DARIYA MALYARENKO

Summary

Affiliation: College of William and Mary
Country: USA

Publications

  1. ncbi Enhancement of sensitivity and resolution of surface-enhanced laser desorption/ionization time-of-flight mass spectrometric records for serum peptides using time-series analysis techniques
    Dariya I Malyarenko
    Departments of Applied Science, The College of William and Mary, Williamsburg, VA 23187 8795, USA
    Clin Chem 51:65-74. 2005
  2. ncbi Automated assignment of ionization states in broad-mass matrix-assisted laser desorption/ionization spectra of protein mixtures
    Dariya I Malyarenko
    Department of Applied Science, College of William and Mary, Williamsburg, VA 23187 8795, USA
    Rapid Commun Mass Spectrom 24:138-46. 2010
  3. ncbi A Bayesian network approach to feature selection in mass spectrometry data
    Karl W Kuschner
    Department of Physics, The College of William and Mary, Williamsburg, VA, USA
    BMC Bioinformatics 11:177. 2010
  4. ncbi Deconvolution filters to enhance resolution of dense time-of-flight survey spectra in the time-lag optimization range
    Dariya I Malyarenko
    Departments of Physics and Applied Science, College of William and Mary, Williamsburg, VA 23187 8795, USA
    Rapid Commun Mass Spectrom 20:1661-9. 2006
  5. ncbi Resampling and deconvolution of linear time-of-flight records for enhanced protein profiling
    Dariya I Malyarenko
    Departments of Physics and Applied Science, College of William and Mary, Williamsburg, VA 23187 8795, USA
    Rapid Commun Mass Spectrom 20:1670-8. 2006
  6. ncbi Optimization of MALDI-TOF MS detection for enhanced sensitivity of affinity-captured proteins spanning a 100 kDa mass range
    Christine L Gatlin-Bunai
    Department of Applied Science, The College of William and Mary, Williamsburg, Virginia 23185, USA
    J Proteome Res 6:4517-24. 2007
  7. ncbi Precision enhancement of MALDI-TOF MS using high resolution peak detection and label-free alignment
    Maureen B Tracy
    William and Mary Research Institute, College of William and Mary, Williamsburg, VA, USA
    Proteomics 8:1530-8. 2008

Research Grants

  1. Enhancement of MS signal processing toward improved cancer biomarker discovery
    DARIYA MALYARENKO; Fiscal Year: 2009

Collaborators

Detail Information

Publications7

  1. ncbi Enhancement of sensitivity and resolution of surface-enhanced laser desorption/ionization time-of-flight mass spectrometric records for serum peptides using time-series analysis techniques
    Dariya I Malyarenko
    Departments of Applied Science, The College of William and Mary, Williamsburg, VA 23187 8795, USA
    Clin Chem 51:65-74. 2005
    ..Many of these effects can be reduced by processing the signal using standard time-series background subtraction, calibration, and filtering techniques...
  2. ncbi Automated assignment of ionization states in broad-mass matrix-assisted laser desorption/ionization spectra of protein mixtures
    Dariya I Malyarenko
    Department of Applied Science, College of William and Mary, Williamsburg, VA 23187 8795, USA
    Rapid Commun Mass Spectrom 24:138-46. 2010
    ..The described automated procedure improves the analysis and dimension reduction of MS data for comparative proteomics applications...
  3. ncbi A Bayesian network approach to feature selection in mass spectrometry data
    Karl W Kuschner
    Department of Physics, The College of William and Mary, Williamsburg, VA, USA
    BMC Bioinformatics 11:177. 2010
    ....
  4. ncbi Deconvolution filters to enhance resolution of dense time-of-flight survey spectra in the time-lag optimization range
    Dariya I Malyarenko
    Departments of Physics and Applied Science, College of William and Mary, Williamsburg, VA 23187 8795, USA
    Rapid Commun Mass Spectrom 20:1661-9. 2006
    ..The net result of the application of these filters is that we can identify new structures in dense MALDI-TOF data, clearly showing small adducts to heavy biomolecules...
  5. ncbi Resampling and deconvolution of linear time-of-flight records for enhanced protein profiling
    Dariya I Malyarenko
    Departments of Physics and Applied Science, College of William and Mary, Williamsburg, VA 23187 8795, USA
    Rapid Commun Mass Spectrom 20:1670-8. 2006
    ..This approach is particularly appropriate for automated data analysis and peak detection in dense TOF spectra...
  6. ncbi Optimization of MALDI-TOF MS detection for enhanced sensitivity of affinity-captured proteins spanning a 100 kDa mass range
    Christine L Gatlin-Bunai
    Department of Applied Science, The College of William and Mary, Williamsburg, Virginia 23185, USA
    J Proteome Res 6:4517-24. 2007
    ..This enhancement in broad mass range detection of protein signals will be of direct benefit in MS expression profiling studies requiring full linear range mass detection...
  7. ncbi Precision enhancement of MALDI-TOF MS using high resolution peak detection and label-free alignment
    Maureen B Tracy
    William and Mary Research Institute, College of William and Mary, Williamsburg, VA, USA
    Proteomics 8:1530-8. 2008
    ..We show that the CV for m/z is 0.01% (100 ppm) for 12 out of the 13 peaks that were observed in all datasets between 2995 and 9297 Da...

Research Grants4

  1. Enhancement of MS signal processing toward improved cancer biomarker discovery
    DARIYA MALYARENKO; Fiscal Year: 2009
    ....