- Phasing of many thousands of genotyped samplesAmy L Williams
Department of Genetics, Harvard Medical School, Boston, MA 02115, USA Broad Institute of Harvard and MIT, Cambridge, MA 02142, USA
Am J Hum Genet 91:238-51. 2012..Lastly, we show that HAPI-UR has better runtime scaling properties than does Beagle so that for larger data sets, HAPI-UR will be practical and will have an even larger runtime advantage. HAPI-UR is available online (see Web Resources)...
- Rapid haplotype inference for nuclear familiesAmy L Williams
Computer Science and Artificial Intelligence Laboratory, Massachusetts Institute of Technology, 32 Vassar Street, Cambridge, MA 02139, USA
Genome Biol 11:R108. 2010..Because Hapi infers both minimum-recombinant and maximum likelihood haplotypes and applies to related individuals, the haplotypes it infers are highly accurate over extended genomic distances...