Tim Clark

Summary

Affiliation: Harvard University
Country: USA

Publications

  1. pmc Open semantic annotation of scientific publications using DOMEO
    Paolo Ciccarese
    Harvard Medical School and Massachusetts General Hospital, Boston MA, USA
    J Biomed Semantics 3:S1. 2012
  2. pmc An open annotation ontology for science on web 3.0
    Paolo Ciccarese
    Harvard Medical School and Massachusetts General Hospital, Boston MA, USA
    J Biomed Semantics 2:S4. 2011
  3. pmc eXframe: reusable framework for storage, analysis and visualization of genomics experiments
    Amit U Sinha
    Department of Pediatric Oncology, Dana Farber Cancer Institute and Harvard Medical School, Boston, MA 02115, USA
    BMC Bioinformatics 12:452. 2011
  4. pmc Advancing translational research with the Semantic Web
    Alan Ruttenberg
    Millennium Pharmaceuticals, Cambridge, MA, USA
    BMC Bioinformatics 8:S2. 2007
  5. pmc AlzPharm: integration of neurodegeneration data using RDF
    Hugo Y K Lam
    Interdepartmental Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA
    BMC Bioinformatics 8:S4. 2007
  6. ncbi Clinical outcome in patients with bipolar I disorder, obsessive compulsive disorder or both
    Franca Centorrino
    Schizophrenia and Bipolar Disorder Program, McLean Hospital, Belmont 02478, and Department of Psychiatry, Harvard Medical School, Cambridge, MA, USA
    Hum Psychopharmacol 21:189-93. 2006
  7. doi Building biomedical web communities using a semantically aware content management system
    Sudeshna Das
    Initiative in Innovative Computing, Harvard University, 60 Oxford Street, Cambridge, MA, USA
    Brief Bioinform 10:129-38. 2009

Collaborators

  • Sudeshna Das
  • John Hennen
  • Franca Centorrino
  • Paolo Ciccarese
  • Marco Ocana
  • Amit U Sinha
  • Elizabeth Wu
  • Kei Hoi Cheung
  • Hugo Y K Lam
  • June Kinoshita
  • Yong Gao
  • Alan Ruttenberg
  • Gwendolyn T Wong
  • Susie Stephens
  • Leyla Jael Garcia Castro
  • Emily Merrill
  • Scott A Armstrong
  • Chiquito Crasto
  • Tonya Hongsermeier
  • Joanne Luciano
  • Davide Zaccagnini
  • Jonathan Rees
  • William Bug
  • Thomas Morse
  • Nian Liu
  • Donald Doherty
  • Luis Marenco
  • Matthias Samwald
  • Eric Neumann
  • Gordon Shepherd
  • Kerstin Forsberg
  • Helen Chen
  • Ivan Herman
  • M Scott Marshall
  • Chimezie Ogbuji
  • Perry Miller
  • Vipul Kashyap
  • Olivier Bodenreider

Detail Information

Publications7

  1. pmc Open semantic annotation of scientific publications using DOMEO
    Paolo Ciccarese
    Harvard Medical School and Massachusetts General Hospital, Boston MA, USA
    J Biomed Semantics 3:S1. 2012
    ..Our group has developed a useful shared software framework for performing, versioning, sharing and viewing Web annotations of a number of kinds, using an open representation model...
  2. pmc An open annotation ontology for science on web 3.0
    Paolo Ciccarese
    Harvard Medical School and Massachusetts General Hospital, Boston MA, USA
    J Biomed Semantics 2:S4. 2011
    ....
  3. pmc eXframe: reusable framework for storage, analysis and visualization of genomics experiments
    Amit U Sinha
    Department of Pediatric Oncology, Dana Farber Cancer Institute and Harvard Medical School, Boston, MA 02115, USA
    BMC Bioinformatics 12:452. 2011
    ..Moreover, many of them are tailored for a single type of technology or measurement and do not support the integration of multiple data types...
  4. pmc Advancing translational research with the Semantic Web
    Alan Ruttenberg
    Millennium Pharmaceuticals, Cambridge, MA, USA
    BMC Bioinformatics 8:S2. 2007
    ....
  5. pmc AlzPharm: integration of neurodegeneration data using RDF
    Hugo Y K Lam
    Interdepartmental Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA
    BMC Bioinformatics 8:S4. 2007
    ....
  6. ncbi Clinical outcome in patients with bipolar I disorder, obsessive compulsive disorder or both
    Franca Centorrino
    Schizophrenia and Bipolar Disorder Program, McLean Hospital, Belmont 02478, and Department of Psychiatry, Harvard Medical School, Cambridge, MA, USA
    Hum Psychopharmacol 21:189-93. 2006
    ..Bipolar disorder (BPD) is often comorbid with obsessive-compulsive (OCD) and other anxiety disorders, but the impact of such comorbidity on long-term outcome has not been evaluated systematically...
  7. doi Building biomedical web communities using a semantically aware content management system
    Sudeshna Das
    Initiative in Innovative Computing, Harvard University, 60 Oxford Street, Cambridge, MA, USA
    Brief Bioinform 10:129-38. 2009
    ..We expect it to be particularly beneficial in highly interdisciplinary areas, such as neurodegenerative disease and neurorepair research, as well as having broad utility across the natural sciences...