Marc W Allard

Summary

Affiliation: Food and Drug Administration
Country: USA

Publications

  1. pmc Using metagenomic analyses to estimate the consequences of enrichment bias for pathogen detection
    James B Pettengill
    FDA Center for Food Safety and Applied Nutrition, Division of Microbiology, Molecular Methods and Subtyping, College Park, MD 20740, USA
    BMC Res Notes 5:378. 2012
  2. pmc Baseline survey of the anatomical microbial ecology of an important food plant: Solanum lycopersicum (tomato)
    Andrea R Ottesen
    FDA Center for Food Safety and Applied Nutrition, Division of Microbiology, Molecular Methods and Subtyping, 5100 Paint Branch Parkway, College Park, MD 20740, USA
    BMC Microbiol 13:114. 2013
  3. pmc Characterization of microflora in Latin-style cheeses by next-generation sequencing technology
    Tina S Lusk
    Oak Ridge Institute for Science and Education, Oak Ridge, TN 38730, USA
    BMC Microbiol 12:254. 2012
  4. pmc On the evolutionary history, population genetics and diversity among isolates of Salmonella Enteritidis PFGE pattern JEGX01.0004
    Marc W Allard
    Office of Regulatory Science, Center for Food Safety and Applied Nutrition, Food and Drug Administration, College Park, Maryland, United States of America
    PLoS ONE 8:e55254. 2013
  5. pmc High resolution clustering of Salmonella enterica serovar Montevideo strains using a next-generation sequencing approach
    Marc W Allard
    Office of Regulatory Science, Center for Food Safety and Applied Nutrition, U, S, Food and Drug Administration, 5100 Paint Branch Parkway, College Park, MD 20740, USA
    BMC Genomics 13:32. 2012
  6. ncbi request reprint Identification of a salmonellosis outbreak by means of molecular sequencing
    E Kurt Lienau
    Food and Drug Administration, College Park, MD
    N Engl J Med 364:981-2. 2011
  7. pmc Draft genome sequences of 21 Salmonella enterica serovar enteritidis strains
    Ruth E Timme
    Communications, and Emergency Response, Center for Food Safety and Applied Nutrition, US Food and Drug Administration, College Park, Maryland, USA
    J Bacteriol 194:5994-5. 2012
  8. pmc Fully Assembled Genome Sequence for Salmonella enterica subsp. enterica Serovar Javiana CFSAN001992
    Marc W Allard
    Office of Regulatory Science, Center for Food Safety and Applied Nutrition, U S Food and Drug Administration, College Park, Maryland, USA
    Genome Announc 1:e0008113. 2013
  9. pmc Genome sequences of five Salmonella enterica serovar Heidelberg isolates associated with a 2011 multistate outbreak in the United States
    Maria Hoffmann
    Division of Animal and Food Microbiology, Office of Research, Center for Veterinary Medicine, U S Food and Drug Administration, Laurel, Maryland, USA
    J Bacteriol 194:3274-5. 2012
  10. doi request reprint Vibrio caribbeanicus sp. nov., isolated from the marine sponge Scleritoderma cyanea
    Maria Hoffmann
    US Food and Drug Administration, Paint Branch Parkway, College Park, MD 20740, USA
    Int J Syst Evol Microbiol 62:1736-43. 2012

Collaborators

Detail Information

Publications11

  1. pmc Using metagenomic analyses to estimate the consequences of enrichment bias for pathogen detection
    James B Pettengill
    FDA Center for Food Safety and Applied Nutrition, Division of Microbiology, Molecular Methods and Subtyping, College Park, MD 20740, USA
    BMC Res Notes 5:378. 2012
    ..With the advent of next-generation sequencing and metagenomic approaches, the possibility now exists to quantify enrichment bias at an unprecedented taxonomic breadth...
  2. pmc Baseline survey of the anatomical microbial ecology of an important food plant: Solanum lycopersicum (tomato)
    Andrea R Ottesen
    FDA Center for Food Safety and Applied Nutrition, Division of Microbiology, Molecular Methods and Subtyping, 5100 Paint Branch Parkway, College Park, MD 20740, USA
    BMC Microbiol 13:114. 2013
    ....
  3. pmc Characterization of microflora in Latin-style cheeses by next-generation sequencing technology
    Tina S Lusk
    Oak Ridge Institute for Science and Education, Oak Ridge, TN 38730, USA
    BMC Microbiol 12:254. 2012
    ..We used 16S rRNA gene sequencing to provide a preliminary survey of bacterial species associated with three brands of Latin-style cheeses after 24-hour broth enrichment...
  4. pmc On the evolutionary history, population genetics and diversity among isolates of Salmonella Enteritidis PFGE pattern JEGX01.0004
    Marc W Allard
    Office of Regulatory Science, Center for Food Safety and Applied Nutrition, Food and Drug Administration, College Park, Maryland, United States of America
    PLoS ONE 8:e55254. 2013
    ..Enteritidis PFGE pattern JEGX01.0004...
  5. pmc High resolution clustering of Salmonella enterica serovar Montevideo strains using a next-generation sequencing approach
    Marc W Allard
    Office of Regulatory Science, Center for Food Safety and Applied Nutrition, U, S, Food and Drug Administration, 5100 Paint Branch Parkway, College Park, MD 20740, USA
    BMC Genomics 13:32. 2012
    ..All new draft genomes were compared to 34 S. Montevideo isolates previously published during an NGS-based molecular epidemiological case study...
  6. ncbi request reprint Identification of a salmonellosis outbreak by means of molecular sequencing
    E Kurt Lienau
    Food and Drug Administration, College Park, MD
    N Engl J Med 364:981-2. 2011
    ..The complexity of the modern food supply makes identifying foodborne outbreaks difficult. In this report, FDA investigators identify a 44-state outbreak of Salmonella enterica serotype Montevideo, using molecular sequencing...
  7. pmc Draft genome sequences of 21 Salmonella enterica serovar enteritidis strains
    Ruth E Timme
    Communications, and Emergency Response, Center for Food Safety and Applied Nutrition, US Food and Drug Administration, College Park, Maryland, USA
    J Bacteriol 194:5994-5. 2012
    ..The whole-genome sequence data for these 21 human pathogen strains are being released in conjunction with the newly formed 100K Genome Project...
  8. pmc Fully Assembled Genome Sequence for Salmonella enterica subsp. enterica Serovar Javiana CFSAN001992
    Marc W Allard
    Office of Regulatory Science, Center for Food Safety and Applied Nutrition, U S Food and Drug Administration, College Park, Maryland, USA
    Genome Announc 1:e0008113. 2013
    ..Complete (finished) genome assemblies will support pilot studies testing the utility of next-generation sequencing (NGS) technologies in public health laboratories...
  9. pmc Genome sequences of five Salmonella enterica serovar Heidelberg isolates associated with a 2011 multistate outbreak in the United States
    Maria Hoffmann
    Division of Animal and Food Microbiology, Office of Research, Center for Veterinary Medicine, U S Food and Drug Administration, Laurel, Maryland, USA
    J Bacteriol 194:3274-5. 2012
    ..Whole-genome sequence analysis of these isolates provides a tool for studying the short-term evolution of these epidemic clones...
  10. doi request reprint Vibrio caribbeanicus sp. nov., isolated from the marine sponge Scleritoderma cyanea
    Maria Hoffmann
    US Food and Drug Administration, Paint Branch Parkway, College Park, MD 20740, USA
    Int J Syst Evol Microbiol 62:1736-43. 2012
    ..Collectively, these findings confirm that strain N384(T) represents a novel Vibrio species, for which the name Vibrio caribbeanicus sp. nov. is proposed, with the type strain N384(T) ( = ATCC BAA-2122(T) = DSM 23640(T))...
  11. pmc Confirming the phylogeny of mammals by use of large comparative sequence data sets
    Arjun B Prasad
    Genome Technology Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD, USA
    Mol Biol Evol 25:1795-808. 2008
    ..g., in the case of Laurasiatheria), and demonstrate the valuable role that very large comparative sequence data sets can play in refining our understanding of the evolutionary relationships of vertebrates...