Andrew M Shedlock

Summary

Affiliation: Harvard University
Country: USA

Publications

  1. ncbi Evolutionary history of anglerfishes (Teleostei: Lophiiformes): a mitogenomic perspective
    Masaki Miya
    Natural History Museum and Institute, Chiba, 955 2 Aoba cho, Chuo Ku, Chiba 260 8682, Japan
    BMC Evol Biol 10:58. 2010
  2. ncbi Phylogenomic investigation of CR1 LINE diversity in reptiles
    Andrew M Shedlock
    Department of Organismic and Evolutionary Biology, Museum of Comparative Zoology, Harvard University, 26 Oxford Street, Cambridge, Massachusetts 02138, USA
    Syst Biol 55:902-11. 2006
  3. ncbi Phylogenomics of nonavian reptiles and the structure of the ancestral amniote genome
    Andrew M Shedlock
    Department of Organismic and Evolutionary Biology, Museum of Comparative Zoology, Harvard University, 26 Oxford Street, Cambridge, MA 02138, USA
    Proc Natl Acad Sci U S A 104:2767-72. 2007
  4. ncbi Exploring frontiers in the DNA landscape: an introduction to the symposium "Genome Analysis and the Molecular Systematics of Retroelements"
    Andrew M Shedlock
    Department of Organismic and Evolutionary Biology, Museum of Comparative Zoology, Harvard University, 26 Oxford Street, Cambridge, Massachusetts 02138, USA
    Syst Biol 55:871-4. 2006
  5. ncbi Genome evolution in Reptilia, the sister group of mammals
    DANIEL E JANES
    Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA
    Annu Rev Genomics Hum Genet 11:239-64. 2010
  6. ncbi Amniote phylogenomics: testing evolutionary hypotheses with BAC library scanning and targeted clone analysis of large-scale DNA sequences from reptiles
    Andrew M Shedlock
    Department of Organismic and Evolutionary Biology and Museum of Comparative Zoology, Harvard University, Cambridge, MA
    Methods Mol Biol 422:91-117. 2008
  7. ncbi Phylogenetics of modern birds in the era of genomics
    Scott V Edwards
    Department of Organismic and Evolutionary Biology and Museum of Comparative Zoology, Harvard University, 26 Oxford Street, Cambridge, MA 02138, USA
    Proc Biol Sci 272:979-92. 2005
  8. ncbi Origin of avian genome size and structure in non-avian dinosaurs
    Chris L Organ
    Museum of Comparative Zoology, Harvard University, 26 Oxford Street, Cambridge, Massachusetts 02138, USA
    Nature 446:180-4. 2007
  9. ncbi Palaeogenomics of pterosaurs and the evolution of small genome size in flying vertebrates
    Chris L Organ
    Department of Organismic and Evolutionary Biology, Harvard University, 26 Oxford Street, Cambridge, MA 02138, USA
    Biol Lett 5:47-50. 2009
  10. ncbi The genome of the green anole lizard and a comparative analysis with birds and mammals
    Jessica Alföldi
    Broad Institute of MIT and Harvard, Cambridge, Massachusetts 02142, USA
    Nature 477:587-91. 2011

Detail Information

Publications11

  1. ncbi Evolutionary history of anglerfishes (Teleostei: Lophiiformes): a mitogenomic perspective
    Masaki Miya
    Natural History Museum and Institute, Chiba, 955 2 Aoba cho, Chuo Ku, Chiba 260 8682, Japan
    BMC Evol Biol 10:58. 2010
    ..Sequences of 77 higher teleosts including the 39 lophiiform sequences were unambiguously aligned and subjected to phylogenetic analysis and divergence time estimation...
  2. ncbi Phylogenomic investigation of CR1 LINE diversity in reptiles
    Andrew M Shedlock
    Department of Organismic and Evolutionary Biology, Museum of Comparative Zoology, Harvard University, 26 Oxford Street, Cambridge, Massachusetts 02138, USA
    Syst Biol 55:902-11. 2006
    ....
  3. ncbi Phylogenomics of nonavian reptiles and the structure of the ancestral amniote genome
    Andrew M Shedlock
    Department of Organismic and Evolutionary Biology, Museum of Comparative Zoology, Harvard University, 26 Oxford Street, Cambridge, MA 02138, USA
    Proc Natl Acad Sci U S A 104:2767-72. 2007
    ..The sequences reported in this paper have been deposited in the GenBank database (accession nos. CZ 250707-CZ 257443 and DX 390731-DX 389174)...
  4. ncbi Exploring frontiers in the DNA landscape: an introduction to the symposium "Genome Analysis and the Molecular Systematics of Retroelements"
    Andrew M Shedlock
    Department of Organismic and Evolutionary Biology, Museum of Comparative Zoology, Harvard University, 26 Oxford Street, Cambridge, Massachusetts 02138, USA
    Syst Biol 55:871-4. 2006
    ..Contributions of each article are briefly discussed in this context and particularly fruitful directions for future research illuminated by results of this symposium are reviewed...
  5. ncbi Genome evolution in Reptilia, the sister group of mammals
    DANIEL E JANES
    Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA
    Annu Rev Genomics Hum Genet 11:239-64. 2010
    ..Reptilia exhibit a wide range of evolutionary rates of different subgenomes and, from isochores to mitochondrial DNA, provide a critical contrast to the genomic paradigms established in mammals...
  6. ncbi Amniote phylogenomics: testing evolutionary hypotheses with BAC library scanning and targeted clone analysis of large-scale DNA sequences from reptiles
    Andrew M Shedlock
    Department of Organismic and Evolutionary Biology and Museum of Comparative Zoology, Harvard University, Cambridge, MA
    Methods Mol Biol 422:91-117. 2008
    ..Taken together, the genome scanning and shotgun sequencing techniques offer complementary diagnostic potential and can substantially increase the scale and power of analyses aimed at testing evolutionary hypotheses for nonmodel species...
  7. ncbi Phylogenetics of modern birds in the era of genomics
    Scott V Edwards
    Department of Organismic and Evolutionary Biology and Museum of Comparative Zoology, Harvard University, 26 Oxford Street, Cambridge, MA 02138, USA
    Proc Biol Sci 272:979-92. 2005
    ....
  8. ncbi Origin of avian genome size and structure in non-avian dinosaurs
    Chris L Organ
    Museum of Comparative Zoology, Harvard University, 26 Oxford Street, Cambridge, Massachusetts 02138, USA
    Nature 446:180-4. 2007
    ..These genomic characteristics should be added to the list of attributes previously considered avian but now thought to have arisen in non-avian dinosaurs, such as feathers, pulmonary innovations, and parental care and nesting...
  9. ncbi Palaeogenomics of pterosaurs and the evolution of small genome size in flying vertebrates
    Chris L Organ
    Department of Organismic and Evolutionary Biology, Harvard University, 26 Oxford Street, Cambridge, MA 02138, USA
    Biol Lett 5:47-50. 2009
    ..We predict that, similar to the pattern seen in theropod dinosaurs, genome-size contraction preceded flight in pterosaurs and bats...
  10. ncbi The genome of the green anole lizard and a comparative analysis with birds and mammals
    Jessica Alföldi
    Broad Institute of MIT and Harvard, Cambridge, Massachusetts 02142, USA
    Nature 477:587-91. 2011
    ..Comparative gene analysis shows that amniote egg proteins have evolved significantly more rapidly than other proteins. An anole phylogeny resolves basal branches to illuminate the history of their repeated adaptive radiations...
  11. ncbi Retroposon mapping in molecular systematics
    Norihiro Okada
    Faculty of Bioscience and Biotechnology, Tokyo Institute of Technology, Yokohama, Japan
    Methods Mol Biol 260:189-226. 2004
    ..Major steps in the experimental process are illustrated with case examples from a diversity of taxonomic groups and by published results in the molecular biology and systematics literature...