Research Topics
Genomes and Genes | Li ZhengSummaryAffiliation: City of Hope National Medical Center Country: USA Publications
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Detail Information
Publications
Polyploid cells rewire DNA damage response networks to overcome replication stress-induced barriers for tumour progressionLi Zheng
Department of Cancer Biology, City of Hope National Medical Center and Beckman Research Institute, 1500 East Duarte Road, Duarte, California 91010, USA
Nat Commun 3:815. 2012..These molecular changes rewire DNA damage response and repair gene networks in polyploid tumour cells, enabling them to escape replication stress-induced senescence barriers...
Fen1 mutations that specifically disrupt its interaction with PCNA cause aneuploidy-associated cancerLi Zheng
Department of Cancer Biology, City of Hope National Medical Center and Beckman Research Institute, Duarte, CA 91010, USA
Cell Res 21:1052-67. 2011..Thus, this study establishes an exemplary case for investigating the biological significance of protein-protein interactions by knock-in of a point mutation rather than knock-out of a whole gene...
Methylation of FEN1 suppresses nearby phosphorylation and facilitates PCNA bindingZhigang Guo
Department of Cancer Biology, City of Hope National Medical Center and Beckman Research Institute, Duarte, California, USA
Nat Chem Biol 6:766-73. 2010..This consequently leads to a defect in Okazaki fragment maturation, a delay in cell cycle progression, impairment of DNA repair and a high frequency of genome-wide mutations...
Complementary functions of the Saccharomyces cerevisiae Rad2 family nucleases in Okazaki fragment maturation, mutation avoidance, and chromosome stabilityXuemin Sun
Division of Molecular Biology, City of Hope National Medical Center, Duarte, CA 91010, USA
DNA Repair (Amst) 2:925-40. 2003..Furthermore, Rad2 and Exo1 complemented the mutator phenotypes and cell cycle defects of rad27 mutant strains to differing extents, suggesting distinct in vivo nucleic acid substrates...
The DNA-protein interaction modes of FEN-1 with gap substrates and their implication in preventing duplication mutationsRen Liu
Department of Radiation Biology, City of Hope National Medical Center and Beckman Research Institute, Duarte, CA 91010, USA
Nucleic Acids Res 34:1772-84. 2006..Furthermore, based on the evidence that GEN activity in complex with WRN protein cleaves hairpin and internal loop substrates, we suggest that the GEN activity may prevent repeat expansions and duplication mutations...
Nucleolar localization and dynamic roles of flap endonuclease 1 in ribosomal DNA replication and damage repairZhigang Guo
Department of Radiation Biology, City of Hope National Medical Center and Beckman Research Institute, 1500 East Duarte Road, Duarte, CA 91010, USA
Mol Cell Biol 28:4310-9. 2008..The replacement of Ser(187) by Ala, eliminating the only phosphorylation site, retains FEN1 in nucleoli. Both of the mutations cause UV sensitivity, impair cellular UV damage repair capacity, and decline overall cellular survivorship...
Human DNA2 is a mitochondrial nuclease/helicase for efficient processing of DNA replication and repair intermediatesLi Zheng
Department of Radiation Biology, City of Hope National Medical Center and Beckman Research Institute, Duarte, CA 91010, USA
Mol Cell 32:325-36. 2008..Taken together, our studies illustrate an evolutionarily diversified role of hDNA2 in mitochondrial DNA replication and repair in a mammalian system...
Interaction and stimulation of human FEN-1 nuclease activities by heterogeneous nuclear ribonucleoprotein A1 in alpha-segment processing during Okazaki fragment maturationQing Chai
Division of Molecular Biology, City of Hope National Medical Center and Beckman Research Institute, Duarte, California 91010, USA
Biochemistry 42:15045-52. 2003..With longer flap substrates the hnRNP A1 effect is more modest and is suppressed by the addition of RPA. A model is provided to explain the possible in vivo role of this interaction and activity in Okazaki fragment maturation...
Concerted action of exonuclease and Gap-dependent endonuclease activities of FEN-1 contributes to the resolution of triplet repeat sequences (CTG)n- and (GAA)n-derived secondary structures formed during maturation of Okazaki fragmentsPurnima Singh
Department of Radiation Biology, City of Hope National Medical Center and Beckman Research Institute, Duarte, California 91010, USA
J Biol Chem 282:3465-77. 2007..A model is presented to explain how the concerted action of EXO and GEN activities may contribute to resolving structured flaps, thereby preventing their expansion in the genome...
Fen1 mutations result in autoimmunity, chronic inflammation and cancersLi Zheng
Department of Radiation Biology, City of Hope National Medical Center and Beckman Research Institute, 1500 East Duarte Road, Duarte, California 91010, USA
Nat Med 13:812-9. 2007....
Novel function of the flap endonuclease 1 complex in processing stalled DNA replication forksLi Zheng
Department of Radiation Biology, City of Hope National Medical Center and Beckman Research Institute, Duarte, California 91010, USA
EMBO Rep 6:83-9. 2005..Replication protein A facilitates FEN-1 interaction with DNA bubble structures. Human FEN-1, but not the GEN-deficient mutant, E178A, was shown to rescue the defect in resistance to UV and camptothecin in a yeast FEN-1 null mutant...
Disruption of the FEN-1/PCNA interaction results in DNA replication defects, pulmonary hypoplasia, pancytopenia, and newborn lethality in miceLi Zheng
City of Hope National Medical Center, Department of Molecular Biology, 1500 East Duarte Rd, Duarte, CA 91010, USA
Mol Cell Biol 27:3176-86. 2007..All newborn FFAA mutant pups died at birth, likely due to pulmonary hypoplasia and pancytopenia. Collectively, our data demonstrate the importance of the FEN-1/PCNA complex in DNA replication and in the embryonic development of mice...
High risk of benzo[α]pyrene-induced lung cancer in E160D FEN1 mutant miceZhenxing Wu
Colleges of Life Sciences, Zhejiang University, Hangzhou, Zhejiang, China
Mutat Res 731:85-91. 2012..All together, our current study suggests that individuals carrying the GEN-deficient FEN1 mutations have high risk to develop lung cancer upon exposure to B[α]P-containing agents such as tobacco smoke...
Multiple but dissectible functions of FEN-1 nucleases in nucleic acid processing, genome stability and diseasesBinghui Shen
Department of Radiation Biology, City of Hope National Medical Center and Beckman Research Institute, Duarte, CA 91010, USA
Bioessays 27:717-29. 2005..This review summarizes the knowledge gained through efforts in the past decade to define its structural elements for specific activities and possible pathological consequences of altered functions of this multirole player...
Human DNA polymerase beta polymorphism, Arg137Gln, impairs its polymerase activity and interaction with PCNA and the cellular base excision repair capacityZhigang Guo
Department of Radiation Biology, City of Hope National Medical Center, Beckman Research Institute, Duarte, CA 91010, USA
Nucleic Acids Res 37:3431-41. 2009..These data indicate that polymorphisms in base excision repair genes may contribute to the onset and development of cancers...
Sequential posttranslational modifications program FEN1 degradation during cell-cycle progressionZhigang Guo
Jiangsu Key Laboratory for Molecular and Medical Biotechnology and College of Life Sciences, Nanjing Normal University, Nanjing 210046, China
Mol Cell 47:444-56. 2012..These findings may represent a newly identified regulatory mechanism used by cells to ensure precise cell-cycle progression and to prevent transformation...
Okazaki fragment maturation: nucleases take centre stageLi Zheng
Department of Cancer Biology, City of Hope National Medical Center and Beckman Research Institute, Duarte, CA 91010, USA
J Mol Cell Biol 3:23-30. 2011..On the other hand, mutations that impair editing out of polymerase α incorporation errors result in cancer displaying a strong mutator phenotype...
Suppression of Saccharomyces cerevisiae rad27 null mutant phenotypes by the 5' nuclease domain of Escherichia coli DNA polymerase IXuemin Sun
Division of Molecular Medicine, City of Hope National Medical Center and Beckman Research Institute, Duarte, CA 91010, USA
Curr Genet 41:379-88. 2002..We conclude that the N-terminal nuclease domain of E. coli polymerase I encodes a functional homologue of FEN-1...
Functional alterations of human exonuclease 1 mutants identified in atypical hereditary nonpolyposis colorectal cancer syndromeXuemin Sun
Division of Molecular Medicine, City of Hope National Medical Center and Beckman Research Institute, Duarte, California 91010, USA
Cancer Res 62:6026-30. 2002..The combination of these three point mutations leads to the binding capacity with hMsh2 to nearly zero. Evidence made available in this study sheds light on the pathogenesis of HNPCC, perhaps initiated by an additional MMR gene, hEXO1...
Human 3-methyladenine-DNA glycosylase: effect of sequence context on excision, association with PCNA, and stimulation by AP endonucleaseLiqun Xia
Biology Division, Beckman Research Institute, City of Hope National Medical Center, 1450 East Duarte Road, Duarte, CA 91010, USA
J Mol Biol 346:1259-74. 2005..Thus, PCNA could have a role in short-patch BER as well as in long-patch BER. Overall, the data reported here show how multiple factors contribute to the activity of MPG in cells...
Distinct roles of two Mg2+ binding sites in regulation of murine flap endonuclease-1 activitiesLi Zheng
Division of Molecular Medicine, City of Hope National Medical Center and Beckman Research Institute, Duarte, California 91010, USA
Biochemistry 41:10323-31. 2002..Taken together, our results suggest distinct roles for two Mg(2+) binding sites in the regulation of mFEN-1 nuclease activities in a mode different from the "two-metal mechanism"...
