Research Topics
Species | Randy JirtleSummaryAffiliation: Duke University Medical Center Country: USA Publications
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Publications
Cancer susceptibility: epigenetic manifestation of environmental exposuresJennifer R Weidman
Department of Radiation Oncology, Duke University, Durham, NC 27710, USA
Cancer J 13:9-16. 2007..These major deficits in knowledge markedly impair our ability to understand fully the etiology of cancer and the importance of the epigenome in diagnosing and preventing this devastating disease...
Folic acid supplementation before and during pregnancy in the Newborn Epigenetics STudy (NEST)Cathrine Hoyo
Department of Community and Family Medicine and Program of Cancer Detection, Prevention and Control, Duke University, PO Box 104006, Durham, NC 27710, USA
BMC Public Health 11:46. 2011..The primary objective is to estimate the proportion of women taking folic acid (FA) doses exceeding the TUL before and during pregnancy, and to identify correlates of high FA use...
M6P/IGF2R loss of heterozygosity in head and neck cancer associated with poor patient prognosisTimothy A Jamieson
Department of Radiation Oncology, Duke University Medical Center, Durham, NC, USA
BMC Cancer 3:4. 2003..The purpose of this investigation was to determine if the M6P/IGF2R tumor suppressor gene is mutated in human head and neck cancer, and if allelic loss is associated with poor patient prognosis...
Environmental epigenomics and disease susceptibilityRandy L Jirtle
Department of Radiation Oncology, Duke University Medical Center, Durham, North Carolina 27710, USA
Nat Rev Genet 8:253-62. 2007..Methods are now becoming available to investigate the relevance of these phenomena to human disease...
Risk of long-term complications after TFG-beta1-guided very-high-dose thoracic radiotherapyMitchell S Anscher
Department of Radiation Oncology, Duke University Medical Center, Durham, NC 27710, USA
Int J Radiat Oncol Biol Phys 56:988-95. 2003..To report the incidence of late complications in long-term survivors of very-high-dose thoracic radiotherapy (RT) treated on a prospective clinical trial...
IGF2R polymorphisms and risk of esophageal and gastric adenocarcinomasCathrine Hoyo
Department of Community and Family Medicine, Duke University, Durham, NC 27710, USA
Int J Cancer 125:2673-8. 2009..5002G > A genotype and EGA was not evident. These findings suggest that nonsynonymous polymorphisms in M6P/IGF2R may contribute to the risks of EGA and noncardia adenocarcinomas. Larger studies are required to confirm these findings...
Transposable elements: targets for early nutritional effects on epigenetic gene regulationRobert A Waterland
Department of Radiation Oncology, Duke University Medical Center, Durham, NC 27710, USA
Mol Cell Biol 23:5293-300. 2003..These findings suggest that dietary supplementation, long presumed to be purely beneficial, may have unintended deleterious influences on the establishment of epigenetic gene regulation in humans...
Early nutrition, epigenetic changes at transposons and imprinted genes, and enhanced susceptibility to adult chronic diseasesRobert A Waterland
Department of Radiation Oncology, Duke University Medical Center, Durham, North Carolina 27710, USA
Nutrition 20:63-8. 2004
Metastable epialleles, imprinting, and the fetal origins of adult diseasesDana C Dolinoy
Department of Radiation Oncology, University Program in Genetics and Genomics, Duke University Medical Center, Durham, NC 27710, USA
Pediatr Res 61:30R-37R. 2007....
Imprinting of opossum Igf2r in the absence of differential methylation and airJennifer R Weidman
Department of Radiation Oncology, Duke University Medical Center, Durham, North Carolina 27710, USA
Epigenetics 1:49-54. 2006..Thus, the regulatory mechanisms of Igf2r imprinting did not evolve convergently within the Therian subclass of mammals...
Imprinting evolution and the price of silenceSusan K Murphy
Department of Radiation Oncology, Duke University Medical Center, Durham, NC 27710, USA
Bioessays 25:577-88. 2003..Such comparative studies will also further our understanding of the molecular evolution and phylogenetic distribution of imprinted genes...
Tissue-specific inactivation of murine M6P/IGF2RAndrew A Wylie
Department of Radiation Oncology, Duke University Medical Center, Durham, North Carolina 27710, USA
Am J Pathol 162:321-8. 2003....
Epigenetic gene regulation: linking early developmental environment to adult diseaseDana C Dolinoy
Department of Radiation Oncology, Duke University Medical Center, Box 3433, Durham, NC 27710, United States
Reprod Toxicol 23:297-307. 2007....
Depression in pregnancy, infant birth weight and DNA methylation of imprint regulatory elementsYing Liu
School of Medicine, Duke University, Durham, NC, USA
Epigenetics 7:735-46. 2012..9% higher methylation at the PLAGL1 DMR compared with normal birth weight infants. Our findings confirm that severe maternal depressed mood in pregnancy is associated with LBW, and that MEG3 and IGF2 plasticity may play important roles...
Environmental epigenomics in human health and diseaseDana C Dolinoy
Department of Radiation Oncology, Duke University Medical Center, Durham, North Carolina 27710, USA
Environ Mol Mutagen 49:4-8. 2008....
Maternal nutrient supplementation counteracts bisphenol A-induced DNA hypomethylation in early developmentDana C Dolinoy
Department of Radiation Oncology and University Program in Genetics and Genomics, Duke University, Durham, NC 27710, USA
Proc Natl Acad Sci U S A 104:13056-61. 2007..Thus, we present compelling evidence that early developmental exposure to BPA can change offspring phenotype by stably altering the epigenome, an effect that can be counteracted by maternal dietary supplements...
M6P/IGF2R tumor suppressor gene mutated in hepatocellular carcinomas in JapanYoshihiko Oka
Department of Radiation Oncology, Duke University Medical Center, Durham, NC 27710, USA
Hepatology 35:1153-63. 2002..Loss of heterozygosity in dysplastic liver nodules provides additional evidence that M6P/IGF2R haploid insufficiency is an early event in human hepatocarcinogenesis...
Phylogenetic footprint analysis of IGF2 in extant mammalsJennifer R Weidman
Department of Radiation Oncology, Duke University, Durham, North Carolina 27710, USA
Genome Res 14:1726-32. 2004....
Computational and experimental identification of novel human imprinted genesPhilippe P Luedi
Center for Bioinformatics and Computational Biology, Duke University, Durham, North Carolina 27708, USA
Genome Res 17:1723-30. 2007..Our findings demonstrate that DNA sequence characteristics, including recombination hot spots, are sufficient to accurately predict the imprinting status of individual genes in the human genome...
Imprinting evolution and human healthRadhika Das
Department of Radiation Oncology, Duke University Medical Center, Durham, NC 27710, USA
Mamm Genome 20:563-72. 2009..This review discusses the evolution of imprinting in Therian mammals, and the importance of imprinted genes in human health and disease...
Comparative phylogenetic analysis of blcap/nnat reveals eutherian-specific imprinted geneHeather K Evans
Department of Radiation Oncology, Duke University, Durham, North Carolina, USA
Mol Biol Evol 22:1740-8. 2005..This finding also suggests that the complexity of imprinting regulation observed at other loci may, in part, be directly related to the amount of time they have been imprinted...
Maternal genistein alters coat color and protects Avy mouse offspring from obesity by modifying the fetal epigenomeDana C Dolinoy
Department of Radiation Oncology, Duke University Medical Center, Durham, NC 27710, USA
Environ Health Perspect 114:567-72. 2006..Thus, we provide the first evidence that in utero dietary genistein affects gene expression and alters susceptibility to obesity in adulthood by permanently altering the epigenome...
Comparative phylogenetic analysis reveals multiple non-imprinted isoforms of opossum Dlk1Jennifer R Weidman
Department of Radiation Oncology, Duke University Medical Center, Durham, North Carolina 27710, USA
Mamm Genome 17:157-67. 2006..These findings clearly demonstrate that imprinted genes did not all evolve before the divergence of marsupials and eutherians...
Abnormal postnatal maintenance of elevated DLK1 transcript levels in callipyge sheepSusan K Murphy
Department of Radiation Oncology, Duke University, Box 3433, Durham, North Carolina 27710, USA
Mamm Genome 16:171-83. 2005..They suggest that the effect of the callipyge mutation is to interfere with the normal postnatal downregulation of DLK1 expression...
Callipyge mutation affects gene expression in cis: a potential role for chromatin structureSusan K Murphy
Department of Radiation Oncology, Duke University, Durham, North Carolina 27710, USA
Genome Res 16:340-6. 2006..We propose a model incorporating these results that can also account for the enigmatic normal phenotype of homozygous mutant sheep...
Genome-wide prediction of imprinted murine genesPhilippe P Luedi
Center for Bioinformatics and Computational Biology, Duke University, Durham, North Carolina 27708, USA
Genome Res 15:875-84. 2005..We observe that the number, type, and relative orientation of repeated elements flanking a gene are particularly important in predicting whether a gene is imprinted...
Clinical significance of loss of heterozygosity for M6P/IGF2R in patients with primary hepatocellular carcinomaHong Seok Jang
Department of Radiation Oncology, The Catholic University of Korea, School of Medicine, Seoul, Korea
World J Gastroenterol 14:1394-8. 2008..To investigate the relationship between loss of heterozygosity (LOH) for mannose 6-phosphate/insulin-like growth factor 2 receptor (M6P/IGF2R) and the outcomes for primary HCC patients treated with partial hepatectomy...
An imprinted PEG1/MEST antisense expressed predominantly in human testis and in mature spermatozoaTao Li
Medical Service, Veterans Affairs Palo Alto Health Care System and the Department of Medicine, Stanford University School of Medicine, Palo Alto, California 94304, USA
J Biol Chem 277:13518-27. 2002..Of interest, PEG1-AS was expressed predominantly in testis and in mature motile spermatozoa, indicating a possible role for this transcript in human sperm physiology and fertilization...
Post-weaning diet affects genomic imprinting at the insulin-like growth factor 2 (Igf2) locusRobert A Waterland
Departments of Pediatrics and Molecular and Human Genetics, Baylor College of Medicine, USDA Children s Nutrition Research Center, Houston, TX 77030 2600, USA
Hum Mol Genet 15:705-16. 2006..These results indicate that post-weaning diet can permanently affect expression of Igf2, suggesting that childhood diet could contribute to IGF2 LOI in humans...
Mannose 6-phosphate receptors in an ancient vertebrate, zebrafishCatherine M Nolan
School of Biological and Environmental Science, University College Dublin, Belfield, Dublin 4, Ireland
Dev Genes Evol 216:144-51. 2006..Our study establishes zebrafish as a novel, genetically tractable model for in vivo studies of MPR function and lysosome biogenesis...
Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequencesTarjei S Mikkelsen
Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, Massachusetts 02142, USA
Nature 447:167-77. 2007..A substantial proportion of these eutherian-specific CNEs arose from sequence inserted by transposable elements, pointing to transposons as a major creative force in the evolution of mammalian gene regulation...
Randy L. Jirtle, PhD: epigenetics a window on gene dysregulation, disease. Interview by Bridget M. KuehnRandy L Jirtle
JAMA 299:1249-50. 2008
Moving AHEAD with an international human epigenome projectPeter A Jones
Nature 454:711-5. 2008
IGF2 loss of imprinting: a potential heritable risk factor for colorectal cancerRandy L Jirtle
Gastroenterology 126:1190-3. 2004
Identification of the single base change causing the callipyge muscle hypertrophy phenotype, the only known example of polar overdominance in mammalsBrad A Freking
U S Department of Agriculture, Agricultural Research Service, U S Meat Animal Research Center, Clay Center, Nebraska 68933 0166, USA
Genome Res 12:1496-506. 2002..Initial functional analysis indicates sequence encompassing the mutation is part of a novel transcript expressed in sheep fetal muscle we have named CLPG1...
Epigenetic silencing of genes in human colon cancerRodger A Liddle
Gastroenterology 131:960-2. 2006
Research Grants
- Identification and Characterization of Epigenetically Labile GenesRandy Jirtle; Fiscal Year: 2009..They will also be helpful in determining under what circumstances the mouse is an appropriate toxicological model for assessing human risk from agents that elicit their biological effect primarily by altering the epigenome. ..
- TUMOR SUPPRESSOR FUNCTION OF THE M6P/IGF2 RECEPTORRandy Jirtle; Fiscal Year: 2001..Finally, for Aim 4 studies, a transgenic mouse will be constructed with inducible knock-out of the M6P/IGF2r gene for evaluation in the carcinogenesis models. ..
- IMPRINTING EVOLUTION AND CANCER SUSCEPTIBILITYRandy Jirtle; Fiscal Year: 2004..The proposed studies will determine if mammalian cancer susceptibility is a detrimental result of genomic imprinting evolution. ..
- Identification and Characterization of Epigenetically Labile GenesRandy Jirtle; Fiscal Year: 2007..They will also be helpful in determining under what circumstances the mouse is an appropriate toxicological model for assessing human risk from agents that elicit their biological effect primarily by altering the epigenome. ..
- Phylogenetic Comparisons of Imprinted DomainsRandy Jirtle; Fiscal Year: 2007..abstract_text> ..
- Dietary Supplements, Imprint Gene Expression and CancerRandy Jirtle; Fiscal Year: 2006....
- GROWTH FACTORS AND LIVER TUMOR PROMOTIONRandy Jirtle; Fiscal Year: 1999..The results of these studies should provide a better understanding of the role of the M6P/IGFII receptor and TGFbeta in liver tumor promotion, and enable us to assess substances for human carcinogenic risk with greater accuracy. ..
- SURVIVAL AND CARCINOGENESIS IN TRANSPLANTED HEPATOCYTESRandy Jirtle; Fiscal Year: 1980....
- GROWTH FACTORS AND LIVER TUMOR PROMOTIONRandy Jirtle; Fiscal Year: 1993..alpha1-adrenergic co-mitogenic activities). In summary, we will investigate at the cellular, biochemical, and molecular levels the mechanisms by which PB promotes hepatocellular tumor formation...
- SURVIVAL AND CARCINOGENESIS IN TRANSPLANTED HEPATOCYTESRandy Jirtle; Fiscal Year: 1991..In summary, we will utilize hepatocyte transplantation, primary culture and molecular biological techniques to investigate at the organismal, cellular and molecular level the mechanism(s) of hepatocellular tumor formation with PB...
