Lucia Carbone

Summary

Affiliation: Children's Hospital Oakland Research Institute
Country: USA

Publications

  1. pmc Independent centromere formation in a capricious, gene-free domain of chromosome 13q21 in Old World monkeys and pigs
    Maria Francesca Cardone
    Department of Genetics and Microbiology, University of Bari, Bari, Italy
    Genome Biol 7:R91. 2006
  2. pmc A high-resolution map of synteny disruptions in gibbon and human genomes
    Lucia Carbone
    BACPAC Resources, Children s Hospital of Oakland Research Institute, Oakland, California, United States of America
    PLoS Genet 2:e223. 2006
  3. pmc Evolutionary breakpoints in the gibbon suggest association between cytosine methylation and karyotype evolution
    Lucia Carbone
    Children s Hospital and Research Center Oakland, Oakland, California, United States of America
    PLoS Genet 5:e1000538. 2009
  4. pmc A chromosomal inversion unique to the northern white-cheeked gibbon
    Lucia Carbone
    BACPAC Resources, Children s Hospital of Oakland Research Institute, Oakland, California, United States of America
    PLoS ONE 4:e4999. 2009
  5. pmc Incomplete lineage sorting is common in extant gibbon genera
    Jeffrey D Wall
    Institute for Human Genetics, University of California San Francisco, San Francisco, California, United States of America
    PLoS ONE 8:e53682. 2013
  6. pmc Centromere remodeling in Hoolock leuconedys (Hylobatidae) by a new transposable element unique to the gibbons
    Lucia Carbone
    Children s Hospital Oakland Research Institute, Oakland, CA, USA
    Genome Biol Evol 4:648-58. 2012
  7. pmc Isolation of specific clones from nonarrayed BAC libraries through homologous recombination
    Mikhail Nefedov
    BACPAC Resources, Children s Hospital Oakland Research Institute, 747 52nd St, Oakland, CA 94609, USA
    J Biomed Biotechnol 2011:560124. 2011
  8. pmc Large-scale variation among human and great ape genomes determined by array comparative genomic hybridization
    Devin P Locke
    Department of Genetics, Case Western Reserve University School of Medicine and University Hospitals of Cleveland, Cleveland, Ohio 44106, USA
    Genome Res 13:347-57. 2003
  9. ncbi request reprint Evolutionary movement of centromeres in horse, donkey, and zebra
    Lucia Carbone
    Department of Genetics and Microbiology, University of Bari, Via Amendola 165 A, 70126 Bari, Italy
    Genomics 87:777-82. 2006
  10. pmc Recurrent sites for new centromere seeding
    Mario Ventura
    Sezione di Genetica Dipartimento di Anatomia Patologica e Genetica, University of Bari, 70126 Bari, Italy
    Genome Res 14:1696-703. 2004

Detail Information

Publications11

  1. pmc Independent centromere formation in a capricious, gene-free domain of chromosome 13q21 in Old World monkeys and pigs
    Maria Francesca Cardone
    Department of Genetics and Microbiology, University of Bari, Bari, Italy
    Genome Biol 7:R91. 2006
    ....
  2. pmc A high-resolution map of synteny disruptions in gibbon and human genomes
    Lucia Carbone
    BACPAC Resources, Children s Hospital of Oakland Research Institute, Oakland, California, United States of America
    PLoS Genet 2:e223. 2006
    ..We speculate that the extraordinarily high level of rearrangements seen in gibbons may be due to factors that increase the incidence of chromosome breakage or fixation of the derivative chromosomes in a homozygous state...
  3. pmc Evolutionary breakpoints in the gibbon suggest association between cytosine methylation and karyotype evolution
    Lucia Carbone
    Children s Hospital and Research Center Oakland, Oakland, California, United States of America
    PLoS Genet 5:e1000538. 2009
    ..The association between undermethylation and chromosomal rearrangement in gibbons suggests a correlation between epigenetic state and structural genome variation in evolution...
  4. pmc A chromosomal inversion unique to the northern white-cheeked gibbon
    Lucia Carbone
    BACPAC Resources, Children s Hospital of Oakland Research Institute, Oakland, California, United States of America
    PLoS ONE 4:e4999. 2009
    ..Our results demonstrate the important role of genomics in providing tools for conservation efforts...
  5. pmc Incomplete lineage sorting is common in extant gibbon genera
    Jeffrey D Wall
    Institute for Human Genetics, University of California San Francisco, San Francisco, California, United States of America
    PLoS ONE 8:e53682. 2013
    ..This uncertainty is due to short internal branch lengths and extensive incomplete lineage sorting across taxa. The true phylogenetic relationships among gibbon genera will likely require a more extensive whole-genome sequence analysis...
  6. pmc Centromere remodeling in Hoolock leuconedys (Hylobatidae) by a new transposable element unique to the gibbons
    Lucia Carbone
    Children s Hospital Oakland Research Institute, Oakland, CA, USA
    Genome Biol Evol 4:648-58. 2012
    ..The similarity between the two phenomena is consistent with the hypothesis that evolution of the gibbons is characterized by defects in epigenetic repression of TEs, perhaps triggered by interspecific hybridization...
  7. pmc Isolation of specific clones from nonarrayed BAC libraries through homologous recombination
    Mikhail Nefedov
    BACPAC Resources, Children s Hospital Oakland Research Institute, 747 52nd St, Oakland, CA 94609, USA
    J Biomed Biotechnol 2011:560124. 2011
    ..In addition, the screening can be conceivably combined with genetic engineering to create knockout and reporter constructs for functional studies...
  8. pmc Large-scale variation among human and great ape genomes determined by array comparative genomic hybridization
    Devin P Locke
    Department of Genetics, Case Western Reserve University School of Medicine and University Hospitals of Cleveland, Cleveland, Ohio 44106, USA
    Genome Res 13:347-57. 2003
    ..In contrast to previous cytogenetic and comparative mapping studies, these results indicate extensive local repatterning of hominoid chromosomes in euchromatic regions through a duplication-driven mechanism of genome evolution...
  9. ncbi request reprint Evolutionary movement of centromeres in horse, donkey, and zebra
    Lucia Carbone
    Department of Genetics and Microbiology, University of Bari, Via Amendola 165 A, 70126 Bari, Italy
    Genomics 87:777-82. 2006
    ..These findings suggest that in some species the CR phenomenon could have played an important role in karyotype shaping, with potential consequences on population dynamics and speciation...
  10. pmc Recurrent sites for new centromere seeding
    Mario Ventura
    Sezione di Genetica Dipartimento di Anatomia Patologica e Genetica, University of Bari, 70126 Bari, Italy
    Genome Res 14:1696-703. 2004
    ..We propose that the formation of neocentromeres in humans and the emergence of new centromeres during the course of evolution share a common mechanism...
  11. ncbi request reprint Evolutionary history of chromosome 10 in primates
    Lucia Carbone
    Sezione di Genetica, DAPEG, Via Amendola 165 A 70126 Bari, Italy
    Chromosoma 111:267-72. 2002
    ..The SSC centromere, nevertheless, was located in a different chromosomal region, therefore suggesting that a centromeric repositioning event occurred in this species...