Jonathan E Bronson

Summary

Affiliation: Columbia University
Country: USA

Publications

  1. pmc Transfer RNA-mediated regulation of ribosome dynamics during protein synthesis
    Jingyi Fei
    Department of Chemistry, Columbia University, New York, New York, USA
    Nat Struct Mol Biol 18:1043-51. 2011
  2. pmc Graphical models for inferring single molecule dynamics
    Jonathan E Bronson
    Department of Chemistry, Columbia University, New York, NY 10027, USA
    BMC Bioinformatics 11:S2. 2010
  3. pmc Learning rates and states from biophysical time series: a Bayesian approach to model selection and single-molecule FRET data
    Jonathan E Bronson
    Department of Chemistry, Columbia University, New York, New York, USA
    Biophys J 97:3196-205. 2009
  4. pmc Allosteric collaboration between elongation factor G and the ribosomal L1 stalk directs tRNA movements during translation
    Jingyi Fei
    Department of Chemistry, Columbia University, New York, NY 10027, USA
    Proc Natl Acad Sci U S A 106:15702-7. 2009
  5. pmc Empirical Bayes methods enable advanced population-level analyses of single-molecule FRET experiments
    Jan Willem van de Meent
    Department of Statistics, Columbia University, New York, New York
    Biophys J 106:1327-37. 2014

Collaborators

  • Jake M Hofman
  • Jingyi Fei
  • Ruben L Gonzalez
  • Jan Willem van de Meent
  • Chris H Wiggins
  • Arianne C Richard
  • Rathi L Srinivas

Detail Information

Publications5

  1. pmc Transfer RNA-mediated regulation of ribosome dynamics during protein synthesis
    Jingyi Fei
    Department of Chemistry, Columbia University, New York, New York, USA
    Nat Struct Mol Biol 18:1043-51. 2011
    ..Notably, our results suggest that the conformational flexibility of the tRNA molecule has a crucial role in directing the structural dynamics of the PRE complex during translocation...
  2. pmc Graphical models for inferring single molecule dynamics
    Jonathan E Bronson
    Department of Chemistry, Columbia University, New York, NY 10027, USA
    BMC Bioinformatics 11:S2. 2010
    ..A detailed description of smFRET is provided as well...
  3. pmc Learning rates and states from biophysical time series: a Bayesian approach to model selection and single-molecule FRET data
    Jonathan E Bronson
    Department of Chemistry, Columbia University, New York, New York, USA
    Biophys J 97:3196-205. 2009
    ..Source code used in this analysis, including a graphical user interface, is available open source via http://vbFRET.sourceforge.net...
  4. pmc Allosteric collaboration between elongation factor G and the ribosomal L1 stalk directs tRNA movements during translation
    Jingyi Fei
    Department of Chemistry, Columbia University, New York, NY 10027, USA
    Proc Natl Acad Sci U S A 106:15702-7. 2009
    ..Collectively, our data demonstrate that EF-G and the L1 stalk allosterically collaborate to direct tRNA translocation from the P to the E sites, and suggest a model for the release of E-site tRNA...
  5. pmc Empirical Bayes methods enable advanced population-level analyses of single-molecule FRET experiments
    Jan Willem van de Meent
    Department of Statistics, Columbia University, New York, New York
    Biophys J 106:1327-37. 2014
    ..The code used to perform this analysis and a basic graphical user interface front end are available as open source software...