Kerry O'Donnell

Summary

Affiliation: Agricultural Research Service
Country: USA

Publications

  1. pmc Cyber infrastructure for Fusarium: three integrated platforms supporting strain identification, phylogenetics, comparative genomics and knowledge sharing
    Bongsoo Park
    Department of Plant Pathology, Integrative Biosciences Graduate Program in Bioinformatics and Genomics, The Pennsylvania State University, University Park, PA 16802, USA
    Nucleic Acids Res 39:D640-6. 2011
  2. doi request reprint Phylogenetic analyses of RPB1 and RPB2 support a middle Cretaceous origin for a clade comprising all agriculturally and medically important fusaria
    Kerry O'Donnell
    Bacterial Foodborne Pathogens and Mycology Research Unit, National Center for Agricultural Utilization Research, US Department of Agriculture, Agricultural Research Service, 1815 North University Street, Peoria, IL 61604, USA
    Fungal Genet Biol 52:20-31. 2013
  3. doi request reprint Phylogenetic diversity of insecticolous fusaria inferred from multilocus DNA sequence data and their molecular identification via FUSARIUM-ID and Fusarium MLST
    Kerry O'Donnell
    National Center for Agricultural Utilization Research, U S Department of Agriculture, Peoria, IL 61604 3999, USA
    Mycologia 104:427-45. 2012
  4. pmc Evidence implicating Thamnostylum lucknowense as an etiological agent of rhino-orbital mucormycosis
    Immaculata Xess
    Department of Microbiology, All India Institute of Medical Sciences, New Delhi, India
    J Clin Microbiol 50:1491-4. 2012
  5. doi request reprint Phylogeny and historical biogeography of true morels (Morchella) reveals an early Cretaceous origin and high continental endemism and provincialism in the Holarctic
    Kerry O'Donnell
    Bacterial Foodborne Pathogens and Mycology Research Unit, National Center for Agricultural Utilization Research, US Department of Agriculture, Agricultural Research Service, 1815 North University Street, Peoria, IL 61604, USA
    Fungal Genet Biol 48:252-65. 2011
  6. doi request reprint Soybean sudden death syndrome species diversity within north and South america revealed by multilocus genotyping
    Kerry O'Donnell
    Microbial Genomics Research Unit, National Center for Agricultural Utilization Research, US Department of Agriculture, Agriculture Research Service, Peoria, IL 61604, USA
    Phytopathology 100:58-71. 2010
  7. pmc Novel multilocus sequence typing scheme reveals high genetic diversity of human pathogenic members of the Fusarium incarnatum-F. equiseti and F. chlamydosporum species complexes within the United States
    Kerry O'Donnell
    Microbial Genomics Research Unit, National Center for Agricultural Utilization Research, Agricultural Research Service, United States Department of Agriculture, Peoria, Illinois 61604 3999, USA
    J Clin Microbiol 47:3851-61. 2009
  8. ncbi request reprint A two-locus DNA sequence database for typing plant and human pathogens within the Fusarium oxysporum species complex
    Kerry O'Donnell
    Microbial Genomics Research Unit, Agricultural Research Service, US Department of Agriculture, Peoria, IL 61604, USA
    Fungal Genet Biol 46:936-48. 2009
  9. doi request reprint Multilocus genotyping and molecular phylogenetics resolve a novel head blight pathogen within the Fusarium graminearum species complex from Ethiopia
    Kerry O'Donnell
    Microbial Genomics Research Unit, National Center for Agricultural Utilization Research, U S Department of Agriculture, Agricultural Research Service, 1815 N University St, Peoria, IL 61604, USA
    Fungal Genet Biol 45:1514-22. 2008
  10. pmc Molecular phylogenetic diversity, multilocus haplotype nomenclature, and in vitro antifungal resistance within the Fusarium solani species complex
    Kerry O'Donnell
    Microbial Genomics and Bioprocessing Research Unit, National Center for Agricultural Utilization Research, Agricultural Research Service, U S Department of Agriculture, 1815 North University Street, Peoria, IL 61604 3999, USA
    J Clin Microbiol 46:2477-90. 2008

Collaborators

Detail Information

Publications24

  1. pmc Cyber infrastructure for Fusarium: three integrated platforms supporting strain identification, phylogenetics, comparative genomics and knowledge sharing
    Bongsoo Park
    Department of Plant Pathology, Integrative Biosciences Graduate Program in Bioinformatics and Genomics, The Pennsylvania State University, University Park, PA 16802, USA
    Nucleic Acids Res 39:D640-6. 2011
    ..The FCP is designed to serve as an online community forum for sharing and preserving accumulated experience and knowledge to support future research and education...
  2. doi request reprint Phylogenetic analyses of RPB1 and RPB2 support a middle Cretaceous origin for a clade comprising all agriculturally and medically important fusaria
    Kerry O'Donnell
    Bacterial Foodborne Pathogens and Mycology Research Unit, National Center for Agricultural Utilization Research, US Department of Agriculture, Agricultural Research Service, 1815 North University Street, Peoria, IL 61604, USA
    Fungal Genet Biol 52:20-31. 2013
    ..Our results support two competing hypotheses for the circumscription of Fusarium and provide a framework for future comparative phylogenetic and genomic analyses of this agronomically and medically important genus...
  3. doi request reprint Phylogenetic diversity of insecticolous fusaria inferred from multilocus DNA sequence data and their molecular identification via FUSARIUM-ID and Fusarium MLST
    Kerry O'Donnell
    National Center for Agricultural Utilization Research, U S Department of Agriculture, Peoria, IL 61604 3999, USA
    Mycologia 104:427-45. 2012
    ..fusariumdb.org) at Pennsylvania State University's Department of Plant Pathology and Fusarium MLST (http://www.cbs.knaw.nl/fusarium) at the Centraalbureau voor Schimmelcultures (CBS-KNAW) Fungal Biodiversity Center...
  4. pmc Evidence implicating Thamnostylum lucknowense as an etiological agent of rhino-orbital mucormycosis
    Immaculata Xess
    Department of Microbiology, All India Institute of Medical Sciences, New Delhi, India
    J Clin Microbiol 50:1491-4. 2012
    ..To our knowledge, this report presents the first data implicating this mucoraceous fungus as a mycotic agent of human infection...
  5. doi request reprint Phylogeny and historical biogeography of true morels (Morchella) reveals an early Cretaceous origin and high continental endemism and provincialism in the Holarctic
    Kerry O'Donnell
    Bacterial Foodborne Pathogens and Mycology Research Unit, National Center for Agricultural Utilization Research, US Department of Agriculture, Agricultural Research Service, 1815 North University Street, Peoria, IL 61604, USA
    Fungal Genet Biol 48:252-65. 2011
    ..Morels also appear to have retained the ancestral fruit body plan, which has remained remarkably static since the Cretaceous...
  6. doi request reprint Soybean sudden death syndrome species diversity within north and South america revealed by multilocus genotyping
    Kerry O'Donnell
    Microbial Genomics Research Unit, National Center for Agricultural Utilization Research, US Department of Agriculture, Agriculture Research Service, Peoria, IL 61604, USA
    Phytopathology 100:58-71. 2010
    ..The validated MLGT array provides a unique molecular diagnostic for the accurate identification and molecular surveillance of these economically important plant pathogens...
  7. pmc Novel multilocus sequence typing scheme reveals high genetic diversity of human pathogenic members of the Fusarium incarnatum-F. equiseti and F. chlamydosporum species complexes within the United States
    Kerry O'Donnell
    Microbial Genomics Research Unit, National Center for Agricultural Utilization Research, Agricultural Research Service, United States Department of Agriculture, Peoria, Illinois 61604 3999, USA
    J Clin Microbiol 47:3851-61. 2009
    ..To our knowledge, these five species heretofore have not been reported to cause mycotic infections (i.e., F. armeniacum, F. brachygibbosum, F. flocciferum, and two unnamed Fusarium species within the F. tricinctum species complex)...
  8. ncbi request reprint A two-locus DNA sequence database for typing plant and human pathogens within the Fusarium oxysporum species complex
    Kerry O'Donnell
    Microbial Genomics Research Unit, Agricultural Research Service, US Department of Agriculture, Peoria, IL 61604, USA
    Fungal Genet Biol 46:936-48. 2009
    ..We also evaluated enniatin, fumonisin and moniliformin mycotoxin production in vitro within a phylogenetic framework...
  9. doi request reprint Multilocus genotyping and molecular phylogenetics resolve a novel head blight pathogen within the Fusarium graminearum species complex from Ethiopia
    Kerry O'Donnell
    Microbial Genomics Research Unit, National Center for Agricultural Utilization Research, U S Department of Agriculture, Agricultural Research Service, 1815 N University St, Peoria, IL 61604, USA
    Fungal Genet Biol 45:1514-22. 2008
    ..Herein the FHB pathogen from Ethiopia is formally described as a novel species...
  10. pmc Molecular phylogenetic diversity, multilocus haplotype nomenclature, and in vitro antifungal resistance within the Fusarium solani species complex
    Kerry O'Donnell
    Microbial Genomics and Bioprocessing Research Unit, National Center for Agricultural Utilization Research, Agricultural Research Service, U S Department of Agriculture, 1815 North University Street, Peoria, IL 61604 3999, USA
    J Clin Microbiol 46:2477-90. 2008
    ..The in vitro activities of 10 antifungals tested against 19 isolates representing 18 species that span the breadth of the FSSC phylogeny show that members of this complex are broadly resistant to these drugs...
  11. pmc Phylogenetic diversity and microsphere array-based genotyping of human pathogenic Fusaria, including isolates from the multistate contact lens-associated U.S. keratitis outbreaks of 2005 and 2006
    Kerry O'Donnell
    Microbial Genomics and Bioprocessing Research Unit, Agricultural Research Service, U S Department of Agriculture, 1815 North University Street, Peoria, IL 61604 3999, USA
    J Clin Microbiol 45:2235-48. 2007
    ..The high degree of phylogenetic diversity represented among the corneal isolates is consistent with multiple sources of contamination...
  12. pmc Internet-accessible DNA sequence database for identifying fusaria from human and animal infections
    Kerry O'Donnell
    Bacterial Foodborne Pathogens and Mycology Research Unit, National Center for Agricultural Utilization Research, Agricultural Research Service, United States Department of Agriculture, Peoria, IL 61604 3999, USA
    J Clin Microbiol 48:3708-18. 2010
    ....
  13. pmc Members of the Fusarium solani species complex that cause infections in both humans and plants are common in the environment
    Ning Zhang
    Department of Plant Pathology, The Pennsylvania State University, University Park, PA 16802, USA
    J Clin Microbiol 44:2186-90. 2006
    ..The major finding of this study is that FSSC-associated mycoses of humans and other animals have origins in a broad phylogenetic spectrum, indicating widespread ability to cause infection in this diverse species complex...
  14. ncbi request reprint An adaptive evolutionary shift in Fusarium head blight pathogen populations is driving the rapid spread of more toxigenic Fusarium graminearum in North America
    Todd J Ward
    Microbial Genomics and Bioprocessing Research Unit, Agricultural Research Service, United States Department of Agriculture, Peoria, IL 61604, USA
    Fungal Genet Biol 45:473-84. 2008
    ..The discovery of this previously unrecognized pathogen diversity has significant implications for food safety and cereal production in North America...
  15. ncbi request reprint Genealogical concordance between the mating type locus and seven other nuclear genes supports formal recognition of nine phylogenetically distinct species within the Fusarium graminearum clade
    Kerry O'Donnell
    National Center for Agricultural Utilization Research, US Department of Agriculture, Agricultural Research Service, Peoria, IL 61604, USA
    Fungal Genet Biol 41:600-23. 2004
    ..Species rank is formally proposed for the eight unnamed species within the Fg clade using fixed nucleotide characters...
  16. pmc Widespread occurrence of diverse human pathogenic types of the fungus Fusarium detected in plumbing drains
    Dylan P G Short
    Department of Plant Pathology, Pennsylvania State University, University Park, PA 16802, USA
    J Clin Microbiol 49:4264-72. 2011
    ..Six major Fusarium STs were frequently isolated from plumbing drains within a broad geographic area and were identical to STs frequently associated with human infections...
  17. pmc Ancestral polymorphism and adaptive evolution in the trichothecene mycotoxin gene cluster of phytopathogenic Fusarium
    Todd J Ward
    Microbial Genomics and Bioprocessing Research Unit, National Center for Agricultural Utilization Research, U S Department of Agriculture, Agricultural Research Service, 1815 North University Street, Peoria, IL 61604, USA
    Proc Natl Acad Sci U S A 99:9278-83. 2002
    ..Chemotype-specific differences in selective constraint and evidence of adaptive evolution within trichothecene genes are also reported...
  18. pmc Genetic diversity of human pathogenic members of the Fusarium oxysporum complex inferred from multilocus DNA sequence data and amplified fragment length polymorphism analyses: evidence for the recent dispersion of a geographically widespread clonal lineag
    Kerry O'Donnell
    National Center for Agricultural Utilization Research, U S Department of Agriculture, Peoria, IL 61604 3999, USA
    J Clin Microbiol 42:5109-20. 2004
    ..S. hospitals, providing support for the hypothesis that hospitals may serve as a reservoir for nosocomial fusarial infections...
  19. doi request reprint Nivalenol-type populations of Fusarium graminearum and F. asiaticum are prevalent on wheat in southern Louisiana
    Liane Rosewich Gale
    Department of Plant Pathology, University of Minnesota, St Paul, USA
    Phytopathology 101:124-34. 2011
    ..S. NIV types accumulated four times less trichothecene toxin than DON types on inoculated wheat. This is the first report of NIV-type populations of F. graminearum s. s. and F. asiaticum in the United States...
  20. ncbi request reprint An inordinate fondness for Fusarium: phylogenetic diversity of fusaria cultivated by ambrosia beetles in the genus Euwallacea on avocado and other plant hosts
    Matthew T Kasson
    Department of Plant Pathology and Environmental Microbiology, The Pennsylvania State University, University Park, PA 16802, USA
    Fungal Genet Biol 56:147-57. 2013
    ..Overall, these data are consistent with a strong evolutionary trend toward obligate symbiosis coupled with secondary contact and interspecific hybridization...
  21. pmc Clonality, recombination, and hybridization in the plumbing-inhabiting human pathogen Fusarium keratoplasticum inferred from multilocus sequence typing
    Dylan P G Short
    Department of Plant Pathology, University of California, Davis, 1636 E Alisal St, Salinas, CA 93905, USA
    BMC Evol Biol 14:91. 2014
    ....
  22. doi request reprint Phylogenetic relationships among members of the Fusarium solani species complex in human infections and the descriptions of F. keratoplasticum sp. nov. and F. petroliphilum stat. nov
    Dylan P G Short
    Department of Plant Pathology, Penn State University, University Park, PA, United States
    Fungal Genet Biol 53:59-70. 2013
    ..We speculate that the inferred phenotypic variability in these species is the result of the almost entirely anthropogenic sources from which they are derived, including biofilms on plumbing systems...
  23. pmc Chronic rhinofacial mucormycosis caused by Mucor irregularis (Rhizomucor variabilis) in India
    B M Hemashettar
    Hi Tech Health Care and Diagnostic Center, Pvt Ltd, Belgaum 590 002, India
    J Clin Microbiol 49:2372-5. 2011
    ..The mucoralean mold cultured from a nasal biopsy specimen was determined by multilocus DNA sequence data to be conspecific with M. irregularis...
  24. pmc Molecular phylogenetic diversity of dermatologic and other human pathogenic fusarial isolates from hospitals in northern and central Italy
    Quirico Migheli
    Dipartimento di Protezione delle Piante, Centro per la Conservazione e la Valorizzazione della Biodiversità Vegetale, and Unità di Ricerca Istituto Nazionale di Biostrutture e Biosistemi, Universita degli Studi di Sassari, Sassari, Italy
    J Clin Microbiol 48:1076-84. 2010
    ..In addition, the results of a pathogenicity experiment revealed that the human isolate of F. guttiforme was able to induce fusariosis of pineapple, heretofore its only known host...