Shuo Jiao

Summary

Affiliation: Fred Hutchinson Cancer Research Center
Country: USA

Publications

  1. ncbi Genome-wide search for gene-gene interactions in colorectal cancer
    Shuo Jiao
    Public Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America
    PLoS ONE 7:e52535. 2012
  2. ncbi Probabilistic peak calling and controlling false discovery rate estimations in transcription factor binding site mapping from ChIP-seq
    Shuo Jiao
    Fred Hutchinson Cancer Institute, Seattle, WA, USA
    Methods Mol Biol 674:161-77. 2010
  3. ncbi The use of imputed values in the meta-analysis of genome-wide association studies
    Shuo Jiao
    Cancer Prevention Program, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA
    Genet Epidemiol 35:597-605. 2011
  4. ncbi Identification of Genetic Susceptibility Loci for Colorectal Tumors in a Genome-Wide Meta-analysis
    Ulrike Peters
    Public Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109 1024, USA
    Gastroenterology 144:799-807.e24. 2013
  5. ncbi Meta-analysis of new genome-wide association studies of colorectal cancer risk
    Ulrike Peters
    Cancer Prevention Program, Fred Hutchinson Cancer Research Center, Seattle, USA
    Hum Genet 131:217-34. 2012
  6. ncbi A pooled analysis of smoking and colorectal cancer: timing of exposure and interactions with environmental factors
    Jian Gong
    Public Health Sciences Division, Fred Hutchinson Cancer Research Center, University of Washington, Seattle, WA 98109, USA
    Cancer Epidemiol Biomarkers Prev 21:1974-85. 2012
  7. ncbi Characterization of gene-environment interactions for colorectal cancer susceptibility loci
    Carolyn M Hutter
    Public Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA
    Cancer Res 72:2036-44. 2012
  8. ncbi A systematic mapping approach of 16q12.2/FTO and BMI in more than 20,000 African Americans narrows in on the underlying functional variation: results from the Population Architecture using Genomics and Epidemiology (PAGE) study
    Ulrike Peters
    Division of Public Health Sciences, Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America
    PLoS Genet 9:e1003171. 2013
  9. ncbi Powerful cocktail methods for detecting genome-wide gene-environment interaction
    Li Hsu
    Biostatistics and Biomathematics Program, Public Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109, USA
    Genet Epidemiol 36:183-94. 2012

Detail Information

Publications9

  1. ncbi Genome-wide search for gene-gene interactions in colorectal cancer
    Shuo Jiao
    Public Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America
    PLoS ONE 7:e52535. 2012
    ..1) (nominal combined p = 2.51×10(-6); Bonferroni adjusted p = 0.03). Our study represents the first comprehensive search for GxG in CRC, and our results may provide new insight into the genetic etiology of CRC...
  2. ncbi Probabilistic peak calling and controlling false discovery rate estimations in transcription factor binding site mapping from ChIP-seq
    Shuo Jiao
    Fred Hutchinson Cancer Institute, Seattle, WA, USA
    Methods Mol Biol 674:161-77. 2010
    ..s Quantitative Enrichment of Sequence Tags (QuEST) software tool. We demonstrate the prediction of the human growth-associated binding protein (GABPalpha) based on ChIP-seq observations...
  3. ncbi The use of imputed values in the meta-analysis of genome-wide association studies
    Shuo Jiao
    Cancer Prevention Program, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA
    Genet Epidemiol 35:597-605. 2011
    ..Our results show that the performance of the inverse variance weight is always indistinguishable from the optimal weight and similar to or better than the other two methods...
  4. ncbi Identification of Genetic Susceptibility Loci for Colorectal Tumors in a Genome-Wide Meta-analysis
    Ulrike Peters
    Public Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109 1024, USA
    Gastroenterology 144:799-807.e24. 2013
    ..Heritable factors contribute to the development of colorectal cancer. Identifying the genetic loci associated with colorectal tumor formation could elucidate the mechanisms of pathogenesis...
  5. ncbi Meta-analysis of new genome-wide association studies of colorectal cancer risk
    Ulrike Peters
    Cancer Prevention Program, Fred Hutchinson Cancer Research Center, Seattle, USA
    Hum Genet 131:217-34. 2012
    ..03; combined p value 1.9 × 10(-4)). Our study suggests a complex nature of the contribution of common genetic variants to risk for colorectal cancer...
  6. ncbi A pooled analysis of smoking and colorectal cancer: timing of exposure and interactions with environmental factors
    Jian Gong
    Public Health Sciences Division, Fred Hutchinson Cancer Research Center, University of Washington, Seattle, WA 98109, USA
    Cancer Epidemiol Biomarkers Prev 21:1974-85. 2012
    ..What is unclear, however, is the impact of quitting smoking on risk attenuation and whether other risk factors for CRC modify this association...
  7. ncbi Characterization of gene-environment interactions for colorectal cancer susceptibility loci
    Carolyn M Hutter
    Public Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA
    Cancer Res 72:2036-44. 2012
    ....
  8. ncbi A systematic mapping approach of 16q12.2/FTO and BMI in more than 20,000 African Americans narrows in on the underlying functional variation: results from the Population Architecture using Genomics and Epidemiology (PAGE) study
    Ulrike Peters
    Division of Public Health Sciences, Fred Hutchinson Cancer Research Center, Seattle, Washington, United States of America
    PLoS Genet 9:e1003171. 2013
    ..Importantly our study demonstrated that comprehensive fine-mapping in AA provides a powerful approach to narrow in on the functional candidate(s) underlying the initial GWAS findings in European populations...
  9. ncbi Powerful cocktail methods for detecting genome-wide gene-environment interaction
    Li Hsu
    Biostatistics and Biomathematics Program, Public Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109, USA
    Genet Epidemiol 36:183-94. 2012
    ..It also allows for an easy incorporation of new methods as they are developed. Our work provides a comprehensive and powerful tool for devising effective strategies for genome-wide detection of gene-environment interactions...