for association gene analysis and genetic mapping...