Daniel K Manter

Summary

Affiliation: Agricultural Research Service
Country: USA

Publications

  1. ncbi request reprint Pyrosequencing reveals a highly diverse and cultivar-specific bacterial endophyte community in potato roots
    Daniel K Manter
    USDA ARS, Soil Plant Nutrient Research Unit, Fort Collins, CO, USA
    Microb Ecol 60:157-66. 2010
  2. doi request reprint Enterobacter soli sp. nov.: a lignin-degrading γ-proteobacteria isolated from soil
    Daniel K Manter
    Soil Plant Nutrient Research Unit, USDA ARS, Fort Collins, CO 80526 8119, USA
    Curr Microbiol 62:1044-9. 2011
  3. pmc Negative effects of sample pooling on PCR-based estimates of soil microbial richness and community structure
    Daniel K Manter
    USDA ARS, Soil Plant Nutrient Research Unit, Fort Collins, CO 80526, USA
    Appl Environ Microbiol 76:2086-90. 2010
  4. ncbi request reprint Antimicrobial activity of extractable conifer heartwood compounds toward Phytophthora ramorum
    Daniel K Manter
    USDA ARS, Soil Plant Nutrient Research Unit, Ft Collins, CO, 80526, USA
    J Chem Ecol 33:2133-47. 2007
  5. ncbi request reprint Use of the ITS primers, ITS1F and ITS4, to characterize fungal abundance and diversity in mixed-template samples by qPCR and length heterogeneity analysis
    Daniel K Manter
    USDA ARS, Soil Plant Nutrient Research Unit, Ft Collins, CO, United States
    J Microbiol Methods 71:7-14. 2007
  6. ncbi request reprint Growth response of Douglas-fir seedlings to nitrogen fertilization: importance of Rubisco activation state and respiration rates
    Daniel K Manter
    USDA Forest Service, PNW Research Station, 3200 SW Jefferson Way, Corvallis, OR, USA
    Tree Physiol 25:1015-21. 2005
  7. ncbi request reprint Potential impact of soil microbiomes on the leaf metabolome and on herbivore feeding behavior
    Dayakar V Badri
    Center for Rhizosphere Biology, Department of Horticulture and Landscape Architecture, Colorado State University, Fort Collins, CO 80523, USA
    New Phytol 198:264-73. 2013
  8. pmc An ABC transporter mutation alters root exudation of phytochemicals that provoke an overhaul of natural soil microbiota
    Dayakar V Badri
    Center for Rhizosphere Biology and Department of Horticulture and Landscape Architecture, Colorado State University, Fort Collins, Colorado 80523, USA
    Plant Physiol 151:2006-17. 2009
  9. doi request reprint Isolation and characterization of lignin-degrading bacteria from rainforest soils
    Xing Feng Huang
    Department of Chemical and Biological Engineering, Colorado State University, Fort Collins, Colorado 80523 1370, USA
    Biotechnol Bioeng 110:1616-26. 2013
  10. doi request reprint Reduction of selenite to elemental red selenium by Pseudomonas sp. Strain CA5
    William J Hunter
    USDA ARS, Fort Collins, CO 80526 8119, USA
    Curr Microbiol 58:493-8. 2009

Collaborators

Detail Information

Publications22

  1. ncbi request reprint Pyrosequencing reveals a highly diverse and cultivar-specific bacterial endophyte community in potato roots
    Daniel K Manter
    USDA ARS, Soil Plant Nutrient Research Unit, Fort Collins, CO, USA
    Microb Ecol 60:157-66. 2010
    ....
  2. doi request reprint Enterobacter soli sp. nov.: a lignin-degrading γ-proteobacteria isolated from soil
    Daniel K Manter
    Soil Plant Nutrient Research Unit, USDA ARS, Fort Collins, CO 80526 8119, USA
    Curr Microbiol 62:1044-9. 2011
    ..5%). The cellular fatty acid profile, G + C content, phenotypic and biochemical characteristics were consistent with its placement in the genus Enterobacter. The name Enterobacter soli is proposed for this bacterium...
  3. pmc Negative effects of sample pooling on PCR-based estimates of soil microbial richness and community structure
    Daniel K Manter
    USDA ARS, Soil Plant Nutrient Research Unit, Fort Collins, CO 80526, USA
    Appl Environ Microbiol 76:2086-90. 2010
    ..In conclusion, although pooling reduces sample numbers and variability, it could mask a significant portion of the detectable microbial community, particularly for fungi due to their higher spatial heterogeneity...
  4. ncbi request reprint Antimicrobial activity of extractable conifer heartwood compounds toward Phytophthora ramorum
    Daniel K Manter
    USDA ARS, Soil Plant Nutrient Research Unit, Ft Collins, CO, 80526, USA
    J Chem Ecol 33:2133-47. 2007
    ..ramorum leaf blight significantly limited the accumulation of P. ramorum DNA in the litter layer, compared with heartwood chips from redwood...
  5. ncbi request reprint Use of the ITS primers, ITS1F and ITS4, to characterize fungal abundance and diversity in mixed-template samples by qPCR and length heterogeneity analysis
    Daniel K Manter
    USDA ARS, Soil Plant Nutrient Research Unit, Ft Collins, CO, United States
    J Microbiol Methods 71:7-14. 2007
    ..Variability associated with the individual steps of the LH-qPCR analysis was also determined from environmental samples...
  6. ncbi request reprint Growth response of Douglas-fir seedlings to nitrogen fertilization: importance of Rubisco activation state and respiration rates
    Daniel K Manter
    USDA Forest Service, PNW Research Station, 3200 SW Jefferson Way, Corvallis, OR, USA
    Tree Physiol 25:1015-21. 2005
    ....
  7. ncbi request reprint Potential impact of soil microbiomes on the leaf metabolome and on herbivore feeding behavior
    Dayakar V Badri
    Center for Rhizosphere Biology, Department of Horticulture and Landscape Architecture, Colorado State University, Fort Collins, CO 80523, USA
    New Phytol 198:264-73. 2013
    ....
  8. pmc An ABC transporter mutation alters root exudation of phytochemicals that provoke an overhaul of natural soil microbiota
    Dayakar V Badri
    Center for Rhizosphere Biology and Department of Horticulture and Landscape Architecture, Colorado State University, Fort Collins, Colorado 80523, USA
    Plant Physiol 151:2006-17. 2009
    ....
  9. doi request reprint Isolation and characterization of lignin-degrading bacteria from rainforest soils
    Xing Feng Huang
    Department of Chemical and Biological Engineering, Colorado State University, Fort Collins, Colorado 80523 1370, USA
    Biotechnol Bioeng 110:1616-26. 2013
    ..These findings provide important evidence that bacterial enzymes can degrade and/or modify lignin and contribute to the release of fermentable sugars from lignocellulose...
  10. doi request reprint Reduction of selenite to elemental red selenium by Pseudomonas sp. Strain CA5
    William J Hunter
    USDA ARS, Fort Collins, CO 80526 8119, USA
    Curr Microbiol 58:493-8. 2009
    ..16S rRNA gene sequence alignment and fatty acid analysis were used to identify the bacterium as a novel species of Pseudomonas related to P. argentinensis, P. flavescens, and P. straminea...
  11. doi request reprint Pseudomonas seleniipraecipitatus sp. nov.: a selenite reducing γ-proteobacteria isolated from soil
    William J Hunter
    USDA ARS, 2150 D Centre Avenue, Fort Collins, CO, 80526 8119, USA
    Curr Microbiol 62:565-9. 2011
    ..9%). The cellular fatty acid profile, GC content, phenotypic properties, and biochemical characteristics were consistent with its placement within the genus Pseudomonas. The name P. seleniipraecipitatus is proposed for these bacteria...
  12. doi request reprint Effect of plant sterols and tannins on Phytophthora ramorum growth and sporulation
    Rachel A Stong
    USDA ARS, Soil Plant Nutrient Research, Fort Collins, CO, USA
    J Chem Ecol 39:733-43. 2013
    ..Across all treatment combinations, P. ramorum growth and sporulation correlated strongly with the amount of ELISA-detectable elicitin (R (2) = 0.791 and 0.961, respectively)...
  13. doi request reprint Pseudomonas kuykendallii sp. nov.: a novel γ-proteobacteria isolated from a hexazinone degrading bioreactor
    William J Hunter
    USDA ARS, Fort Collins, CO 80526 8119, USA
    Curr Microbiol 65:170-5. 2012
    ..3 %), C(16:1) ω6c/C(16:1) ω7c (27.4 %), C(16:0) (20.6 %), C(12:0) (7.9 %), C(12:0) 3-OH (4.5 %), and C(10:0) 3-OH (3.1 %). The name Pseudomonas kuykendallii sp. nov. is proposed for these bacteria...
  14. ncbi request reprint Soil fungal abundance and diversity: another victim of the invasive plant Centaurea maculosa
    Amanda K Broz
    Center for Rhizosphere Biology, Colorado State University, Fort Collins, CO, USA
    ISME J 1:763-5. 2007
    ..Our results demonstrate that this invasive weed can have significant effects not only on visible aboveground biodiversity but also on the native soil microbial community that extends beyond its rhizosphere...
  15. pmc Root exudates regulate soil fungal community composition and diversity
    Corey D Broeckling
    Department of Horticulture and Landscape Architecture, Colorado State University, Fort Collins, CO 80523, USA
    Appl Environ Microbiol 74:738-44. 2008
    ..This study establishes root exudates as a mechanism through which a plant is able to regulate soil fungal community composition...
  16. doi request reprint Bio-reduction of selenite to elemental red selenium by Tetrathiobacter kashmirensis
    William J Hunter
    USDA ARS, Fort Collins, CO 80526 8119, USA
    Curr Microbiol 57:83-8. 2008
    ..This organism might be useful in bioreactors designed to remove selenite from contaminated water...
  17. doi request reprint Biotransformation of ferulic acid to 4-vinylguaiacol by Enterobacter soli and E. aerogenes
    William J Hunter
    Soil Plant Nutrient Research Unit, USDA ARS, Fort Collins, CO 80526 8119, USA
    Curr Microbiol 65:752-7. 2012
    ..E. soli or E. aerogenes might be useful as a means of biotransforming ferulic acid to 4-VG...
  18. pmc Influence of ATP-Binding Cassette Transporters in Root Exudation of Phytoalexins, Signals, and in Disease Resistance
    Dayakar V Badri
    Center for Rhizosphere Biology, Colorado State University Fort Collins, CO, USA
    Front Plant Sci 3:149. 2012
    ..In summary, full-size transporters are involved in root secretion of phytochemicals...
  19. pmc Plant origin and ploidy influence gene expression and life cycle characteristics in an invasive weed
    Amanda K Broz
    Center for Rhizosphere Biology, Colorado State University, Fort Collins, CO 80523 1173, USA
    BMC Plant Biol 9:33. 2009
    ..We monitored plant performance characteristics and life cycle habits and characterized the expression of genes related to constitutive defense and genome stability using quantitative PCR...
  20. doi request reprint Ethanol attracts scolytid beetles to Phytophthora ramorum cankers on coast live oak
    Rick G Kelsey
    USDA Forest Service, Pacific Northwest Research Station, Corvallis, OR 97331, USA
    J Chem Ecol 39:494-506. 2013
    ..ramorum-infected coast live oaks, and lay the groundwork for future efforts to prolong the survival of individual trees of this keystone species...
  21. doi request reprint Increased electrical output when a bacterial ABTS oxidizer is used in a microbial fuel cell
    William J Hunter
    USDA ARS, Fort Collins, CO, 80526 8119, USA
    Curr Microbiol 62:633-8. 2011
    ..No increase in cell voltage was observed when no mediator was present. Organisms that produce and release oxidizers into the media may prove useful as bio-cathodes by improving the electrical output of MFCs...
  22. ncbi request reprint A/C(i) curve analysis across a range of woody plant species: influence of regression analysis parameters and mesophyll conductance
    Daniel K Manter
    USDA Forest Service, PNW Research Station, 3200 Jefferson Way, Corvallis, OR 97331, USA
    J Exp Bot 55:2581-8. 2004
    ..2+/-6.2 and 42.2+/-4.4 micromol m(-2) s(-1), and A/C(c) curve estimates were 41.2+/-7.1 micromol m(-2) s(-1) and 45.0+/-4.8 micromol m(-2) s(-1), for the conifer and broadleaf species, respectively...