Xiaodong Wang

Summary

Affiliation: Columbia University
Country: USA

Publications

  1. pmc Hierarchical Dirichlet process model for gene expression clustering
    Liming Wang
    Department of Electrical Engineering, Columbia University, New York, NY, 10027, USA
    EURASIP J Bioinform Syst Biol 2013:5. 2013
  2. pmc Identification of gene interactions associated with disease from gene expression data using synergy networks
    John Watkinson
    Center for Computational Biology and Bioinformatics and Department of Electrical Engineering, Columbia University, 500 West 120th Street, New York, NY 10027, USA
    BMC Syst Biol 2:10. 2008
  3. pmc Robust discovery of periodically expressed genes using the laplace periodogram
    Kuo Ching Liang
    Department of Electrical Engineering, Columbia University, New York, NY 10027, USA
    BMC Bioinformatics 10:15. 2009

Collaborators

  • Liming Wang
  • Kuo Ching Liang
  • John Watkinson
  • Ta Hsin Li
  • Dimitris Anastassiou
  • Tian Zheng

Detail Information

Publications3

  1. pmc Hierarchical Dirichlet process model for gene expression clustering
    Liming Wang
    Department of Electrical Engineering, Columbia University, New York, NY, 10027, USA
    EURASIP J Bioinform Syst Biol 2013:5. 2013
    ..For the yeast cell cycle data, we compare the HDP result to the standard result and show that the HDP algorithm provides more information and reduces the unnecessary clustering fragments...
  2. pmc Identification of gene interactions associated with disease from gene expression data using synergy networks
    John Watkinson
    Center for Computational Biology and Bioinformatics and Department of Electrical Engineering, Columbia University, 500 West 120th Street, New York, NY 10027, USA
    BMC Syst Biol 2:10. 2008
    ..If, however, the aim is the discovery of disease-related biological mechanisms, then the criterion for defining such interactions must be specifically linked to disease...
  3. pmc Robust discovery of periodically expressed genes using the laplace periodogram
    Kuo Ching Liang
    Department of Electrical Engineering, Columbia University, New York, NY 10027, USA
    BMC Bioinformatics 10:15. 2009
    ..The detection of genes that are periodically expressed is an important step which allows us to study the regulatory mechanisms associated with the cell cycle...