Research Topics
Genomes and Genes
| Y ZhangSummaryAffiliation: Boston University Country: USA Publications
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Detail Information
Publications
Nuclear translocation of the N-terminal prodomain of interleukin-16Y Zhang
Pulmonary Center, Boston University School of Medicine, Boston, Massachusetts 02118, USA
J Biol Chem 276:1299-303. 2001....
Processing and activation of pro-interleukin-16 by caspase-3Y Zhang
Pulmonary Center, Boston University School of Medicine, Boston, Massachusetts 02118, USA
J Biol Chem 273:1144-9. 1998..Pro-IL-16 is a substrate for caspase-3, and cleavage by this enzyme releases biologically active IL-16 from its inactive precursor...
Subchondral bone marrow lesions are highly associated with, and predict subchondral bone attrition longitudinally: the MOST studyF W Roemer
Quantitative Imaging Center QIC, Department of Radiology, Boston University Medical Center, Boston, MA 02118, USA
Osteoarthritis Cartilage 18:47-53. 2010..The aim of this study was to evaluate the cross-sectional and longitudinal association of BMLs with SBA in the same subregion of the knee...
Change in MRI-detected subchondral bone marrow lesions is associated with cartilage loss: the MOST Study. A longitudinal multicentre study of knee osteoarthritisF W Roemer
Department of Radiology, Boston University Medical Center, FGH Building, 3 Floor, 820 Harrison Ave, Boston, MA 02118, USA
Ann Rheum Dis 68:1461-5. 2009..Additionally, to examine the association of change in BMLs from baseline to 30-month follow-up with the risk of cartilage loss in the same subregion at follow-up...
A comparison of dedicated 1.0 T extremity MRI vs large-bore 1.5 T MRI for semiquantitative whole organ assessment of osteoarthritis: the MOST studyF W Roemer
Quantitative Imaging Center QIC, Department of Radiology, Boston University Medical Center, Boston, MA 02118, USA
Osteoarthritis Cartilage 18:168-74. 2010..The aim of this study was to compare semi-quantitative (SQ) scoring on a 1.0 T system using 1.5 T MRI as the standard of reference...
Change in cartilage morphometry: a sample of the progression cohort of the Osteoarthritis InitiativeD J Hunter
Division of Research, New England Baptist Hospital, 125 Parker Hill Ave, Boston, MA 02120, USA
Ann Rheum Dis 68:349-56. 2009..Our objective was to assess the rate of natural disease progression of cartilage morphometry measures from baseline to 1 year in knees with osteoarthritis (OA) from a subset of participants from the Osteoarthritis Initiative (OAI)...
Conservation of structure and function between human and murine IL-16J Keane
The Pulmonary Center, Boston University School of Medicine, MA 02118, USA
J Immunol 160:5945-54. 1998..The data suggest cross-species conservation of IL-16 receptor structures as well. Inhibitory peptides may be useful in disease states where the proinflammatory functions of IL-16 are detrimental to the host...
Knee alignment differences between Chinese and Caucasian subjects without osteoarthritisW F Harvey
Boston University Clinical Epidemiology Research and Training Unit, Boston, MA 02118, USA
Ann Rheum Dis 67:1524-8. 2008..We measured various knee alignment indices among Chinese and Caucasians and assessed whether these indices were different between the two racial groups...
Peripatellar synovitis: comparison between non-contrast-enhanced and contrast-enhanced MRI and association with pain. The MOST studyM D Crema
Department of Radiology, Quantitative Imaging Center, Boston University School of Medicine, Boston, MA, USA Department of Radiology, Hospital do Coração HCor, and Teleimagem, Sao Paulo, Brazil Electronic address
Osteoarthritis Cartilage 21:413-8. 2013....
Retinoblastoma protein modulates gankyrin-MDM2 in regulation of p53 stability and chemosensitivity in cancer cellsW Qiu
Graduate Program in Molecular Medicine, Department of Medicine, Boston University School of Medicine, Boston, MA, USA
Oncogene 27:4034-43. 2008..These results indicate that Rb antagonizes gankyrin to inhibit MDM2-mediate p53 ubiquitination in cancer cells and suggest that the status of both p53 and Rb is important for efficacy of cancer chemotherapy...
Cartilage loss occurs in the same subregions as subchondral bone attrition: a within-knee subregion-matched approach from the Multicenter Osteoarthritis StudyT Neogi
Boston University School of Medicine, 650 Albany Street, Clinical Epidemiology Unit, Suite X 200, Boston, MA 02118, USA
Arthritis Rheum 61:1539-44. 2009..We therefore evaluated whether SBA was associated with cartilage loss within the same subregion of the knee...
Comparison of the prevalence of knee osteoarthritis between the elderly Chinese population in Beijing and whites in the United States: The Beijing Osteoarthritis StudyY Zhang
Boston University School of Medicine, Massachusetts 02118, USA
Arthritis Rheum 44:2065-71. 2001..The prevalence in men was comparable. Possible explanations for these differences range from genetic differences to heavy physical activity among Chinese...
The relation of femoral notch stenosis to ACL tears in persons with knee osteoarthritisV Stein
Division of Research, New England Baptist Hospital, Boston, MA 02120, USA
Osteoarthritis Cartilage 18:192-9. 2010..The purpose of this study was to test if persons with knee osteoarthritis (OA) and ACL tears have smaller NWI independent of prior joint injury and osteophyte volume...
Bone mass and the risk of colon cancer among postmenopausal women: the Framingham studyY Zhang
Boston University Arthritis Center, Boston University School of Medicine, MA, USA
Am J Epidemiol 153:31-7. 2001..033). No association was found between bone mass and rectal cancer. The findings suggest that women with higher bone mass, perhaps reflecting greater cumulative estrogen exposure, have a decreased risk of colon cancer...
Bone mineral density and verbal memory impairment: Third National Health and Nutrition Examination SurveyY Zhang
Boston University Arthritis Center, Boston University School of Medicine, Boston, MA 02115, USA
Am J Epidemiol 154:795-802. 2001..001). These results suggest that bone mineral density in the elderly is associated with verbal memory impairment. The mechanisms underlying this relation are not understood, but cumulative exposure to estrogen may play a role...
Lineage-specific overexpression of the P2Y1 receptor induces platelet hyper-reactivity in transgenic miceB Hechler
Department of Biochemistry, Whitaker Cardiovascular Institute, Boston University School of Medicine, Boston, Massachusetts, USA
J Thromb Haemost 1:155-63. 2003....
Cell surface Trk receptors mediate NGF-induced survival while internalized receptors regulate NGF-induced differentiationY Zhang
Department of Neurobiology, Harvard Medical School, Boston, Massachusetts 02115, USA
J Neurosci 20:5671-8. 2000..Thus, interactions between Trk receptor tyrosine kinases and intracellular signaling molecules are dictated both by phosphotyrosine motifs within the receptors and by the intracellular location of phosphorylated receptors...
Reproducible and inexpensive probe preparation for oligonucleotide arraysY Zhang
Department of Radiation Oncology, Dana Farber Cancer Institute, Harvard Medical School, Boston, MA, USA
Nucleic Acids Res 29:E66-6. 2001..Validation of this protocol is demonstrated by hybridizing PCR products with oligonucleotide-coated microspheres and PCR amplified cDNA with Affymetrix Cancer GeneChip microarrays...
AIM-1 transgenic mice with a curly tail phenotype and its chromosome locationD Chinnappan
Department of Biochemistry, Boston University School of Medicine, Boston MA 02118, USA
Cytogenet Genome Res 98:231A. 2002
Premorbid knee osteoarthritis is not characterised by diffuse thinness: the Framingham Osteoarthritis StudyD J Hunter
Boston University School of Medicine, Boston, MA, USA
Ann Rheum Dis 67:1545-9. 2008....
Repression of AIM-1 kinase mRNA as part of a program of genes regulated by Mpl ligandY Zhang
Department of Biochemistry and Whitaker Cardiovascular Institute, Boston University School of Medicine, Boston, Massachusetts 02118, USA
Biochem Biophys Res Commun 282:844-9. 2001..These data point to the potential importance of the transcriptional regulation of the AIM-1 gene for promoting megakaryocyte polyploidization...
Longitudinal analysis of the relationship between serum insulin-like growth factor-I and radiographic knee osteoarthritisL Fraenkel
Arthritis Center, Boston University Medical Center, Massachusetts 02118, USA
Osteoarthritis Cartilage 6:362-7. 1998..To examine the relation between serum insulin-like growth factor I (IGF-I) levels and both incident and progressive radiographic knee osteoarthritis (OA) in the Framingham Osteoarthritis Study...
Identification of a novel substitution in the constant region of a gene coding for an amyloidogenic kappa1 light chainJ Wally
Section of Hematology and Oncology, Department of Medicine, Boston Medical Center and Boston University School of Medicine, Boston, MA 02118, USA
Biochim Biophys Acta 1454:49-56. 1999..Our findings indicate that further investigation is warranted into the contributions genetic polymorphisms and light chain constant regions may make to amyloidogenesis...
One-step, highly efficient site-directed mutagenesis by toxic protein selectionW Xu
Dana-Farber Cancer Institute, Boston, MA 02115, USA
Biotechniques 32:1266-8, 1270. 2002..Based on stringent selection through the toxic CcdB protein, mutagenesis efficiency of 90%-100% was reached even after one round of transformation...
The association of meniscal damage with joint effusion in persons without radiographic osteoarthritis: the Framingham and MOST osteoarthritis studiesF W Roemer
Quantitative Imaging Center QIC, Department of Radiology, Boston University Medical Center, Boston, MA 02118, USA
Osteoarthritis Cartilage 17:748-53. 2009..To assess the cross-sectional association between meniscal status and joint effusion on magnetic resonance imaging (MRI) in knees without radiographic osteoarthritis (OA)...
Lewis blood group phenotype as an independent risk factor for coronary heart disease (the NHLBI Family Heart Study)R C Ellison
Evans Department of Medicine, Boston University School of Medicine, Massachusetts 02118, USA
Am J Cardiol 83:345-8. 1999..We conclude that the Le(a-b-) phenotype is associated with an increased risk for CHD; its effect does not appear to act predominantly through conventional cardiovascular risk factors. At present, mechanisms of effect are unknown...
Phenotypic and functional characteristics of macrophage-like cells differentiated in pro-inflammatory cytokine-containing culturesF F Hou
Renal Division, Division of Immunology and Rheumatology, Department of Medicine, Brigham and Women s Hospital, Harvard Medical School, Boston, Massachusetts, USA
Immunol Cell Biol 78:205-13. 2000..Elevated levels of IL-1beta and TNF-alpha in the inflammatory tissues may therefore not only prolong the survival of recruited monocytes, but maintain them in an inflammatory state...
Psychological factors and their relation to osteoarthritis painB L Wise
University School of Medicine, Boston, MA, USA
Osteoarthritis Cartilage 18:883-7. 2010..We assessed associations between mental health and osteoarthritis (OA) pain...
Disruption of IRS-2 causes type 2 diabetes in miceD J Withers
Howard Hughes Medical Institute, Joslin Diabetes Center, Department of Medicine, Harvard Medical School, Boston, Massachusetts 02215, USA
Nature 391:900-4. 1998..Our results indicate that dysfunction of IRS-2 may contribute to the pathophysiology of human type 2 diabetes...
Elongation factor Ts of Chlamydia trachomatis: structure of the gene and properties of the proteinY Zhang
Maxwell Finland Laboratory for Infectious Diseases, Boston Medical Center, Boston University School of Medicine, Massachusetts 02118, USA
Arch Biochem Biophys 344:43-52. 1997..coli elongation factor Tu (EF-Tu). These data show that the second gene of the identified cluster is tsf. Unlike EF-Ts from any other species, its activity was comparable to that of E. coli EF-Ts in exchange reaction with E. coli EF-Tu...
Deregulated expression of c-myc in megakaryocytes of transgenic mice increases megakaryopoiesis and decreases polyploidizationA Thompson
Department of Biochemistry, Boston University School of Medicine, Boston, Massachusetts 02139, USA
J Biol Chem 271:22976-82. 1996..These transgenic mice represent a novel in vivo model for a Myc-induced myeloproliferative disorder which can be controlled...
Exploring the relation of alcohol consumption to risk of breast cancerR C Ellison
Section of Preventive Medicine and Epidemiology, Evans Department of Medicine, Boston University School of Medicine, Boston, MA 02118, USA
Am J Epidemiol 154:740-7. 2001..Cohort studies with less than 10 years of follow-up gave estimates 11% higher than cohort studies with longer follow-up periods. No meaningful difference was seen by menopausal status or type of beverage consumed...
Diuretic initiation and the acute risk of hip fractureS D Berry
Institute for Aging Research, Hebrew SeniorLife and Department of Medicine, Beth Israel Deaconess Medical Center and Harvard Medical School, Boston, MA, USA
Osteoporos Int 24:689-95. 2013..No statistical association was found following the initiation of a comparator medication: ACE inhibitors. Awareness of these short-term risks may reduce hip fractures...
Conservation of early odontogenic signaling pathways in AvesY Chen
Division of Genetics, Department of Medicine, Brigham and Women s Hospital and Harvard Medical School, Boston, MA 02115, USA
Proc Natl Acad Sci U S A 97:10044-9. 2000....
Human keratinocytes express EMMPRIN, an extracellular matrix metalloproteinase inducerR DeCastro
Department of Anatomy and Cellular Biology, Tufts University School of Medicine, Boston, Massachusetts, USA
J Invest Dermatol 106:1260-5. 1996..These results establish the presence of EMMPRIN in the normal epidermis and raise the possibility of its involvement in regulation of matrix remodeling at the epidermal-dermal interface...
Characterization of the mouse cyclin D3 gene: exon/intron organization and promoter activityZ Wang
Department of Biochemistry, Boston University School of Medicine, Boston, Massachusetts, 02128, USA
Genomics 35:156-63. 1996..The characterization of the mouse cyclin D3 gene and insight into its promoter region will allow further studies defining the molecular events regulating the expression of this cyclin in proliferating and quiescent cells...
Relation between dietary fiber consumption and fibrinogen and plasminogen activator inhibitor type 1: The National Heart, Lung, and Blood Institute Family Heart StudyL Djousse
Evans Department of Medicine, Boston University School of Medicine, 02118, USA
Am J Clin Nutr 68:568-75. 1998..39 for men and 0.36 for women). These data suggest that higher fiber intake is inversely associated with PAI-1, but not with fibrinogen concentration...
Differential patterns of cocaine-induced organ toxicity in murine heart versus liverJ F Wang
The Charles A. Dana Research Institute and Harvard-Thorndike Laboratory, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, Massachusetts 02215, USA
Exp Biol Med (Maywood) 226:52-60. 2001..The results suggest that the liver is more sensitive than the heart to cocaine toxicity, and induction of apoptosis or TNF-alpha elevation may be a common mechanism responsible for cocaines toxicity...
Nitric oxide-stimulated increase in extracellular adenosine accumulation in rat forebrain neurons in culture is associated with ATP hydrolysis and inhibition of adenosine kinase activityP A Rosenberg
Department of Neurology and Program in Neuroscience, Children s Hospital and Harvard Medical School, Boston, Massachusetts 02115, USA
J Neurosci 20:6294-301. 2000..Furthermore, nitric oxide-stimulated adenosine accumulation may be important in the regulation of behavioral state...
ARF promotes accumulation of retinoblastoma protein through inhibition of MDM2D L F Chang
Graduate Program in Molecular Medicine, Department of Medicine, Boston University School of Medicine, Boston, MA 02118, USA
Oncogene 26:4627-34. 2007..Thus, this study demonstrates that ARF plays a direct role in regulation of Rb and suggests that inactivation of ARF may lead to defects in both p53 and Rb pathways in human cancer development...
An intermediate conductance K+ channel in the cell membrane of mouse intestinal smooth muscleF Vogalis
Brockton West Roxbury VA Medical Center and Harvard Medical School, 1400 VFW Parkway, Boston, MA 02132, USA
Biochim Biophys Acta 1371:309-16. 1998..Our results suggest that IK channels contribute significantly to the Ca2+-dependent K+ conductance in visceral smooth muscle...
Common and contrasting genomic profiles among the major human lung cancer subtypesG Tonon
Department of Medical Oncology, Dana-Farber Cancer Institute, Harvard Medical School, Boston, Massachusetts 02115, USA
Cold Spring Harb Symp Quant Biol 70:11-24. 2005..These findings suggest that the AC and SCC subtypes may arise from a common cell of origin and they are driven to their distinct phenotypic end points by altered expression of a limited number of key genes such as p63...
The association between patellar alignment and patellofemoral joint osteoarthritis features--an MRI studyL Kalichman
Boston University Clinical Epidemiology Research and Training Unit, 715 Albany St, Boston, MA 02118, USA
Rheumatology (Oxford) 46:1303-8. 2007..The aim of our study was to evaluate the association between patellar alignment (using standard MRI images of extended knees) and MRI indices of patellofemoral (PF) osteoarthritis (OA) features...
The related adhesion focal tyrosine kinase differentially phosphorylates p130Cas and the Cas-like protein, p105HEF1A Astier
Department of Medicine, Harvard Medical School, Boston, Massachusetts 02115, USA
J Biol Chem 272:19719-24. 1997..These data suggest that RAFTK itself is sufficient for HEF1 phosphorylation, whereas a cooperation between RAFTK and Src kinases is required for the complete phosphorylation of p130(Cas)...
Identification of an overlapping binding domain on Cdc20 for Mad2 and anaphase-promoting complex: model for spindle checkpoint regulationY Zhang
Department of Oncology, DNAX Research Institute, Palo Alto, California 94304 1104, USA
Mol Cell Biol 21:5190-9. 2001..Our experiments demonstrate that disruption of the Mad2-Cdc20 interaction perturbs the mitotic checkpoint, leading to premature activation of the APC, sensitizing the cells to the cytotoxic effects of microtubule-inhibiting drugs...
Secretory expression of recombinant proteins in an attenuated Vibrio anguillarum strain for potential use in vaccinesM Shao
State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, Shanghai, China
J Fish Dis 28:723-8. 2005..In the case of GFP-HlyAs, nearly 70% of the total fusion protein was efficiently secreted into culture supernatant, and in the case of AngE-HlyAs, the secretion efficiency was determined to be about 300 microg L(-1) by Western blotting...
Molecular cloning and characterization of chemokine-like factor 1 (CKLF1), a novel human cytokine with unique structure and potential chemotactic activityW Han
Laboratory of Medical Immunology, School of Basic Medical Science, Peking University, 38 Xueyuan Road, Beijing, 100083, China
Biochem J 357:127-35. 2001..These results suggest that CKLF1 might have important roles in inflammation and in the regeneration of skeletal muscle...
Human skeletal muscle insulin receptor substrate-1. Characterization of the cDNA, gene, and chromosomal localizationE Araki
Department of Medicine, Brigham and Women s Hospital, Boston, Massachusetts
Diabetes 42:1041-54. 1993..Thus, IRS-1 is widely expressed and highly conserved across species and tissues.(ABSTRACT TRUNCATED AT 250 WORDS)..
Methylation of histone H4 at arginine 3 facilitating transcriptional activation by nuclear hormone receptorH Wang
Department of Biochemistry and Biophysics, Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599 7295, USA
Science 293:853-7. 2001..Our finding reveals Arg 3 of H4 as a novel methylation site by PRMT1 and indicates that Arg 3 methylation plays an important role in transcriptional regulation...
[Expression of pyruvate oxidase gene sopox from Streptococcus sanguis in E. coli]B Hou
Department of Periodontology, School of Stomatology, WCUMS, Chengdu 610041, China
Hua Xi Yi Ke Da Xue Xue Bao 32:15-7. 2001..CONCLUSION: Sopox was successfully cloned into pBV220 and expressed in E. coli JM105...
Cloning and expression of a single-chain catalytic antibody that acts as a glutathione peroxidase mimic with high catalytic efficiencyX Ren
Key Laboratory of Supramolecular Structure and Spectroscopy, Jilin University, Changchun 130023, China
Biochem J 359:369-74. 2001....
A novel Bacillus thuringiensis strain LLB6, isolated from bryophytes, and its new cry2Ac-type geneL L Zhang
Key Laboratory of Biopesticide and Chemical Biology, Ministry of Education, Fujian Agriculture and Forestry University, Fuzhou, Fujian, P R China
Lett Appl Microbiol 44:301-7. 2007..To isolate and characterize the novel Bacillus thuringiensis strains from bryophytes collected from Wuyi Mountain, Fujian Province of China, and identify new B. thuringiensis strains and toxins active against mosquitoes...
Combination therapy for treating breast cancer using antiestrogen, ERA-923, and the mammalian target of rapamycin inhibitor, temsirolimusT M Sadler
Department of Oncology, Wyeth Research, 401 North Middle Town Road, Pearl River, New York, New York 10965, USA
Endocr Relat Cancer 13:863-73. 2006..Results demonstrated for the first time that the combination of temsirolimus and a pure antiestrogen has excellent anticancer activity in preclinical models and, therefore, may have clinical use in treating hormone-dependent tumors...
Urogenital distribution of a mouse membrane-associated prostaglandin E(2) synthaseY Guan
Division of Nephrology, Department of Medicine, Vanderbilt University Medical Center, Nashville, Tennessee 37212, USA
Am J Physiol Renal Physiol 281:F1173-7. 2001..In conclusion, mPGES is constitutively expressed along the urogenital tract, where it may have important roles in normal physiology and disease...
Urinary pentosidine does not predict cartilage loss among subjects with symptomatic knee OA: the BOKS StudyD J Hunter
Boston University Clinical Epidemiology Research and Training Unit, Boston, MA 02118, USA
Osteoarthritis Cartilage 15:93-7. 2007..We used data from a longitudinal observation study to determine if urinary pentosidine could serve as a marker to predict cartilage loss...
[Introduction of Vitreoscilla hemoglobin gene in a recombinant E. coli for PHB production]H Yu
Department of Chemical Engineering, Institute of Biochemical Engineering, Tsinghua University, Beijing 100084, China
Wei Sheng Wu Xue Bao 41:548-52. 2001..The higher amounts of VHb could be got correspond to the lower level of DO. Because of the introduction of vgb, cell growth and PHB accumulation of VG1 (pTU14) were all strongly promoted during the process of batch culture...
Trapeziometacarpal subluxation predisposes to incident trapeziometacarpal osteoarthritis (OA): the Framingham StudyD J Hunter
Clinical Epidemiology Research and Training Unit, Boston University School of Medicine, and Brigham and Women s Hospital, Boston, MA 02118, USA
Osteoarthritis Cartilage 13:953-7. 2005..However, as yet there have been no longitudinal evaluations to determine if this hypothesis is true. We examined the relation of radial subluxation to the risk of radiographic OA at trapeziometacarpal joint...
Symmetry and clustering of symptomatic hand osteoarthritis in elderly men and women: the Framingham StudyJ Niu
Clinical Epidemiology Research and Training Unit, Boston University School of Medicine, MA 02118, USA
Rheumatology (Oxford) 42:343-8. 2003..The goal of this study was to study patterns of joint involvement in symptomatic hand OA among elderly Caucasian men and women...
siRNA targeting the leader sequence of SARS-CoV inhibits virus replicationT Li
Department of Biological Sciences and Biotechnology, Institute of Biomedicine, Tsinghua University, Beijing, China
Gene Ther 12:751-61. 2005..This report provides evidence that targeting Leader sequence using siRNA could be a powerful tool in inhibiting SARS-CoV replication...
FlaC, a protein of Campylobacter jejuni TGH9011 (ATCC43431) secreted through the flagellar apparatus, binds epithelial cells and influences cell invasionY C Song
Department of Medical Genetics and Microbiology, Medical Science Building, 1 King's College Circle, University of Toronto, Toronto, Ontario, Canada M5S 1A8
Mol Microbiol 53:541-53. 2004..Invasion of HEp-2 cells by flaC null mutants was reduced to a level of 14% compared with wild type, suggesting that FlaC plays an important role in cell invasion...
Identification of the motif in versican G3 domain that plays a dominant-negative effect on astrocytoma cell proliferation through inhibiting versican secretion and bindingY Wu
Sunnybrook and Women's College Health Sciences Centre and Department of Laboratory Medicine and Pathobiology, University of Toronto, Toronto, Ontario M4N 3M5, Canada
J Biol Chem 276:14178-86. 2001..The effect seems to depend on the expression efficiency of G3DeltaEGF, and it occurred via the carbohydrate recognition domain...
Location of the nupC gene on the physical map of Escherichia coli K-12Y Zhang
Institute of Cell and Molecular Biology, University of Edinburgh, Scotland
J Bacteriol 174:5758-9. 1992
Expression and functional characterization of Escherichia coli NusA and lambda Q as glutathione S-transferase fusion proteinsY Zhang
Department of Botany Microbiology, University of Oklahoma, Norman 73019, USA
Protein Expr Purif 6:625-31. 1995....
Characterization of the Bacillus subtilis thiC operon involved in thiamine biosynthesisY Zhang
Department of Chemistry, Cornell University, Ithaca, New York 14853, USA
J Bacteriol 179:3030-5. 1997..Transcription of the thiC operon is not regulated by thiamine or 2-methyl-4-amino-5-hydroxymethylpyrimidine and is only slightly repressed by 4-methyl-5-(beta-hydroxyethyl)thiazole...
Cloning, expression, and regulation of rabbit cyclooxygenase-2 in renal medullary interstitial cellsY Guan
Division of Nephrology, Veterans Affairs Medical Center, Nashville, Tennessee, USA
Am J Physiol 273:F18-26. 1997..Phorbol ester also upregulated immunoreactive COX2. Constitutive COX2 in these tissues has important implications for side effects of COX2-selective inhibitors...
Immunodominant major outer membrane proteins of Ehrlichia chaffeensis are encoded by a polymorphic multigene familyN Ohashi
Department of Veterinary Biosciences, College of Veterinary Medicine, The Ohio State University, Columbus 43210 1093, USA
Infect Immun 66:132-9. 1998..chaffeensis. These findings suggest that the 30-kDa-range proteins of E. chaffeensis represent a family of antigenically related homologous proteins encoded by a single gene family...
Mutational analysis of the roles of residues in Escherichia coli elongation factor Ts in the interaction with elongation factor TuY Zhang
Department of Chemistry, University of North Carolina, Chapel Hill, North Carolina 27599 3290, USA
J Biol Chem 273:4556-62. 1998..Mutations prepared in EF-Tu indicate that His-19 and Gln-114 but not Glu-348 in EF-Tu are moderately important for its interaction with EF-Ts...
The catalase-peroxidase gene and isoniazid resistance of Mycobacterium tuberculosisY Zhang
MRC Tuberculosis and Related Infections Unit, Royal Postgraduate Medical School, Hammersmith Hospital, London, UK
Nature 358:591-3. 1992..Deletion of katG from the chromosome was associated with INH resistance in two patient isolates of M. tuberculosis...
Transcriptional analysis of essential genes of the Escherichia coli fatty acid biosynthesis gene cluster by functional replacement with the analogous Salmonella typhimurium gene clusterY Zhang
Department of Microbiology, University of Illinois, Urbana 61801, USA
J Bacteriol 180:3295-303. 1998..Insertion of the omega-Cm cassette between fabH and fabD caused greatly decreased transcription of the fabD and fabG genes and slower cellular growth, indicating that fabD has only a weak promoter(s)...
The capsule biosynthetic locus of Pasteurella multocida A:1J Y Chung
Department of Microbiology, Monash University, Clayton, Vic, Australia
FEMS Microbiol Lett 166:289-96. 1998..Region 3 comprises two ORFs whose postulated products show similarity to proteins that are involved in the phospholipid substitution of the polysaccharide capsule...
Characterization of the katG gene encoding a catalase-peroxidase required for the isoniazid susceptibility of Mycobacterium tuberculosisB Heym
Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, Paris, France
J Bacteriol 175:4255-9. 1993..tuberculosis, M. smegmatis, and Escherichia coli was demonstrated by Western blotting (immunoblotting). Homologous genes were detected in other mycobacteria, even those which are naturally insensitive to isoniazid...
Cloning of the nupC gene of Escherichia coli encoding a nucleoside transport system, and identification of an adjacent insertion element, IS 186J E Craig
Institute of Cell and Molecular Biology, University of Edinburgh, UK
Mol Microbiol 11:1159-68. 1994..This arrangement is shown to reflect the previously established gene order on the E. coli chromosome...
Genetic analysis of superoxide dismutase, the 23 kilodalton antigen of Mycobacterium tuberculosisY Zhang
MRC Tuberculosis and Related Infections Unit, RPMS, Hammersmith Hospital, London, UK
Mol Microbiol 5:381-91. 1991..tuberculosis, but the structural gene is not preceded by a signal peptide sequence. Insertion of the M. tuberculosis SOD gene into a novel shuttle vector demonstrated the mycobacteria but is ineffective in Escherichia coli...
cDNA sequence of a Drosophila melanogaster gene, Dfur1, encoding a protein structurally related to the subtilisin-like proprotein processing enzyme furinA J Roebroek
Molecular Oncology Section, University of Leuven, Belgium
FEBS Lett 289:133-7. 1991..Furthermore, unlike human furin, Dfurin1 possessed an extended amino-terminal region in which a potential transmembrane anchor was present...
NusA changes the conformation of Escherichia coli RNA polymerase at the binding site for the 3' end of the nascent RNAY Zhang
Department of Botany Microbiology, University of Oklahoma, Norman 73019
J Bacteriol 176:1787-9. 1994..A change in the binding site for the 3' end of the RNA occurred, and NusA increased interactions of the RNA with the beta subunit of the polymerase. NusA was not contacted by the 3' end of the RNA...
Localization of human immunodeficiency virus Rev in transfected and virus-infected cellsL Luznik
Department of Medicine, UCSD School of Medicine, La Jolla, California 92093 0665, USA
AIDS Res Hum Retroviruses 11:795-804. 1995..Our observations are consistent with the proposed dual role of Rev in mRNA transport and splicing...
Subunits coupling H+ transport and ATP synthesis in the Escherichia coli ATP synthase. Cys-Cys cross-linking of F1 subunit epsilon to the polar loop of F0 subunit cY Zhang
Department of Biomolecular Chemistry, University of Wisconsin Medical School, Madison 53706, USA
J Biol Chem 270:24609-14. 1995....
The human glioma pathogenesis-related protein is structurally related to plant pathogenesis-related proteins and its gene is expressed specifically in brain tumorsE V Murphy
Department of Neurologic Surgery, University of California, San Francisco 94143, USA
Gene 159:131-5. 1995..We speculate that there may be functional similarities between the human and plant proteins as well...
Effect of an ntrBC mutation on the posttranslational regulation of nitrogenase activity in Rhodospirillum rubrumY Zhang
Department of Biochemistry, University of Wisconsin Madison 53706, USA
J Bacteriol 177:5322-6. 1995..rubrum. The expression of glutamine synthetase, as well as its posttranslational regulation, was also altered in this ntrBC mutant...
Strain variation in the katG region of Mycobacterium tuberculosisY Zhang
MRC Tuberculosis and Related Infections Unit, Hammersmith Hospital, London, UK
Mol Microbiol 14:301-8. 1994..These results indicate that the katG region of the M. tuberculosis genome is highly variable and unstable. The presence of repetitive sequences may contribute to instability in this region of the genome...
Identification and cloning of human mitochondrial translational release factor 1 and the ribosome recycling factorY Zhang
Department of Chemistry, Campus Box 3290, University of North Carolina, Chapel Hill, NC 27599 3290, USA
Biochim Biophys Acta 1443:245-50. 1998..The complete cDNA for the human mitochondrial ribosome recycling factor has been assembled using EST clones. This factor has been expressed in Escherichia coli and purified as a His-tagged protein...
Protein translation and folding are coupled by an endoplasmic-reticulum-resident kinaseH P Harding
Skirball Institute of Biomolecular Medicine, Department of Medicine, NYU School of Medicine, New York 10016, USA
Nature 397:271-4. 1999..These properties implicate PERK in a signalling pathway that attenuates protein translation in response to ER stress...
Caspase-mediated cleavage of p21Waf1/Cip1 converts cancer cells from growth arrest to undergoing apoptosisY Zhang
Institute of Molecular and Cellular Biosciences, University of Tokyo, Japan
Oncogene 18:1131-8. 1999..Thus, caspase-3-mediated cleavage and inactivation of p21 protein may convert cancer cells from growth arrest to undergoing apoptosis, leading to the acceleration of chemotherapy-induced apoptotic process in cancer cells...
Evidence that dim1 associates with proteins involved in pre-mRNA splicing, and delineation of residues essential for dim1 interactions with hnRNP F and Npw38/PQBP-1Y Zhang
Division of Basic Science, Fox Chase Cancer Center, Philadelphia, PA 19111, USA
Gene 257:33-43. 2000..These results parallel the arrest phenotypes associated with global disruption of zygotic gene expression, suggesting that Dim1 proteins maintain an essential function in gene expression in higher eukaryotes...
Parkin functions as an E2-dependent ubiquitin- protein ligase and promotes the degradation of the synaptic vesicle-associated protein, CDCrel-1Y Zhang
Departments of Neurology, Neuroscience, and Physiology, Johns Hopkins University School of Medicine, Baltimore, MD 21287 0005, USA
Proc Natl Acad Sci U S A 97:13354-9. 2000..The loss of Parkin's ubiquitin-protein ligase function in familial-linked mutations suggests that this may be the cause of familial autosomal recessive Parkinson's disease...
The MinE ring required for proper placement of the division site is a mobile structure that changes its cellular location during the Escherichia coli division cycleX Fu
Department of Microbiology, University of Connecticut Health Center, Farmington, CT 06030, USA
Proc Natl Acad Sci U S A 98:980-5. 2001....
Chromosomal localization, expression pattern, and promoter analysis of the mouse gene encoding adipocyte-specific secretory protein Acrp30K Das
Department of Cell Biology, Albert Einstein College of Medicine, 1300 Morris Park Avenue, Bronx, New York, 10461, USA
Biochem Biophys Res Commun 280:1120-9. 2001..Finally, we have characterized the mouse Acrp30 promoter in tissue culture cells. We propose that Acrp30 promoter has the potential to drive strong adipocyte specific heterologous gene expression in transgenic mice...
Caenorhabditis elegans auxilin: a J-domain protein essential for clathrin-mediated endocytosis in vivoT Greener
Laboratory of Cell Biology, NHLBI, NIH, Bethesda, MD 20892 0301, USA
Nat Cell Biol 3:215-9. 2001..We conclude that auxilin is required for in vivo clathrin-mediated endocytosis and development in C. elegans...
Constitutive alpha-secretase cleavage of the beta-amyloid precursor protein in the furin-deficient LoVo cell line: involvement of the pro-hormone convertase 7 and the disintegrin metalloprotease ADAM10E Lopez-Perez
IPMC du CNRS, UMR6097, Valbonne, France
J Neurochem 76:1532-9. 2001..Transfection analysis allowed us to further establish that the pro-hormone convertase 7 and ADAM10 but not ADAM17 (TACE, tumour necrosis factor alpha-converting enzyme) likely contribute to constitutive sAPPalpha secretion by LoVo cells...
The carcinoembryonic antigen (CEA) gene family in non-human primatesG Q Zhou
Department of Immunology, , SE-901 85, , Sweden
Gene 264:105-12. 2001..Presence of GPI-linked CEA subgroup members in African green monkey was suggested by sequencing. Both monkey species would thus seem suitable for functional studies of selected CEA subgroup members...
A MAGE-3 peptide recognized on HLA-B35 and HLA-A1 by cytolytic T lymphocytesE S Schultz
Ludwig Institute for Cancer Research, Brussels, Belgium
Tissue Antigens 57:103-9. 2001..These results infer that the current clinical use of peptide EVDPIGHLY can now be extended to HLA-B*3501 patients...
The CUL1 C-terminal sequence and ROC1 are required for efficient nuclear accumulation, NEDD8 modification, and ubiquitin ligase activity of CUL1M Furukawa
Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina 27599 7295, USA
Mol Cell Biol 20:8185-97. 2000..This pathway may be commonly utilized for the assembly of other cullin ligases...
Characterization of a human 20alpha-hydroxysteroid dehydrogenaseY Zhang
Oncology and Molecular Endocrinology Research Center, CHUQ PCHUL and Laval University, Quebec, Quebec G1V 4G2, Canada
J Mol Endocrinol 25:221-8. 2000..The present study clearly indicates that the genuine human 20alpha-HSD belongs to the aldoketo reductase family, like the 20alpha-HSDs from other species...
Axin forms a complex with MEKK1 and activates c-Jun NH(2)-terminal kinase/stress-activated protein kinase through domains distinct from Wnt signalingY Zhang
Regulatory Biology Laboratory, Institute of Molecular and Cell Biology, National University of Singapore, 30 Medical Drive, Singapore 117609, Republic of Singapore
J Biol Chem 274:35247-54. 1999..Our results suggest that Axin, in addition to its function in the Wnt pathway, may play a dual role in cells through its activation of JNK/stress-activated protein kinase signaling cascade...
Membrane redistribution of the Escherichia coli MinD protein induced by MinES L Rowland
Department of Microbiology, University of Connecticut Health Center, Farmington, Connecticut 06032, USA
J Bacteriol 182:613-9. 2000..Studies with the isolated N-terminal and C-terminal MinE domains indicated different roles for the two MinE domains in the redistribution of membrane-associated MinD...
Mutagenesis and functional characterization of the glnB, glnA, and nifA genes from the photosynthetic bacterium Rhodospirillum rubrumY Zhang
Departments of Biochemistry, University of Wisconsin Madison, Madison, Wisconsin 53706, USA
J Bacteriol 182:983-92. 2000....
The human RAD18 gene product interacts with HHR6A and HHR6BH Xin
306 Health Sciences Research Building, Graduate Center for Toxicology, University of Kentucky, Lexington, KY 40536, USA
Nucleic Acids Res 28:2847-54. 2000..Consistent with its role as a fundamental lesion bypass protein, the RAD18 gene is ubiquitously expressed in various human tissues...
Regulation of expression of phospholipase D1 and D2 by PEA-15, a novel protein that interacts with themY Zhang
Department of Pharmacology and the Institute for Cell and Developmental Biology, SUNY at Stony Brook, Stony Brook, New York 11794 8651, USA
J Biol Chem 275:35224-32. 2000..These results suggest that PEA-15 may stabilize PLD or act as a PLD chaperone. The common involvement of PEA-15 and PLD in apoptosis, ERK activation, and glucose transport additionally suggests functional significance...
Phosphatidylinositol 4-phosphate 5-kinase Its3 and calcineurin Ppb1 coordinately regulate cytokinesis in fission yeastY Zhang
Department of Pharmacology, Kobe University School of Medicine, Kobe 650 0017, Japan
J Biol Chem 275:35600-6. 2000..These data suggest that fission yeast PI(4)P5K Its3 functions coordinately with calcineurin and plays a key role in cytokinesis, and that the plasma membrane localization of Its3 is the crucial event in cytokinesis...
Biochemical and biophysical characterization of OmpG: A monomeric porinS Conlan
Department of Medical Biochemistry and Genetics, The Texas A and M University System Health Science Center, College Station, Texas 77843 1114, USA
Biochemistry 39:11845-54. 2000..The availability of milligram amounts of a monomeric porin will be useful both for basic studies of porin function and for membrane protein engineering...
Multiple actin-related proteins of Saccharomyces cerevisiae are present in the nucleusM Harata
Laboratory of Molecular Biology, Department of Molecular and Cell Biology, Division of Life Science, Graduate School of Agricultural Science, Tohoku University, Aoba ku, Sendai 981 8555, Japan
J Biochem 128:665-71. 2000....
