Steven B Cannon

Summary

Affiliation: Agricultural Research Service
Country: USA

Publications

  1. pmc Polyploidy did not predate the evolution of nodulation in all legumes
    Steven B Cannon
    United States Department of Agriculture Agricultural Research Service, Corn Insects and Crop Genomics Research Unit, Iowa State University, Ames, Iowa, United States of America
    PLoS ONE 5:e11630. 2010
  2. pmc RNA-Seq Atlas of Glycine max: a guide to the soybean transcriptome
    Andrew J Severin
    Department of Agronomy, Iowa State University, Ames, IA 50011, USA
    BMC Plant Biol 10:160. 2010
  3. ncbi request reprint Multiple polyploidy events in the early radiation of nodulating and nonnodulating legumes
    Steven B Cannon
    USDA Agricultural Research Service, Corn Insects and Crop Genetics Research Unit, Ames, IA
    Mol Biol Evol 32:193-210. 2015
  4. ncbi request reprint Comprehensive characterization and RNA-Seq profiling of the HD-Zip transcription factor family in soybean (Glycine max) during dehydration and salt stress
    Vikas Belamkar
    Department of Agronomy, Iowa State University, Ames, IA 50011, USA
    BMC Genomics 15:950. 2014
  5. pmc Evolutionary and comparative analyses of the soybean genome
    Steven B Cannon
    United States Department of Agriculture Agricultural Research Service, Corn Insects and Crop Genetics Research Unit, Ames, IA 50011, USA
    Breed Sci 61:437-44. 2012
  6. pmc An analysis of synteny of Arachis with Lotus and Medicago sheds new light on the structure, stability and evolution of legume genomes
    David J Bertioli
    Department of Genomic Sciences and Biotechnology, Catholic University of Brasilia, SGAN 916, Brasilia, DF, Brazil
    BMC Genomics 10:45. 2009
  7. pmc High-throughput SNP discovery through deep resequencing of a reduced representation library to anchor and orient scaffolds in the soybean whole genome sequence
    David L Hyten
    Soybean Genomics and Improvement Laboratory, US Department of Agriculture, Agricultural Research Service, Beltsville, MD 20705, USA
    BMC Genomics 11:38. 2010
  8. pmc Integrating microarray analysis and the soybean genome to understand the soybeans iron deficiency response
    Jamie A O'Rourke
    Department of Genetics, Developmental and Cellular Biology, Iowa State University, Ames, Iowa 50011, USA
    BMC Genomics 10:376. 2009
  9. pmc Evolutionary genomics of LysM genes in land plants
    Xue Cheng Zhang
    Division of Plant Sciences and National Center for Soybean Biotechnology, University of Missouri, Columbia, MO 65211, USA
    BMC Evol Biol 9:183. 2009
  10. ncbi request reprint Gene expression patterns are correlated with genomic and genic structure in soybean
    Jenna L Woody
    Department of Agronomy, Iowa State University, Ames, 50011, USA
    Genome 54:10-8. 2011

Collaborators

Detail Information

Publications18

  1. pmc Polyploidy did not predate the evolution of nodulation in all legumes
    Steven B Cannon
    United States Department of Agriculture Agricultural Research Service, Corn Insects and Crop Genomics Research Unit, Iowa State University, Ames, Iowa, United States of America
    PLoS ONE 5:e11630. 2010
    ..g., mimosas, acacias)--which diverged from the papilionoid legumes around 58 million years ago, soon after the origin of the legumes...
  2. pmc RNA-Seq Atlas of Glycine max: a guide to the soybean transcriptome
    Andrew J Severin
    Department of Agronomy, Iowa State University, Ames, IA 50011, USA
    BMC Plant Biol 10:160. 2010
    ..Patterns of gene expression provide insight into functions of genes with unknown annotation...
  3. ncbi request reprint Multiple polyploidy events in the early radiation of nodulating and nonnodulating legumes
    Steven B Cannon
    USDA Agricultural Research Service, Corn Insects and Crop Genetics Research Unit, Ames, IA
    Mol Biol Evol 32:193-210. 2015
    ..However, there are numerous nonnodulating lineages in both clades, making it unclear whether the phylogenetic distribution of nodulation is due to independent gains or a single origin followed by multiple losses. ..
  4. ncbi request reprint Comprehensive characterization and RNA-Seq profiling of the HD-Zip transcription factor family in soybean (Glycine max) during dehydration and salt stress
    Vikas Belamkar
    Department of Agronomy, Iowa State University, Ames, IA 50011, USA
    BMC Genomics 15:950. 2014
    ..Findings in these species suggest HD-Zip genes as high priority candidates for crop improvement...
  5. pmc Evolutionary and comparative analyses of the soybean genome
    Steven B Cannon
    United States Department of Agriculture Agricultural Research Service, Corn Insects and Crop Genetics Research Unit, Ames, IA 50011, USA
    Breed Sci 61:437-44. 2012
    ..Methods of translating information between species in the Phaseoleae range from design of markers for marker assisted selection, to transformation with Agrobacterium or with other experimental transformation methods...
  6. pmc An analysis of synteny of Arachis with Lotus and Medicago sheds new light on the structure, stability and evolution of legume genomes
    David J Bertioli
    Department of Genomic Sciences and Biotechnology, Catholic University of Brasilia, SGAN 916, Brasilia, DF, Brazil
    BMC Genomics 10:45. 2009
    ..To do this we placed on the Arachis map, comparative anchor markers defined using a previously described bioinformatics pipeline. Also we investigated the possible role of transposons in the patterns of synteny that were observed...
  7. pmc High-throughput SNP discovery through deep resequencing of a reduced representation library to anchor and orient scaffolds in the soybean whole genome sequence
    David L Hyten
    Soybean Genomics and Improvement Laboratory, US Department of Agriculture, Agricultural Research Service, Beltsville, MD 20705, USA
    BMC Genomics 11:38. 2010
    ....
  8. pmc Integrating microarray analysis and the soybean genome to understand the soybeans iron deficiency response
    Jamie A O'Rourke
    Department of Genetics, Developmental and Cellular Biology, Iowa State University, Ames, Iowa 50011, USA
    BMC Genomics 10:376. 2009
    ..To better understand the effect of iron availability on soybean yield, we identified genes in two near isogenic lines with changes in expression patterns when plants were grown in iron sufficient and iron deficient conditions...
  9. pmc Evolutionary genomics of LysM genes in land plants
    Xue Cheng Zhang
    Division of Plant Sciences and National Center for Soybean Biotechnology, University of Missouri, Columbia, MO 65211, USA
    BMC Evol Biol 9:183. 2009
    ..However, the majority of LysM genes in plants remain functionally uncharacterized and the evolutionary history of complex LysM genes remains elusive...
  10. ncbi request reprint Gene expression patterns are correlated with genomic and genic structure in soybean
    Jenna L Woody
    Department of Agronomy, Iowa State University, Ames, 50011, USA
    Genome 54:10-8. 2011
    ....
  11. pmc Complementary genetic and genomic approaches help characterize the linkage group I seed protein QTL in soybean
    Yung Tsi Bolon
    United States Department of Agriculture Agricultural Research Service, Plant Research Unit, St Paul, MN 55108, USA
    BMC Plant Biol 10:41. 2010
    ..A quantitative trait locus (QTL) on Linkage Group I (LG I) of soybean (Glycine max (L.) Merrill) has a striking effect on seed protein content...
  12. pmc Genome-wide characterization of nonreference transposons reveals evolutionary propensities of transposons in soybean
    Zhixi Tian
    Department of Agronomy, Purdue University, West Lafayette, Indiana 47907, USA
    Plant Cell 24:4422-36. 2012
    ....
  13. pmc Changes in twelve homoeologous genomic regions in soybean following three rounds of polyploidy
    Andrew J Severin
    Department of Agronomy, Iowa State University, Ames, Iowa 50011, USA
    Plant Cell 23:3129-36. 2011
    ....
  14. pmc Pericentromeric effects shape the patterns of divergence, retention, and expression of duplicated genes in the paleopolyploid soybean
    Jianchang Du
    Department of Agronomy, Purdue University, West Lafayette, Indiana 47907, USA
    Plant Cell 24:21-32. 2012
    ....
  15. ncbi request reprint The model legume genomes
    Steven B Cannon
    United States Department of Agriculture, Agricultural Research Service, Ames, IA, USA
    Methods Mol Biol 1069:1-14. 2013
    ..Similar considerations (about gene environments and genome structure) will likely need to be taken into account for any model or crop species. ..
  16. ncbi request reprint Evolutionary conservation, diversity and specificity of LTR-retrotransposons in flowering plants: insights from genome-wide analysis and multi-specific comparison
    Jianchang Du
    Department of Agronomy, Purdue University, West Lafayette, IN 47907, USA
    Plant J 63:584-98. 2010
    ....
  17. pmc SoyBase, the USDA-ARS soybean genetics and genomics database
    David Grant
    USDA ARS CICGRU, Department of Agronomy, Iowa State University, Ames, IA 50011, USA
    Nucleic Acids Res 38:D843-6. 2010
    ..SoyBase is the repository for controlled vocabularies for soybean growth, development and trait terms, which are also linked to the more general plant ontologies. SoyBase can be accessed at http://soybase.org...