Research Topics
Genomes and Genes | Kevin J PetersonSummaryAffiliation: Dartmouth Medical School Country: USA Publications
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Detail Information
Publications
The phylogenetic distribution of metazoan microRNAs: insights into evolutionary complexity and constraintLorenzo F Sempere
Department of Biochemistry, Dartmouth Medical School, Hanover, NH 03755, USA
J Exp Zoolog B Mol Dev Evol 306:575-88. 2006....
Poriferan ANTP genes: primitively simple or secondarily reduced?Kevin J Peterson
Department of Biological Sciences, Dartmouth College, Hanover, NH 03755, USA
Evol Dev 9:405-8. 2007
The Ediacaran emergence of bilaterians: congruence between the genetic and the geological fossil recordsKevin J Peterson
Department of Biological Sciences, Dartmouth College, Hanover, NH 03755, USA
Philos Trans R Soc Lond B Biol Sci 363:1435-43. 2008....
MicroRNAs and metazoan macroevolution: insights into canalization, complexity, and the Cambrian explosionKevin J Peterson
Department of Biological Sciences, Dartmouth College, Hanover, NH 03755, USA
Bioessays 31:736-47. 2009..Hence, miRNAs might play an important role in shaping metazoan macroevolution, and might be part of the solution to the Cambrian conundrum...
Origin of the Eumetazoa: testing ecological predictions of molecular clocks against the Proterozoic fossil recordKevin J Peterson
Department of Biological Sciences, Dartmouth College, Hanover, NH 03755, USA
Proc Natl Acad Sci U S A 102:9547-52. 2005..Thus, the more readily preserved microfossil record provides positive evidence for the absence of pre-Ediacaran eumetazoans and strongly supports the veracity, and therefore more general application, of the ME molecular clock...
MicroRNAs and the advent of vertebrate morphological complexityAlysha M Heimberg
Department of Biological Sciences, Dartmouth College, Hanover, NH 03755, USA
Proc Natl Acad Sci U S A 105:2946-50. 2008..We hypothesize that lying behind the origin of vertebrate complexity is the dramatic expansion of the noncoding RNA inventory including miRNAs, rather than an increase in the protein-encoding inventory caused by GDEs...
microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrateAlysha M Heimberg
Department of Biological Sciences, Dartmouth College, Hanover, NH 03755, USA
Proc Natl Acad Sci U S A 107:19379-83. 2010....
Phylogenetic analysis of the formin homology 2 domainHenry N Higgs
Department of Biochemistry, Dartmouth Medical School, Hanover, NH 03755, USA
Mol Biol Cell 16:1-13. 2005..This analysis allows for a formin nomenclature system based on sequence relationships, as well as suggesting strategies for the determination of biochemical and cellular activities of these proteins...
Isolation of Hox and Parahox genes in the hemichordate Ptychodera flava and the evolution of deuterostome Hox genesKevin J Peterson
Department of Biological Sciences, Dartmouth College, Hanover, NH 03755, USA
Mol Phylogenet Evol 31:1208-15. 2004..flava are arranged in a single cluster. Of particular importance is the isolation of three posterior or Abd-B Hox genes; these genes are only shared with echinoderms, and thus support the monophyly of Ambulacraria...
Phylogenetic distribution of microRNAs supports the basal position of acoel flatworms and the polyphyly of PlatyhelminthesLorenzo F Sempere
Department of Biochemistry, Dartmouth Medical School, Hanover, NH 03755, USA
Evol Dev 9:409-15. 2007....
Molecular paleoecology: using gene regulatory analysis to address the origins of complex life cycles in the late PrecambrianEwan F Dunn
Department of Biological Sciences, Dartmouth College, Hanover, NH 03755, USA
Evol Dev 9:10-24. 2007....
Estimating metazoan divergence times with a molecular clockKevin J Peterson
Department of Biological Sciences, Dartmouth College, Hanover, NH 03755, USA
Proc Natl Acad Sci U S A 101:6536-41. 2004..These results are in accord with the known fossil record and support the view that the Cambrian explosion reflects, in part, the diversification of bilaterian phyla...
The identification of microRNAs in calcisponges: independent evolution of microRNAs in basal metazoansJeffrey M Robinson
Department of Biological Sciences, Dartmouth College, Hanover, New Hampshire 03755, USA
J Exp Zool B Mol Dev Evol 320:84-93. 2013..The role(s) miRNAs play though in sponge biology and evolution remains an open question...
Do miRNAs have a deep evolutionary history?James E Tarver
School of Earth Sciences, University of Bristol, Bristol, UK
Bioessays 34:857-66. 2012..Therefore, at present only five groups of eukaryotes are known to possess miRNAs, indicating that miRNAs have evolved independently within eukaryotes through exaptation of their shared inherited RNAi machinery...
A molecular palaeobiological hypothesis for the origin of aplacophoran molluscs and their derivation from chiton-like ancestorsJakob Vinther
Department of Geology and Geophysics, Yale University, PO Box 208109, New Haven, CT 06520 8109, USA
Proc Biol Sci 279:1259-68. 2012..The recovery of cephalopods as a sister group to aculiferans suggests that the plesiomorphic condition in molluscs might be a morphology similar to that found in monoplacophorans...
microRNA complements in deuterostomes: origin and evolution of microRNAsFlorent Campo-Paysaa
Institut de Génomique Fonctionnelle de Lyon UCBL, CNRS UMR5242, ENS, INRA 1288, Ecole Normale Superieure de Lyon, 46 allee d Italie, 69364 Lyon Cedex 07, France
Evol Dev 13:15-27. 2011....
Paleogenomics of echinodermsDavid J Bottjer
Department of Earth Sciences, University of Southern California, Los Angeles, CA 90089 0740, USA
Science 314:956-60. 2006..purpuratus genome and are likely to be the same genes that were involved with stereom formation in the earliest echinoderms some 520 million years ago...
Unusual gene order and organization of the sea urchin hox clusterR Andrew Cameron
Division of Biology and the Beckman Institute, California Institute of Technology, Pasadena, CA 91125, USA
J Exp Zool B Mol Dev Evol 306:45-58. 2006..Comparisons with a putative ancestral deuterostome Hox gene cluster suggest that the rearrangements leading to the sea urchin gene order were many and complex...
Testing putative hemichordate homologues of the chordate dorsal nervous system and endostyle: expression of NK2.1 (TTF-1) in the acorn worm Ptychodera flava (Hemichordata, Ptychoderidae)Carter M Takacs
Dartmouth Coll, Hanover, NH
Evol Dev 4:405-17. 2002..In addition, we conclude that P. flava most likely does not possess a true endostyle; rather during the evolution of the endostyle NK2.1 was recruited from its more general role in pharynx development...
Genetic organization and embryonic expression of the ParaHox genes in the sea urchin S. purpuratus: insights into the relationship between clustering and colinearityMaria I Arnone
Stazione Zoologica Anton Dohrn, Villa Comunale, 80121 Napoli, Italy
Dev Biol 300:63-73. 2006....
Spdeadringer, a sea urchin embryo gene required separately in skeletogenic and oral ectoderm gene regulatory networksGabriele Amore
Division of Biology, California Institute of Technology, Pasadena, CA 91125, USA
Dev Biol 261:55-81. 2003....
