Phil Carter

Summary

Affiliation: Columbia University
Country: USA

Publications

  1. pmc PEP: Predictions for Entire Proteomes
    Phil Carter
    CUBIC, Department of Biochemistry and Molecular Biophysics, Columbia University, 650 West 168th Street BB217, New York, NY 10032, USA
    Nucleic Acids Res 31:410-3. 2003
  2. pmc DSSPcont: Continuous secondary structure assignments for proteins
    Phil Carter
    CUBIC, Department of Biochemistry and Molecular Biophysics, Columbia University, 650 West 168th Street BB217, New York, NY 10032, USA
    Nucleic Acids Res 31:3293-5. 2003
  3. pmc NLSdb: database of nuclear localization signals
    Rajesh Nair
    CUBIC, Department of Biochemistry and Molecular Biophysics, Columbia University, BB217, 650 West 168th Street, New York, NY 10032, USA
    Nucleic Acids Res 31:397-9. 2003
  4. ncbi The protein target list of the Northeast Structural Genomics Consortium
    Zeba Wunderlich
    Proteins 56:181-7. 2004
  5. ncbi Protein-protein docking using 3D-Dock in rounds 3, 4, and 5 of CAPRI
    Phil Carter
    Department of Biological Sciences, Imperial College, London, United Kingdom
    Proteins 60:281-8. 2005
  6. pmc Elucidating global epidemiology of Burkholderia multivorans in cases of cystic fibrosis by multilocus sequence typing
    Adam Baldwin
    Department of Biological Sciences, University of Warwick, Coventry CV4 7AL, United Kingdom
    J Clin Microbiol 46:290-5. 2008

Collaborators

Detail Information

Publications6

  1. pmc PEP: Predictions for Entire Proteomes
    Phil Carter
    CUBIC, Department of Biochemistry and Molecular Biophysics, Columbia University, 650 West 168th Street BB217, New York, NY 10032, USA
    Nucleic Acids Res 31:410-3. 2003
    ..The PEP database, fragments and clusters are distributed freely as a set of flat files and have been integrated into SRS. The PEP group of databases can be accessed from: http://cubic.bioc.columbia.edu/pep...
  2. pmc DSSPcont: Continuous secondary structure assignments for proteins
    Phil Carter
    CUBIC, Department of Biochemistry and Molecular Biophysics, Columbia University, 650 West 168th Street BB217, New York, NY 10032, USA
    Nucleic Acids Res 31:3293-5. 2003
    ..Therefore, functionally important variation can be extracted from a single X-ray structure using the continuous assignment procedure...
  3. pmc NLSdb: database of nuclear localization signals
    Rajesh Nair
    CUBIC, Department of Biochemistry and Molecular Biophysics, Columbia University, BB217, 650 West 168th Street, New York, NY 10032, USA
    Nucleic Acids Res 31:397-9. 2003
    ..NLS motifs often co-localize with DNA-binding regions. This observation was used to also annotate over 1500 DNA-binding proteins. NLSdb can be accessed via the web site: http://cubic.bioc.columbia.edu/db/NLSdb/...
  4. ncbi The protein target list of the Northeast Structural Genomics Consortium
    Zeba Wunderlich
    Proteins 56:181-7. 2004
  5. ncbi Protein-protein docking using 3D-Dock in rounds 3, 4, and 5 of CAPRI
    Phil Carter
    Department of Biological Sciences, Imperial College, London, United Kingdom
    Proteins 60:281-8. 2005
    ..These were a nidogen-laminin complex for target 8 (T08) and a serine-threonine phosphatase bound to a targeting subunit (T14). For a further three target systems, we produced models that were rated as acceptable predictions...
  6. pmc Elucidating global epidemiology of Burkholderia multivorans in cases of cystic fibrosis by multilocus sequence typing
    Adam Baldwin
    Department of Biological Sciences, University of Warwick, Coventry CV4 7AL, United Kingdom
    J Clin Microbiol 46:290-5. 2008
    ..multivorans...