Research Topics
Genomes and Genes | E K JaffeSummaryAffiliation: Fox Chase Cancer Center Country: USA Publications
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Publications
The molecular mechanism of lead inhibition of human porphobilinogen synthaseE K Jaffe
Institute for Cancer Research, Fox Chase Cancer Center, Philadelphia, Pennsylvania 19111, USA
J Biol Chem 276:1531-7. 2001..The data support a novel model where a high affinity lead site is a hybrid of the ZnA and ZnB sites. We propose that the lone electron pair of Pb(II) precludes Pb(II) to function in PBGS catalysis...
The porphobilinogen synthase catalyzed reaction mechanismEileen K Jaffe
Fox Chase Cancer Center, 333 Cottman Avenue, Philadelphia, PA 19111, USA
Bioorg Chem 32:316-25. 2004..The reaction appears to stall at a covalently bound almost-product intermediate that is poised for breakdown to product upon binding of a substrate molecule to an adjacent active site and a subsequent conformational change...
An unusual phylogenetic variation in the metal ion binding sites of porphobilinogen synthaseEileen K Jaffe
Institute for Cancer Research, Fox Chase Cancer Center, 7701 Burholme Avenue, Philadelphia, PA 19111, USA
Chem Biol 10:25-34. 2003..The phylogenetic distribution of PBGS metal ion utilization suggests that the primordial PBGS required zinc and supports a hypothesis that the loss of the zinc site was concurrent with the advent of oxygenic photosynthesis...
Investigations on the metal switch region of human porphobilinogen synthaseEileen K Jaffe
Institute for Cancer Research, Fox Chase Cancer Center, 7701 Burholme Avenue, Philadelphia, PA 19111, USA
J Biol Inorg Chem 8:176-84. 2003..The R221K mutation was inserted into wild type and chimeric human PBGS and found to further reduce the activity of both, illustrating the subtle nature of the role of this residue...
Species-specific inhibition of porphobilinogen synthase by 4-oxosebacic acidEileen K Jaffe
Institute for Cancer Research, Fox Chase Cancer Center, Philadelphia, Pennsylvania 19111, USA
J Biol Chem 277:19792-9. 2002..A comparison of these with other PBGS structures identifies highly conserved active site water molecules, which are isolated from bulk solvent and implicated as proton acceptors in the PBGS-catalyzed reaction...
Mechanistic basis for suicide inactivation of porphobilinogen synthase by 4,7-dioxosebacic acid, an inhibitor that shows dramatic species selectivityJ Kervinen
Institute for Cancer Research, Fox Chase Cancer Center, 7701 Burholme Avenue, Philadelphia, Pennsylvania 19111, USA
Biochemistry 40:8227-36. 2001..coli numbering). This is the first structure to show inhibitor binding at the second of two substrate-binding sites...
Mechanistic implications of mutations to the active site lysine of porphobilinogen synthaseL W Mitchell
Institute for Cancer Research, Fox Chase Cancer Center, Philadelphia, Pennsylvania 19111, USA
J Biol Chem 276:1538-44. 2001..Thus, formation of the lysine to ALA Schiff base is not required to initiate the asymmetry that results in half-site reactivity...
Characterization of the role of the stimulatory magnesium of Escherichia coli porphobilinogen synthaseE K Jaffe
Institute for Cancer Research, Fox Chase Cancer Center, Philadelphia, Pennsylvania 19111
Biochemistry 34:244-51. 1995..The addition of unlabeled or 1-13C-labeled ALA does not significantly affect the Mn(II) EPR spectra.(ABSTRACT TRUNCATED AT 250 WORDS)..
An artificial gene for human porphobilinogen synthase allows comparison of an allelic variation implicated in susceptibility to lead poisoningE K Jaffe
Institute for Cancer Research, Fox Chase Cancer Center, Philadelphia, Pennsylvania 19111, USA
J Biol Chem 275:2619-26. 2000..However, there was no differential displacement of Zn(II) by Pb(II) between K59 and N59, and simple Pb(II) inhibition studies revealed no allelic difference...
Control of tetrapyrrole biosynthesis by alternate quaternary forms of porphobilinogen synthaseSabine Breinig
Fox Chase Cancer Center, 333 Cottman Avenue, Philadelphia, Pennsylvania 19111-2497, USA
Nat Struct Biol 10:757-63. 2003....
13C NMR studies of the enzyme-product complex of Bacillus subtilis chorismate mutaseJ S Rajagopalan
Institute for Cancer Research, Fox Chase Cancer Center, Philadelphia, Pennsylvania 19111
Biochemistry 32:3965-72. 1993..abstract truncated at 250 words)..
Porphobilinogen synthase from Escherichia coli is a Zn(II) metalloenzyme stimulated by Mg(II)L W Mitchell
Institute for Cancer Research, Fox Chase Cancer Center, Philadelphia, Pennsylvania 19111
Arch Biochem Biophys 300:169-77. 1993..Li, and M. P. Timko (1991) J. Biol. Chem. 266, 17060-17066]. This work lays the foundation for identification of functional amino acids based on the sequence similarities between PBGS from bacterial, plant, and mammalian sources...
Allosteric inhibition of human porphobilinogen synthaseSarah H Lawrence
Fox Chase Cancer Center, Philadelphia, Pennsylvania 19111, USA
J Biol Chem 284:35807-17. 2009..Data support the hypothesis that human PBGS hexamer stabilization may explain these side effects. The current work identifies allosteric ligands of human PBGS and, thus, identifies human PBGS as a medically relevant allosteric enzyme...
ALAD porphyria is a conformational diseaseEileen K Jaffe
Fox Chase Cancer Center, Philadelphia, PA 19111, USA
Am J Hum Genet 80:329-37. 2007..We propose that the disequilibrium of morpheein assemblies broadens the definition of conformational diseases beyond the prion disorders and that ALAD porphyria is the first example of a morpheein-based conformational disease...
Morpheeins--a new structural paradigm for allosteric regulationEileen K Jaffe
BioMolecular Structure and Function Group, Fox Chase Cancer Center, 333 Cottman Avenue, Philadelphia, PA 19111, USA
Trends Biochem Sci 30:490-7. 2005..It is proposed here that the behavior of some other allosteric enzymes reflect dynamic morpheein equilibrium systems and six candidate proteins are enumerated...
Abrogation of fibroblast activation protein enzymatic activity attenuates tumor growthJonathan D Cheng
Department of Medical Oncology, Fox Chase Cancer Center, 333 Cottman Avenue, Philadelphia, PA 19111 2497, USA
Mol Cancer Ther 4:351-60. 2005....
Plastid-associated porphobilinogen synthase from Toxoplasma gondii: kinetic and structural properties validate therapeutic potentialDhanasekaran Shanmugam
Department of Biology, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA
J Biol Chem 285:22122-31. 2010..The distinct phylogenetic, enzymatic, and structural features of apicomplexan PBGS offer scope for developing selective inhibitors of the parasite enzyme based on its quaternary structure characteristics...
Single amino acid mutations alter the distribution of human porphobilinogen synthase quaternary structure isoforms (morpheeins)Lei Tang
Fox Chase Cancer Center, Philadelphia, Pennsylvania 19111, USA
J Biol Chem 281:6682-90. 2006..The metastable nature of the R240A hexamer supports the hypothesis that octameric and hexameric morpheeins of PBGS are very close in energy. W19A assembles into a mixture of dimers, which appear to be stable...
Kinetics and thermodynamics of the interchange of the morpheein forms of human porphobilinogen synthaseTrevor Selwood
Fox Chase Cancer Center, 333 Cottman Avenue, Philadelphia, Pennsylvania 19111, USA
Biochemistry 47:3245-57. 2008....
Substrate-induced interconversion of protein quaternary structure isoformsLei Tang
Fox Chase Cancer Center, Philadelphia, Pennsylvania 19111, USA
J Biol Chem 280:15786-93. 2005..This observation illustrates that the assembly and disassembly of oligomeric proteins can be facilitated by the protein motions that accompany enzymatic catalysis...
A structural basis for half-of-the-sites metal binding revealed in Drosophila melanogaster porphobilinogen synthaseLenka Kundrat
Institute for Cancer Research, Fox Chase Cancer Center, Philadelphia, Pennsylvania 19111 2497, USA
J Biol Chem 278:31325-30. 2003..5/subunit. This result reveals a structural basis for half-of-the-sites metal binding that is consistent with a reciprocating motion model for function of oligomeric PBGS...
Shape shifting leads to small-molecule allosteric drug discoverySarah H Lawrence
Fox Chase Cancer Center, Philadelphia, PA 19111, USA
Chem Biol 15:586-96. 2008..We propose that this strategy for inhibitor discovery can be applied to other proteins that use the morpheein model for allosteric regulation...
delta-Aminolevulinate dehydratase (ALAD) porphyria: the first case in North America with two novel ALAD mutationsReiko Akagi
Department of Nutritional Science, Okayama Prefectural University, Soja, Japan
Mol Genet Metab 87:329-36. 2006..This case represents the molecular analysis of the ALAD gene defects in the first case of ADP identified in North America, who is a compound heterozygote for two novel ALAD gene defects...
Rhodobacter capsulatus porphobilinogen synthase, a high activity metal ion independent hexamerDavid W Bollivar
Department of Biology, Illinois Wesleyan University, P, O, Box 2900, Bloomington, IL 61702 2900, USA
BMC Biochem 5:17. 2004..This paper reports new information on the metal ion independence and quaternary structure of PBGS from the photosynthetic bacterium Rhodobacter capsulatus...
