Xiangdong Liu

Summary

Affiliation: Cincinnati Children's Hospital Medical Center
Country: USA

Publications

  1. ncbi Bayesian hierarchical model for transcriptional module discovery by jointly modeling gene expression and ChIP-chip data
    Xiangdong Liu
    Department of Environmental Health, University of Cincinnati, 3223 Eden Ave, ML 56, Cincinnati, Ohio 45267, USA
    BMC Bioinformatics 8:283. 2007
  2. ncbi Genomewide analysis of aryl hydrocarbon receptor binding targets reveals an extensive array of gene clusters that control morphogenetic and developmental programs
    Maureen A Sartor
    Laboratory for Statistical Genomics and Systems Biology, Department of Environmental Health and Center for Environmental Genetics, University of Cincinnati College of Medicine, Cincinnati, Ohio 45220, USA
    Environ Health Perspect 117:1139-46. 2009
  3. ncbi Molecular characterization of the porcine GBP1 and GBP2 genes
    Guojian Ma
    Key Lab of Agricultural Animal Genetics, Breeding, and Reproduction of Ministry of Education and Key Laboratory of Swine Genetics and Breeding of Ministry of Agriculture, Huazhong Agricultural University, Wuhan, Hubei, PR China
    Mol Immunol 45:2797-807. 2008
  4. ncbi Role of SHP-2 in fibroblast growth factor receptor-mediated suppression of myogenesis in C2C12 myoblasts
    Maria I Kontaridis
    Department of Pharmacology, Yale University School of Medicine, New Haven, Connecticut 06520 8066, USA
    Mol Cell Biol 22:3875-91. 2002
  5. ncbi Differential patterns of human cytomegalovirus gene expression in various T-cell lines carrying human T-cell leukemia-lymphoma virus type I: role of Tax-activated cellular transcription factors
    Zoltan Beck
    Institute of Medical Microbiology, Medical and Health Science Center, University of Debrecen, Debrecen, Hungary
    J Med Virol 71:94-104. 2003
  6. ncbi DHPC: a new tool to express genome structural features
    Xuegong Deng
    State Key Laboratory of Agrobiotechnology and Key Laboratory of Animal Genetics and Breeding of the Ministry of Agriculture, China Agricultural University, Beijing 100094, China
    Genomics 91:476-83. 2008

Collaborators

Detail Information

Publications6

  1. ncbi Bayesian hierarchical model for transcriptional module discovery by jointly modeling gene expression and ChIP-chip data
    Xiangdong Liu
    Department of Environmental Health, University of Cincinnati, 3223 Eden Ave, ML 56, Cincinnati, Ohio 45267, USA
    BMC Bioinformatics 8:283. 2007
    ..The optimal approach to joint modeling of data generated by these two complementary biological assays, with the goal of identifying and characterizing TMs, is an important open problem in computational biomedicine...
  2. ncbi Genomewide analysis of aryl hydrocarbon receptor binding targets reveals an extensive array of gene clusters that control morphogenetic and developmental programs
    Maureen A Sartor
    Laboratory for Statistical Genomics and Systems Biology, Department of Environmental Health and Center for Environmental Genetics, University of Cincinnati College of Medicine, Cincinnati, Ohio 45220, USA
    Environ Health Perspect 117:1139-46. 2009
    ..The naive receptor is believed to reside in an inactive cytosolic complex that translocates to the nucleus and induces transcription of xenobiotic detoxification genes after activation by ligand...
  3. ncbi Molecular characterization of the porcine GBP1 and GBP2 genes
    Guojian Ma
    Key Lab of Agricultural Animal Genetics, Breeding, and Reproduction of Ministry of Education and Key Laboratory of Swine Genetics and Breeding of Ministry of Agriculture, Huazhong Agricultural University, Wuhan, Hubei, PR China
    Mol Immunol 45:2797-807. 2008
    ..Association analyses revealed that the poGBP1 Eco81I and poGBP2 SspI polymorphisms both had significant associations (p<0.05) with red blood cell count (RBC), haemoglobin concentration (HGB) and hematocrit (HCT) of 17-day-old pigs...
  4. ncbi Role of SHP-2 in fibroblast growth factor receptor-mediated suppression of myogenesis in C2C12 myoblasts
    Maria I Kontaridis
    Department of Pharmacology, Yale University School of Medicine, New Haven, Connecticut 06520 8066, USA
    Mol Cell Biol 22:3875-91. 2002
    ..We propose that SHP-2 plays a pivotal role in FGFR signaling in myoblasts via both Erk-dependent and Erk-independent pathways...
  5. ncbi Differential patterns of human cytomegalovirus gene expression in various T-cell lines carrying human T-cell leukemia-lymphoma virus type I: role of Tax-activated cellular transcription factors
    Zoltan Beck
    Institute of Medical Microbiology, Medical and Health Science Center, University of Debrecen, Debrecen, Hungary
    J Med Virol 71:94-104. 2003
    ..The results of this study provide possible mechanisms whereby HCMV infections might imply suppression of adult T-cell leukemia...
  6. ncbi DHPC: a new tool to express genome structural features
    Xuegong Deng
    State Key Laboratory of Agrobiotechnology and Key Laboratory of Animal Genetics and Breeding of the Ministry of Agriculture, China Agricultural University, Beijing 100094, China
    Genomics 91:476-83. 2008
    ..We also present several genome curves generated by DHPC to demonstrate how DHPC can be used to find previously unidentified sequence features in these genomes...