Giulia Kennedy

Summary

Affiliation: Affymetrix Inc
Country: USA

Publications

  1. ncbi request reprint Large-scale genotyping of complex DNA
    Giulia C Kennedy
    Affymetrix, 3380 Central Expressway, Santa Clara, California 95051, USA
    Nat Biotechnol 21:1233-7. 2003
  2. pmc Phi29 polymerase based random amplification of viral RNA as an alternative to random RT-PCR
    Nicolas Berthet
    1Genotyping of Pathogens and Public Health Technological Platform, Institut Pasteur, Paris, France
    BMC Mol Biol 9:77. 2008
  3. pmc A genome-wide linkage analysis of alcoholism on microsatellite and single-nucleotide polymorphism data, using alcohol dependence phenotypes and electroencephalogram measures
    Chun Zhang
    Genomics Collaborations Department, Affymetrix, Santa Clara, CA 95051, USA
    BMC Genet 6:S17. 2005
  4. pmc Description of the data from the Collaborative Study on the Genetics of Alcoholism (COGA) and single-nucleotide polymorphism genotyping for Genetic Analysis Workshop 14
    Howard J Edenberg
    Department of Biochemistry and Molecular Biology, Indiana University School of Medicine, 635 Barnhill Drive, Indianapolis, IN, USA
    BMC Genet 6:S2. 2005
  5. pmc Assessment of algorithms for high throughput detection of genomic copy number variation in oligonucleotide microarray data
    Agnes Baross
    Genome Sciences Centre, BC Cancer Agency, British Columbia Cancer Agency, Suite 100, 570 West 7th Avenue, Vancouver, BC, V5Z 4S6, Canada
    BMC Bioinformatics 8:368. 2007

Collaborators

  • Jing Huang
  • Wei Min Liu
  • Guoying Liu
  • Xiaojun Di
  • Hajime Matsuzaki
  • Manqiu Cao
  • Chun Zhang
  • Nicolas Berthet
  • Agnes Baross
  • Simon Cawley
  • Howard J Edenberg
  • Christian Korfhage
  • Stewart T Cole
  • Rayna Stamboliyska
  • Sven van Ooyen
  • India Leclercq
  • Iain G Old
  • Jean Claude Manuguerra
  • Katherine A Kong
  • Philip Dickinson
  • Laurent Dacheux
  • Anita K Reinhardt
  • Christophe Batejat
  • Herve Bourhy
  • Hong Qian
  • Patrice Eydoux
  • Marco A Marra
  • Sylvie Langlois
  • Adrian Ally
  • Allen D Delaney
  • Jennifer Asano
  • H Irene Li
  • Tarun Nayar
  • Stephane Flibotte
  • Mabel Brown-John
  • Anne Go
  • Nicole Fernandes
  • Susanna Y Chan
  • J M Friedman
  • Patricia Birch
  • Mark Hansen
  • Kimberly F Doheny
  • Celeste McBride
  • Harley Gorrell
  • Todd Rubano
  • Kevin Jones
  • Richard Chiles
  • James Pettengill
  • Gregory Marcus
  • Ya Yu Tsai
  • Laura J Bierut
  • Tony Hinrichs
  • Mark Kelleher
  • Rhoberta Steeke
  • Paul Boyce
  • Bernice Porjesz
  • Jay A Tischfield
  • Sarah Shaw Murray
  • Arnold Oliphant
  • John P Rice
  • Elizabeth W Pugh
  • Henri Begleiter
  • Stu Shannon

Detail Information

Publications5

  1. ncbi request reprint Large-scale genotyping of complex DNA
    Giulia C Kennedy
    Affymetrix, 3380 Central Expressway, Santa Clara, California 95051, USA
    Nat Biotechnol 21:1233-7. 2003
    ..We also determined the ancestral allele for 8,386 SNPs by genotyping chimpanzee and gorilla DNA. WGSA is highly scaleable and enables the creation of ultrahigh density SNP maps for use in genetic studies...
  2. pmc Phi29 polymerase based random amplification of viral RNA as an alternative to random RT-PCR
    Nicolas Berthet
    1Genotyping of Pathogens and Public Health Technological Platform, Institut Pasteur, Paris, France
    BMC Mol Biol 9:77. 2008
    ..We adapted the QuantiTect Whole Transcriptome Kit (Qiagen) to our purposes and designated the method as Whole Transcriptome Amplification (WTA)...
  3. pmc A genome-wide linkage analysis of alcoholism on microsatellite and single-nucleotide polymorphism data, using alcohol dependence phenotypes and electroencephalogram measures
    Chun Zhang
    Genomics Collaborations Department, Affymetrix, Santa Clara, CA 95051, USA
    BMC Genet 6:S17. 2005
    ..Adding the microsatellite data to the combined SNP dataset improved the results only marginally. The results indicated that SNPs outperform microsatellites with the densest marker sets performing the best...
  4. pmc Description of the data from the Collaborative Study on the Genetics of Alcoholism (COGA) and single-nucleotide polymorphism genotyping for Genetic Analysis Workshop 14
    Howard J Edenberg
    Department of Biochemistry and Molecular Biology, Indiana University School of Medicine, 635 Barnhill Drive, Indianapolis, IN, USA
    BMC Genet 6:S2. 2005
    ..CIDR, Affymetrix, and Illumina provided single-nucleotide polymorphism genotyping of a large subset of the COGA subjects. This article briefly describes the dataset that was provided...
  5. pmc Assessment of algorithms for high throughput detection of genomic copy number variation in oligonucleotide microarray data
    Agnes Baross
    Genome Sciences Centre, BC Cancer Agency, British Columbia Cancer Agency, Suite 100, 570 West 7th Avenue, Vancouver, BC, V5Z 4S6, Canada
    BMC Bioinformatics 8:368. 2007
    ..The popularity of this technology and its associated open source data format have resulted in the development of an increasing number of software packages for the analysis of copy number changes using these SNP arrays...