Daniel Gardner

Summary

Affiliation: Cornell University
Country: USA

Publications

  1. pmc Common data model for neuroscience data and data model exchange
    D Gardner
    Weill Medical College of Cornell University, and New York University School of Medicine, New York, NY 10021, USA
    J Am Med Inform Assoc 8:17-33. 2001
  2. pmc Dynamic publication model for neurophysiology databases
    D Gardner
    Department of Physiology, Weill Medical College of Cornell University, 1300 York Avenue, New York, NY 10021 48 05, USA
    Philos Trans R Soc Lond B Biol Sci 356:1229-47. 2001
  3. ncbi request reprint Towards effective and rewarding data sharing
    Daniel Gardner
    Laboratory of Neuroinformatics, Department of Physiology and Biophysics, Weill Medical College of Cornell University, NewYork, NY 10021, USA
    Neuroinformatics 1:289-95. 2003
  4. ncbi request reprint Neurodatabase.org: networking the microelectrode
    Daniel Gardner
    Laboratory of Neuroinformatics, Department of Physiology, Weill Medical College of Cornell University, New York, New York 10021, USA
    Nat Neurosci 7:486-7. 2004
  5. ncbi request reprint A gateway to the future of neuroinformatics
    Daniel Gardner
    Laboratory of Neuroinformatics, Department of Physiology and Biophysics, Weill Medical College of Cornell University, NY, USA
    Neuroinformatics 2:271-4. 2004
  6. pmc The neuroscience information framework: a data and knowledge environment for neuroscience
    Daniel Gardner
    Laboratory of Neuroinformatics and Department of Physiology, Weill Medical College, Cornell University, 1300 York Avenue, New York, NY, 10065, USA
    Neuroinformatics 6:149-60. 2008
  7. pmc Terminology for neuroscience data discovery: multi-tree syntax and investigator-derived semantics
    Daniel Gardner
    Laboratory of Neuroinformatics and Department of Physiology, Weill Medical College of Cornell University, 1300 York Avenue, New York, NY, 10065, USA
    Neuroinformatics 6:161-74. 2008
  8. pmc Spike train analysis toolkit: enabling wider application of information-theoretic techniques to neurophysiology
    David H Goldberg
    Laboratory of Neuroinformatics D 404 and Department of Physiology, Weill Medical College of Cornell University, 1300 York Avenue, New York, NY 10065, USA
    Neuroinformatics 7:165-78. 2009
  9. pmc Dynamic programming algorithms for comparing multineuronal spike trains via cost-based metrics and alignments
    Jonathan D Victor
    Department of Neurology and Neuroscience, Weill Medical College of Cornell University, 1300 York Avenue, New York City, NY 10021, USA
    J Neurosci Methods 161:351-60. 2007
  10. pmc Petilla terminology: nomenclature of features of GABAergic interneurons of the cerebral cortex
    Giorgio A Ascoli
    Molecular Neuroscience Department and Center for Neural Informatics, Structures, and Plasticity, Krasnow Institute for Advanced Study, George Mason University, MS2A1, 4400 University Drive, Fairfax, Virginia 22030, USA
    Nat Rev Neurosci 9:557-68. 2008

Detail Information

Publications10

  1. pmc Common data model for neuroscience data and data model exchange
    D Gardner
    Weill Medical College of Cornell University, and New York University School of Medicine, New York, NY 10021, USA
    J Am Med Inform Assoc 8:17-33. 2001
    ..Generalizing the data models underlying two prototype neurophysiology databases, the authors describe and propose the Common Data Model (CDM) as a framework for federating a broad spectrum of disparate neuroscience information resources...
  2. pmc Dynamic publication model for neurophysiology databases
    D Gardner
    Department of Physiology, Weill Medical College of Cornell University, 1300 York Avenue, New York, NY 10021 48 05, USA
    Philos Trans R Soc Lond B Biol Sci 356:1229-47. 2001
    ..Copyright is retained by submitters; viewer displays are dynamic and do not violate copyright of related journal figures. Panels of neurophysiologists view and test schemas and tools, enhancing community support...
  3. ncbi request reprint Towards effective and rewarding data sharing
    Daniel Gardner
    Laboratory of Neuroinformatics, Department of Physiology and Biophysics, Weill Medical College of Cornell University, NewYork, NY 10021, USA
    Neuroinformatics 1:289-95. 2003
  4. ncbi request reprint Neurodatabase.org: networking the microelectrode
    Daniel Gardner
    Laboratory of Neuroinformatics, Department of Physiology, Weill Medical College of Cornell University, New York, New York 10021, USA
    Nat Neurosci 7:486-7. 2004
  5. ncbi request reprint A gateway to the future of neuroinformatics
    Daniel Gardner
    Laboratory of Neuroinformatics, Department of Physiology and Biophysics, Weill Medical College of Cornell University, NY, USA
    Neuroinformatics 2:271-4. 2004
  6. pmc The neuroscience information framework: a data and knowledge environment for neuroscience
    Daniel Gardner
    Laboratory of Neuroinformatics and Department of Physiology, Weill Medical College, Cornell University, 1300 York Avenue, New York, NY, 10065, USA
    Neuroinformatics 6:149-60. 2008
    ..Evolving instantiations of the Framework may be viewed at http://nif.nih.gov , http://neurogateway.org , and other sites as they come on line...
  7. pmc Terminology for neuroscience data discovery: multi-tree syntax and investigator-derived semantics
    Daniel Gardner
    Laboratory of Neuroinformatics and Department of Physiology, Weill Medical College of Cornell University, 1300 York Avenue, New York, NY, 10065, USA
    Neuroinformatics 6:161-74. 2008
    ..Workshop-derived integrated term lists are available Open Source at http://brainml.org ; a complete list of participants is at http://brainml.org/workshops...
  8. pmc Spike train analysis toolkit: enabling wider application of information-theoretic techniques to neurophysiology
    David H Goldberg
    Laboratory of Neuroinformatics D 404 and Department of Physiology, Weill Medical College of Cornell University, 1300 York Avenue, New York, NY 10065, USA
    Neuroinformatics 7:165-78. 2009
    ..org , maintained as a resource for the computational neuroscience and neuroinformatics communities. Use cases drawn from somatosensory and gustatory neurophysiology, and community use of STAToolkit, demonstrate its utility and scope...
  9. pmc Dynamic programming algorithms for comparing multineuronal spike trains via cost-based metrics and alignments
    Jonathan D Victor
    Department of Neurology and Neuroscience, Weill Medical College of Cornell University, 1300 York Avenue, New York City, NY 10021, USA
    J Neurosci Methods 161:351-60. 2007
    ..The generalized algorithm provides the means to test a wide range of coding hypotheses...
  10. pmc Petilla terminology: nomenclature of features of GABAergic interneurons of the cerebral cortex
    Giorgio A Ascoli
    Molecular Neuroscience Department and Center for Neural Informatics, Structures, and Plasticity, Krasnow Institute for Advanced Study, George Mason University, MS2A1, 4400 University Drive, Fairfax, Virginia 22030, USA
    Nat Rev Neurosci 9:557-68. 2008
    ..Consistent adoption will be important for the success of such an initiative, and we also encourage the active involvement of the broader scientific community in the dynamic evolution of this project...