Research Topics
| Charles C DavisSummaryAffiliation: Harvard University Country: USA Publications
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Publications
Plant evolution: pulses of extinction and speciation in gymnosperm diversityCharles C Davis
Department of Organismic and Evolutionary Biology, Harvard University, Herbaria, Cambridge, MA 02138, USA
Curr Biol 21:R995-8. 2011..Two recent studies find that recent pulses of extinction and speciation have shaped today's gymnosperm diversity, contradicting the widespread assumption that gymnosperms have remained largely unchanged for tens of millions of years...
Laurasian migration explains Gondwanan disjunctions: evidence from MalpighiaceaeCharles C Davis
Department of Organismic and Evolutionary Biology, Harvard University Herbaria, 22 Divinity Avenue, Cambridge, MA 02138, USA
Proc Natl Acad Sci U S A 99:6833-7. 2002..This Laurasian migration route may explain many other extant lineages that exhibit western Gondwanan distributions...
The importance of phylogeny to the study of phenological response to global climate changeCharles C Davis
Department of Organismic and Evolutionary Biology, Harvard University Herbaria, 22 Divinity Ave, Cambridge, MA 02138, USA
Philos Trans R Soc Lond B Biol Sci 365:3201-13. 2010..These results illustrate the ways in which phylogenetic thinking can aid in making generalizations of practical importance and enhance efforts to predict species' responses to future climate change...
Gene transfer from a parasitic flowering plant to a fernCharles C Davis
Harvard University Herbaria, Department of Organismic and Evolutionary Biology, 22 Divinity Avenue, Cambridge, MA 02138, USA
Proc Biol Sci 272:2237-42. 2005..virginianum, and that the latter may have happened very rapidly. This is the first report of HGT from an angiosperm to a fern, through either direct parasitism or the mediation of interconnecting fungal symbionts...
Floral gigantism in RafflesiaceaeCharles C Davis
Department of Organismic and Evolutionary Biology, Harvard University Herbaria, 22 Divinity Avenue, Cambridge, MA 02138, USA
Science 315:1812. 2007..Given the inferred phylogeny, we estimate that there was a circa 79-fold increase in flower diameter on the stem lineage of Rafflesiaceae, making this one of the most dramatic cases of size evolution reported for eukaryotes...
The evolution of floral gigantismCharles C Davis
Department of Organismic and Evolutionary Biology, Harvard University Herbaria, 22 Divinity Avenue, Cambridge, MA 02138, USA
Curr Opin Plant Biol 11:49-57. 2008..Future phylogenetic tests of these hypotheses should be conducted to determine if the transition to such pollination systems correlates with significant changes in the mode and tempo of blossom size evolution...
Floral evolution: dramatic size change was recent and rapid in the world's largest flowersCharles C Davis
Department of Organismic and Evolutionary Biology, Harvard University Herbaria, 22 Divinity Avenue, Cambridge, MA 02138, USA
Curr Biol 18:R1102-4. 2008..New data now suggest that floral size evolution within Rafflesiaceae may be more dynamic than expected, with both recent and rapid changes in flower size...
Phylogenomics and a posteriori data partitioning resolve the Cretaceous angiosperm radiation MalpighialesZhenxiang Xi
Department of Organismic and Evolutionary Biology, Harvard University Herbaria, Cambridge, MA 02138, USA
Proc Natl Acad Sci U S A 109:17519-24. 2012..These approaches are likely to help improve phylogenetic resolution in other poorly resolved major clades of angiosperms and to be more broadly useful in studies across the Tree of Life...
Favorable climate change response explains non-native species' success in Thoreau's woodsCharles G Willis
Department of Organismic and Evolutionary Biology, Harvard University Herbaria, Cambridge, Massachusetts, United States of America
PLoS ONE 5:e8878. 2010..This demonstrates that climate change has likely played, and may continue to play, an important role in facilitating non-native species naturalization and invasion at the community level...
Similar genetic mechanisms underlie the parallel evolution of floral phenotypesWenheng Zhang
Department of Organismic and Evolutionary Biology, Harvard University Herbaria, Cambridge, Massachusetts, USA
PLoS ONE 7:e36033. 2012..These results indicate that similar floral phenotypes in this large angiosperm clade have evolved via parallel genetic changes from an otherwise highly conserved developmental program...
Phylogenetic patterns of species loss in Thoreau's woods are driven by climate changeCharles G Willis
Department of Organismic and Evolutionary Biology, Harvard University Herbaria, 22 Divinity Avenue, Cambridge, MA 02138, USA
Proc Natl Acad Sci U S A 105:17029-33. 2008....
Phylogeny of the clusioid clade (Malpighiales): evidence from the plastid and mitochondrial genomesBrad R Ruhfel
Department of Organismic and Evolutionary Biology, Harvard University Herbaria, 22 Divinity Avenue, Cambridge, Massachusetts 02138, USA
Am J Bot 98:306-25. 2011..We conducted a taxon-rich multigene phylogenetic analysis of the clusioids to clarify phylogenetic relationships in this clade...
Massive mitochondrial gene transfer in a parasitic flowering plant cladeZhenxiang Xi
Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, Massachusetts, USA
PLoS Genet 9:e1003265. 2013..This may represent a more general pattern for other parasitic plant clades and perhaps more broadly for angiosperms...
Horizontal transfer of expressed genes in a parasitic flowering plantZhenxiang Xi
Department of Organismic and Evolutionary Biology, Harvard University Herbaria, Cambridge, MA 02138, USA
BMC Genomics 13:227. 2012..Studies of HGT in parasitic plants have relied largely on the fortuitous discovery of gene phylogenies that indicate HGT, and no broad systematic search for HGT has been undertaken in parasitic systems where it is most expected to occur...
Floral symmetry genes and the origin and maintenance of zygomorphy in a plant-pollinator mutualismWenheng Zhang
Department of Organismic and Evolutionary Biology, Harvard University Herbaria, Cambridge, MA 02138, USA
Proc Natl Acad Sci U S A 107:6388-93. 2010..We consider three evolutionary models that may have given rise to this patterning, including the hypothesis that floral zygomorphy in Malpighiaceae arose earlier than standard morphology-based character reconstructions suggest...
A complete generic phylogeny of Malpighiaceae inferred from nucleotide sequence data and morphologyCharles C Davis
Department of Organismic and Evolutionary Biology, Harvard University Herbaria, 22 Divinity Avenue, Cambridge, Massachusetts 02138 USA
Am J Bot 97:2031-48. 2010....
Explosive radiation of Malpighiales supports a mid-cretaceous origin of modern tropical rain forestsCharles C Davis
Department of Ecology and Evolutionary Biology, University of Michigan Herbarium, Ann Arbor, Michigan 48108 2287, USA
Am Nat 165:E36-65. 2005..This case illustrates that dated phylogenies can provide an important new source of evidence bearing on the timing of major environmental changes, which may be especially useful when fossil evidence is limited or controversial...
Host-to-parasite gene transfer in flowering plants: phylogenetic evidence from MalpighialesCharles C Davis
Ecology and Evolutionary Biology, University of Michigan Herbarium, 3600 Varsity Drive, Ann Arbor, MI 48108 2287, USA
Science 305:676-8. 2004..These discordant phylogenetic hypotheses strongly suggest that part of the mitochondrial genome in Rafflesiaceae was acquired via HGT from their hosts...
Phylogeny of Acridocarpus-Brachylophon (Malpighiaceae): implications for tertiary tropical floras and Afroasian biogeographyCharles C Davis
Department of Ecology and Evolutionary Biology, University of Michigan Herbarium, 3600 Varsity Drive, Ann Arbor, Michigan 48108 2287, USA
Evolution 56:2395-405. 2002..Although the spread of xeric environments resulted in the extinction of many African plant groups, our data suggest that for others it provided an opportunity for further diversification...
The deepest divergences in land plants inferred from phylogenomic evidenceYin Long Qiu
Department of Ecology and Evolutionary Biology, University Herbarium, University of Michigan, Ann Arbor, MI 48109 1048, USA
Proc Natl Acad Sci U S A 103:15511-6. 2006..In particular, it is shown here that densely sampled taxon trees built with multiple genes provide an indispensable test of taxon-sparse trees inferred from genome sequences...
