Research Topics
Genomes and Genes | Viviana SimonSummaryAffiliation: Aaron Diamond AIDS Research Center Country: USA Publications
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Publications
Infectivity and replication capacity of drug-resistant human immunodeficiency virus type 1 variants isolated during primary infectionViviana Simon
Aaron Diamond AIDS Research Center, The Rockefeller University, 455 First Avenue, 7th Floor, New York, NY 10016, USA
J Virol 77:7736-45. 2003..Further studies are needed to elucidate the precise regions that are essential for these characteristics...
Determining the antiviral activity of tenofovir disoproxil fumarate in treatment-naive chronically HIV-1-infected individualsMichael Louie
Aaron Diamond AIDS Research Center, Rockefeller University, New York, NY 10016, USA
AIDS 17:1151-6. 2003..These data support further study of TDF-based regimens in simplified combinations of antiviral agents as initial treatment for chronic HIV-1 infection...
Intensification of antiretroviral therapy accelerates the decay of the HIV-1 latent reservoir and decreases, but does not eliminate, ongoing virus replicationBharat Ramratnam
Aaron Diamond AIDS Research Center, The Rockefeller University, New York, NY, USA
J Acquir Immune Defic Syndr 35:33-7. 2004..Additional studies are needed to understand the host- and pathogen-related determinants of incomplete pharmacologic control of HIV-1 replication...
Tracking the prevalence of transmitted antiretroviral drug-resistant HIV-1: a decade of experienceAnita Shet
Aaron Diamond AIDS Research Center (an affiliate of the Rockefeller University, New York, NY 10016, USA
J Acquir Immune Defic Syndr 41:439-46. 2006....
Determining the relative efficacy of highly active antiretroviral therapyMichael Louie
Aaron Diamond AIDS Research Center, The Rockefeller University, New York, New York, NY 10016, USA
J Infect Dis 187:896-900. 2003..Nevertheless, we believe that optimal treatment regimens for HIV-1 have yet to be identified and that continued research to achieve this goal is warranted...
The activity spectrum of Vif from multiple HIV-1 subtypes against APOBEC3G, APOBEC3F, and APOBEC3HMawuena Binka
Department of Microbiology, Mount Sinai School of Medicine, New York, New York, USA
J Virol 86:49-59. 2012....
Evolving patterns of HIV-1 resistance to antiretroviral agents in newly infected individualsViviana Simon
Aaron Diamond AIDS Research Center, The Rockefeller University, New York 1016, USA
AIDS 16:1511-9. 2002..The latter findings suggest transmission of viruses from subjects who have either changed or discontinued therapy...
HIV-1 dynamics in vivo: implications for therapyViviana Simon
Aaron Diamond AIDS Research Center, Rockefeller University, 455 First Avenue, New York, New York 10016, USA
Nat Rev Microbiol 1:181-90. 2003..We also discuss the obstacles that result from the ability of HIV-1 to remain dormant for a prolonged period of time in a subset of long-lived cells, despite an apparently effective antiretroviral treatment...
Discontinuation of antiretroviral therapy commenced early during the course of human immunodeficiency virus type 1 infection, with or without adjunctive vaccinationMartin Markowitz
Aaron Diamond AIDS Research Center, Rockefeller University, New York, New York 10016, USA
J Infect Dis 186:634-43. 2002....
The localization of APOBEC3H variants in HIV-1 virions determines their antiviral activityMarcel Ooms
Division of Infectious Diseases, Department of Medicine, and Department of Microbiology, Global Health and Emerging Pathogens Institute, Mount Sinai School of Medicine, New York, New York 10029 6574, USA
J Virol 84:7961-9. 2010..Thus, the antiviral activity of A3H haplotypes is determined by its incorporation into the viral core, in proximity to the reverse transcription complex...
HIV/AIDS epidemiology, pathogenesis, prevention, and treatmentViviana Simon
Aaron Diamond AIDS Research Center, The Rockefeller University, New York, NY, USA
Lancet 368:489-504. 2006..This Seminar provides an update on epidemiology, pathogenesis, treatment, and prevention interventions pertinent to HIV-1...
APOBEC3A, APOBEC3B, and APOBEC3H haplotype 2 restrict human T-lymphotropic virus type 1Marcel Ooms
Department of Microbiology, Mount Sinai School of Medicine, New York, New York, USA
J Virol 86:6097-108. 2012..Taken together, our data indicate that HTLV-1 is a likely target for multiple A3 proteins...
Moderate influence of human APOBEC3F on HIV-1 replication in primary lymphocytesLubbertus C F Mulder
Mount Sinai School of Medicine, Department of Medicine, The Global Health and Emerging Pathogens Institute, New York, New York 10029, USA
J Virol 84:9613-7. 2010..Lastly, the endogenous A3F mRNA and protein expression levels in PBMCs were considerably lower than those of A3G. Our results suggest that A3F neutralization is dispensable for HIV-1 replication in primary human T-lymphocytes...
Progestin-based contraceptive suppresses cellular immune responses in SHIV-infected rhesus macaquesNataliya Trunova
Aaron Diamond AIDS Research Center, The Rockefeller University, 455 First Ave, 7th Floor, New York, NY 10016, USA
Virology 352:169-77. 2006....
Characterization of HIV-1 integrase N-terminal mutant virusesAliza G Lloyd
The Aaron Diamond AIDS Research Center 455 First Avenue, New York, NY 10016, USA
Virology 360:129-35. 2007..We propose that the severe deficiency of these mutants exert a strong selective pressure that leads to the near total conservation of the N-terminal residue of integrase in HIV-1, HIV-2 and SIV...
Cytidine deamination induced HIV-1 drug resistanceLubbertus C F Mulder
Department of Medicine, Division of Infectious Diseases, Mount Sinai School of Medicine, One Gustave L Levy Place, Box 1090, New York, NY 10029, USA
Proc Natl Acad Sci U S A 105:5501-6. 2008....
The resistance of human APOBEC3H to HIV-1 NL4-3 molecular clone is determined by a single amino acid in VifMarcel Ooms
Department of Microbiology, Mount Sinai School of Medicine, New York, New York, United States of America
PLoS ONE 8:e57744. 2013..These studies provide an explanation for the conflicting reports regarding A3H resistance to Vif mediated degradation...
Dengue Virus Co-opts UBR4 to Degrade STAT2 and Antagonize Type I Interferon SignalingJuliet Morrison
Department of Microbiology, Icahn School of Medicine at Mount Sinai, New York, New York, United States of America Global Health and Emerging Pathogens Institute, Icahn School of Medicine at Mount Sinai, New York, New York, United States of America
PLoS Pathog 9:e1003265. 2013..Our data underscore the importance of NS5-mediated STAT2 degradation in DENV replication and identify UBR4 as a host protein that is specifically exploited by DENV to inhibit IFN-I signaling via STAT2 degradation...
Identification of microRNAs of the herpesvirus familySebastien Pfeffer
Laboratory of RNA Molecular Biology, The Rockefeller University, 1230 York Avenue, Box 186, New York, New York 10021, USA
Nat Methods 2:269-76. 2005..Generally, we predicted miRNAs in several large DNA viruses, and we could neither predict nor experimentally identify miRNAs in the genomes of small RNA viruses or retroviruses...
Dynamics of intermittent viremia during highly active antiretroviral therapy in patients who initiate therapy during chronic versus acute and early human immunodeficiency virus type 1 infectionMichele Di Mascio
Theoretical Division, Los Alamos National Laboratory, New Mexico, USA
J Virol 78:10566-73. 2004..Finally, in PHI patients the VL set point was a significant predictor of blip frequency during treatment...
Genetic basis of hypersusceptibility to protease inhibitors and low replicative capacity of human immunodeficiency virus type 1 strains in primary infectionAndrew J Leigh Brown
University of Edinburgh, Edinburgh, Scotland
J Virol 78:2242-6. 2004..This supports the view that variation in PR function is directly responsible for variation in fitness among strains in primary infection...
Sustained viremia during highly active antiretroviral therapy with accelerated proviral DNA decay in the setting of infection with syphilisNeal Padte
AIDS 17:2143-5. 2003
Origin of human immunodeficiency virus type 1 quasispecies emerging after antiretroviral treatment interruption in patients with therapeutic failureGustavo H Kijak
National Reference Center for AIDS, Department of Microbiology, School of Medicine, University of Buenos Aires, Argentina
J Virol 76:7000-9. 2002..This study demonstrates the important role that the reemergence of quasispecies plays in HIV-1 population dynamics and points out the difficulties that may be found when recycling ARV therapies with patients with treatment failure...
