Sabah Kadri

Summary

Affiliation: Carnegie Mellon University
Country: USA

Publications

  1. pmc HHMMiR: efficient de novo prediction of microRNAs using hierarchical hidden Markov models
    Sabah Kadri
    Lane Center for Computational Biology, Carnegie Mellon University, Pittsburgh, PA 15213, USA
    BMC Bioinformatics 10:S35. 2009
  2. pmc RNA deep sequencing reveals differential microRNA expression during development of sea urchin and sea star
    Sabah Kadri
    Lane Center for Computational Biology, Carnegie Mellon University, Pittsburgh, Pennsylvania, USA
    PLoS ONE 6:e29217. 2011

Collaborators

Detail Information

Publications2

  1. pmc HHMMiR: efficient de novo prediction of microRNAs using hierarchical hidden Markov models
    Sabah Kadri
    Lane Center for Computational Biology, Carnegie Mellon University, Pittsburgh, PA 15213, USA
    BMC Bioinformatics 10:S35. 2009
    ..In spite of their biological significance, the identification of miRNA genes in newly sequenced organisms is still based, to a large degree, on extensive use of evolutionary conservation, which is not always available...
  2. pmc RNA deep sequencing reveals differential microRNA expression during development of sea urchin and sea star
    Sabah Kadri
    Lane Center for Computational Biology, Carnegie Mellon University, Pittsburgh, Pennsylvania, USA
    PLoS ONE 6:e29217. 2011
    ..The computational pipeline to analyze Illumina reads is available at http://www.benoslab.pitt.edu/services.html...