Jennifer Beane

Summary

Affiliation: Boston University
Country: USA

Publications

  1. ncbi Characterizing the impact of smoking and lung cancer on the airway transcriptome using RNA-Seq
    Jennifer Beane
    The Pulmonary Center, Department of Medicine, Boston University Medical Center, Boston University, Massachusetts, USA
    Cancer Prev Res (Phila) 4:803-17. 2011
  2. ncbi Clinical impact of high-throughput gene expression studies in lung cancer
    Jennifer Beane
    Bioinformatics Program, Boston University School of Engineering, Boston, Massachusetts, USA
    J Thorac Oncol 4:109-18. 2009
  3. ncbi Reversible and permanent effects of tobacco smoke exposure on airway epithelial gene expression
    Jennifer Beane
    Bioinformatics Program, Boston University, Cummington Street, Boston, MA 02215, USA
    Genome Biol 8:R201. 2007
  4. ncbi The SERPINE2 gene is associated with chronic obstructive pulmonary disease
    Dawn DeMeo
    Channing Laboratory, Harvard Medical School, 181 Longwood Avenue, Boston, MA 02115, USA
    Proc Am Thorac Soc 3:502. 2006
  5. ncbi SIRT1 pathway dysregulation in the smoke-exposed airway epithelium and lung tumor tissue
    Jennifer Beane
    Section of Computational Biomedicine, Department of Medicine, Boston University Medical Center Bioinformatics Program, Boston University, Boston, Massachusetts, USA
    Cancer Res 72:5702-11. 2012
  6. ncbi Gene expression profiling of human lung tissue from smokers with severe emphysema
    Avrum Spira
    The Pulmonary Center and Department of Medicine, Boston University School of Medicine, 715 Albany Street, R304, Boston, MA 02118, USA
    Am J Respir Cell Mol Biol 31:601-10. 2004
  7. ncbi SIEGE: Smoking Induced Epithelial Gene Expression Database
    Vishal Shah
    Bioinformatics Program, College of Engineering, Boston University, 44 Cummington Street, Boston, MA 02215, USA
    Nucleic Acids Res 33:D573-9. 2005
  8. ncbi Impact of cigarette smoke on the normal airway transcriptome
    Avrum Spira
    Pulmonary Center, Boston University School of Medicine, Boston, University, Boston, MA 02118-2526, USA
    Chest 125:115S. 2004
  9. ncbi A prediction model for lung cancer diagnosis that integrates genomic and clinical features
    Jennifer Beane
    The Pulmonary Center, Boston University Medical Center, Boston, MA 02118, USA
    Cancer Prev Res (Phila) 1:56-64. 2008
  10. ncbi Noninvasive method for obtaining RNA from buccal mucosa epithelial cells for gene expression profiling
    Avrum Spira
    Pulmonary Center, Boston University Medical Center, 715 Albany Street, Room 304, Boston, MA 02118, USA
    Biotechniques 36:484-7. 2004

Detail Information

Publications13

  1. ncbi Characterizing the impact of smoking and lung cancer on the airway transcriptome using RNA-Seq
    Jennifer Beane
    The Pulmonary Center, Department of Medicine, Boston University Medical Center, Boston University, Massachusetts, USA
    Cancer Prev Res (Phila) 4:803-17. 2011
    ....
  2. ncbi Clinical impact of high-throughput gene expression studies in lung cancer
    Jennifer Beane
    Bioinformatics Program, Boston University School of Engineering, Boston, Massachusetts, USA
    J Thorac Oncol 4:109-18. 2009
    ....
  3. ncbi Reversible and permanent effects of tobacco smoke exposure on airway epithelial gene expression
    Jennifer Beane
    Bioinformatics Program, Boston University, Cummington Street, Boston, MA 02215, USA
    Genome Biol 8:R201. 2007
    ..The identification of irreversible effects of tobacco smoke on airway gene expression may provide insights into the causes of this elevated risk...
  4. ncbi The SERPINE2 gene is associated with chronic obstructive pulmonary disease
    Dawn DeMeo
    Channing Laboratory, Harvard Medical School, 181 Longwood Avenue, Boston, MA 02115, USA
    Proc Am Thorac Soc 3:502. 2006
  5. ncbi SIRT1 pathway dysregulation in the smoke-exposed airway epithelium and lung tumor tissue
    Jennifer Beane
    Section of Computational Biomedicine, Department of Medicine, Boston University Medical Center Bioinformatics Program, Boston University, Boston, Massachusetts, USA
    Cancer Res 72:5702-11. 2012
    ....
  6. ncbi Gene expression profiling of human lung tissue from smokers with severe emphysema
    Avrum Spira
    The Pulmonary Center and Department of Medicine, Boston University School of Medicine, 715 Albany Street, R304, Boston, MA 02118, USA
    Am J Respir Cell Mol Biol 31:601-10. 2004
    ....
  7. ncbi SIEGE: Smoking Induced Epithelial Gene Expression Database
    Vishal Shah
    Bioinformatics Program, College of Engineering, Boston University, 44 Cummington Street, Boston, MA 02215, USA
    Nucleic Acids Res 33:D573-9. 2005
    ..Query results are embedded with graphical capabilities as well as with links to other databases containing valuable gene resources, including Entrez Gene, GO, Biocarta, GeneCards, dbSNP and the NCBI Map Viewer...
  8. ncbi Impact of cigarette smoke on the normal airway transcriptome
    Avrum Spira
    Pulmonary Center, Boston University School of Medicine, Boston, University, Boston, MA 02118-2526, USA
    Chest 125:115S. 2004
  9. ncbi A prediction model for lung cancer diagnosis that integrates genomic and clinical features
    Jennifer Beane
    The Pulmonary Center, Boston University Medical Center, Boston, MA 02118, USA
    Cancer Prev Res (Phila) 1:56-64. 2008
    ..These findings suggest that use of the clinicogenomic model may expedite more invasive testing and definitive therapy for smokers with lung cancer and reduce invasive diagnostic procedures for individuals without lung cancer...
  10. ncbi Noninvasive method for obtaining RNA from buccal mucosa epithelial cells for gene expression profiling
    Avrum Spira
    Pulmonary Center, Boston University Medical Center, 715 Albany Street, Room 304, Boston, MA 02118, USA
    Biotechniques 36:484-7. 2004
  11. ncbi Effects of cigarette smoke on the human airway epithelial cell transcriptome
    Avrum Spira
    Pulmonary Center and Department of Medicine, Boston University School of Medicine, 715 Albany Street, MA 02118, USA
    Proc Natl Acad Sci U S A 101:10143-8. 2004
    ....
  12. ncbi The SERPINE2 gene is associated with chronic obstructive pulmonary disease
    Dawn L DeMeo
    Channing Laboratory, Department of Medicine, Brigham and Women s Hospital, Boston, MA 02115, USA
    Am J Hum Genet 78:253-64. 2006
    ....
  13. ncbi Characterization of the mid-foregut transcriptome identifies genes regulated during lung bud induction
    Guetchyn Millien
    Department of Medicine, Boston University School of Medicine, Evans Biomedical Research Center, Boston, MA 02118, USA
    Gene Expr Patterns 8:124-39. 2008
    ..This characterization of the mid-foregut transcriptome provides new insights into molecular events leading to lung organogenesis...