Research Topics
Genomes and Genes | Eileen JaffeSummaryAffiliation: Fox Chase Cancer Center Country: USA Publications
Research Grants
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Publications
Impact of quaternary structure dynamics on allosteric drug discoveryEileen K Jaffe
Institute for Cancer Research, Fox Chase Cancer Center, Philadelphia, PA 19111, USA
Curr Top Med Chem 13:55-63. 2013..Also highlighted is the quaternary structure equilibrium of transthyretin and successful drug discovery efforts focused on controlling its quaternary structure dynamics...
A new model for allosteric regulation of phenylalanine hydroxylase: implications for disease and therapeuticsEileen K Jaffe
Developmental Therapeutics, Institute for Cancer Research, Fox Chase Cancer Center, Temple Health, 333 Cottman Ave, Philadelphia, PA 19111, USA
Arch Biochem Biophys 530:73-82. 2013..Pharmacological chaperones that stabilize the ACT:ACT interface can potentially provide PKU patients with a novel small molecule therapeutic...
Allostery and the dynamic oligomerization of porphobilinogen synthaseEileen K Jaffe
Fox Chase Cancer Center, 333 Cottman Avenue, Philadelphia, PA 19111, USA
Arch Biochem Biophys 519:144-53. 2012..Some of these inhibitors are drugs in clinical use leading to the hypothesis that extrinsic allosteric inhibition of human PBGS could be a mechanism for drug side effects...
Rhodobacter capsulatus porphobilinogen synthase, a high activity metal ion independent hexamerDavid W Bollivar
Department of Biology, Illinois Wesleyan University, P, O, Box 2900, Bloomington, IL 61702 2900, USA
BMC Biochem 5:17. 2004..This paper reports new information on the metal ion independence and quaternary structure of PBGS from the photosynthetic bacterium Rhodobacter capsulatus...
Morpheeins--a new structural paradigm for allosteric regulationEileen K Jaffe
BioMolecular Structure and Function Group, Fox Chase Cancer Center, 333 Cottman Avenue, Philadelphia, PA 19111, USA
Trends Biochem Sci 30:490-7. 2005..It is proposed here that the behavior of some other allosteric enzymes reflect dynamic morpheein equilibrium systems and six candidate proteins are enumerated...
Crystal structure of Toxoplasma gondii porphobilinogen synthase: insights on octameric structure and porphobilinogen formationEileen K Jaffe
Institute for Cancer Research, Fox Chase Cancer Center, Philadelphia, Pennsylvania 19111, USA
J Biol Chem 286:15298-307. 2011..The TgPBGS structure suggests strategies for the development of parasite-selective PBGS inhibitors...
The morpheein model of allostery: evaluating proteins as potential morpheeinsEileen K Jaffe
Fox Chase Cancer Center, Philadelphia, PA, USA
Methods Mol Biol 796:217-31. 2012..The other is a two-dimensional native gel electrophoresis method to monitor ligand-induced changes in an equilibrium of alternate multimeric assemblies...
ALAD porphyria is a conformational diseaseEileen K Jaffe
Fox Chase Cancer Center, Philadelphia, PA 19111, USA
Am J Hum Genet 80:329-37. 2007..We propose that the disequilibrium of morpheein assemblies broadens the definition of conformational diseases beyond the prion disorders and that ALAD porphyria is the first example of a morpheein-based conformational disease...
Control of tetrapyrrole biosynthesis by alternate quaternary forms of porphobilinogen synthaseSabine Breinig
Fox Chase Cancer Center, 333 Cottman Avenue, Philadelphia, Pennsylvania 19111-2497, USA
Nat Struct Biol 10:757-63. 2003....
Plastid-associated porphobilinogen synthase from Toxoplasma gondii: kinetic and structural properties validate therapeutic potentialDhanasekaran Shanmugam
Department of Biology, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA
J Biol Chem 285:22122-31. 2010..The distinct phylogenetic, enzymatic, and structural features of apicomplexan PBGS offer scope for developing selective inhibitors of the parasite enzyme based on its quaternary structure characteristics...
Allosteric inhibition of human porphobilinogen synthaseSarah H Lawrence
Fox Chase Cancer Center, Philadelphia, Pennsylvania 19111, USA
J Biol Chem 284:35807-17. 2009..Data support the hypothesis that human PBGS hexamer stabilization may explain these side effects. The current work identifies allosteric ligands of human PBGS and, thus, identifies human PBGS as a medically relevant allosteric enzyme...
Species-specific inhibition of porphobilinogen synthase by 4-oxosebacic acidEileen K Jaffe
Institute for Cancer Research, Fox Chase Cancer Center, Philadelphia, Pennsylvania 19111, USA
J Biol Chem 277:19792-9. 2002..A comparison of these with other PBGS structures identifies highly conserved active site water molecules, which are isolated from bulk solvent and implicated as proton acceptors in the PBGS-catalyzed reaction...
The porphobilinogen synthase catalyzed reaction mechanismEileen K Jaffe
Fox Chase Cancer Center, 333 Cottman Avenue, Philadelphia, PA 19111, USA
Bioorg Chem 32:316-25. 2004..The reaction appears to stall at a covalently bound almost-product intermediate that is poised for breakdown to product upon binding of a substrate molecule to an adjacent active site and a subsequent conformational change...
Investigations on the metal switch region of human porphobilinogen synthaseEileen K Jaffe
Institute for Cancer Research, Fox Chase Cancer Center, 7701 Burholme Avenue, Philadelphia, PA 19111, USA
J Biol Inorg Chem 8:176-84. 2003..The R221K mutation was inserted into wild type and chimeric human PBGS and found to further reduce the activity of both, illustrating the subtle nature of the role of this residue...
An unusual phylogenetic variation in the metal ion binding sites of porphobilinogen synthaseEileen K Jaffe
Institute for Cancer Research, Fox Chase Cancer Center, 7701 Burholme Avenue, Philadelphia, PA 19111, USA
Chem Biol 10:25-34. 2003..The phylogenetic distribution of PBGS metal ion utilization suggests that the primordial PBGS required zinc and supports a hypothesis that the loss of the zinc site was concurrent with the advent of oxygenic photosynthesis...
Abrogation of fibroblast activation protein enzymatic activity attenuates tumor growthJonathan D Cheng
Department of Medical Oncology, Fox Chase Cancer Center, 333 Cottman Avenue, Philadelphia, PA 19111 2497, USA
Mol Cancer Ther 4:351-60. 2005....
Single amino acid mutations alter the distribution of human porphobilinogen synthase quaternary structure isoforms (morpheeins)Lei Tang
Fox Chase Cancer Center, Philadelphia, Pennsylvania 19111, USA
J Biol Chem 281:6682-90. 2006..The metastable nature of the R240A hexamer supports the hypothesis that octameric and hexameric morpheeins of PBGS are very close in energy. W19A assembles into a mixture of dimers, which appear to be stable...
Kinetics and thermodynamics of the interchange of the morpheein forms of human porphobilinogen synthaseTrevor Selwood
Fox Chase Cancer Center, 333 Cottman Avenue, Philadelphia, Pennsylvania 19111, USA
Biochemistry 47:3245-57. 2008....
Substrate-induced interconversion of protein quaternary structure isoformsLei Tang
Fox Chase Cancer Center, Philadelphia, Pennsylvania 19111, USA
J Biol Chem 280:15786-93. 2005..This observation illustrates that the assembly and disassembly of oligomeric proteins can be facilitated by the protein motions that accompany enzymatic catalysis...
A structural basis for half-of-the-sites metal binding revealed in Drosophila melanogaster porphobilinogen synthaseLenka Kundrat
Institute for Cancer Research, Fox Chase Cancer Center, Philadelphia, Pennsylvania 19111 2497, USA
J Biol Chem 278:31325-30. 2003..5/subunit. This result reveals a structural basis for half-of-the-sites metal binding that is consistent with a reciprocating motion model for function of oligomeric PBGS...
Shape shifting leads to small-molecule allosteric drug discoverySarah H Lawrence
Fox Chase Cancer Center, Philadelphia, PA 19111, USA
Chem Biol 15:586-96. 2008..We propose that this strategy for inhibitor discovery can be applied to other proteins that use the morpheein model for allosteric regulation...
delta-Aminolevulinate dehydratase (ALAD) porphyria: the first case in North America with two novel ALAD mutationsReiko Akagi
Department of Nutritional Science, Okayama Prefectural University, Soja, Japan
Mol Genet Metab 87:329-36. 2006..This case represents the molecular analysis of the ALAD gene defects in the first case of ADP identified in North America, who is a compound heterozygote for two novel ALAD gene defects...
Research Grants
- Hexameric PBGS as a Bioterrorism DefenseEileen Jaffe; Fiscal Year: 2006..Success of the proposed studies will establish a much needed new target for species selective antibiotic development that can be applied to bio-defense against NIAID priority pathogens. ..
- Human PBGS Quaternary Structure Dynamics, Drugs, and Half-of-the-sites ReactivityEileen K Jaffe; Fiscal Year: 2010..Inactivation of human PBGS is involved in the human conditions of ALAD porphyria and lead poisoning, the latter of which remains a pervasive public health problem in the United States and around the world. ..
- PORPHOBILINOGEN SYNTHASE FAMILYEileen Jaffe; Fiscal Year: 2002....
- PORPHOBILINOGEN SYNTHASE, PROBES OF THE ACTIVE SITEEileen Jaffe; Fiscal Year: 1993..Complementary to our chemical modification studies, we will elucidate the amino acids present at the PBGS active site by purifying and sequencing the chemically modified peptides...
- The Porphobilinogen Synthase FamilyEileen K Jaffe; Fiscal Year: 2010..In support of these aims are collaborations to probe the structure and function of PBGS using X-ray crystallography, Raman spectroscopy, and analytical ultracentrifugation. ..
