Nicola Jane Mulder

Summary

Affiliation: Wellcome Trust Genome Campus
Country: UK

Publications

  1. ncbi InterPro: an integrated documentation resource for protein families, domains and functional sites
    Nicola J Mulder
    EMBL Outstation, European Bioinformatics Institute, Hinxton, Cambridge, UK
    Brief Bioinform 3:225-35. 2002
  2. ncbi The InterPro Database, 2003 brings increased coverage and new features
    Nicola J Mulder
    EMBL Outstation European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK
    Nucleic Acids Res 31:315-8. 2003
  3. ncbi InterPro, progress and status in 2005
    Nicola J Mulder
    EMBL Outstation European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK
    Nucleic Acids Res 33:D201-5. 2005
  4. ncbi New developments in the InterPro database
    Nicola J Mulder
    EMBL Outstation European Bioinformatics Institute Hinxton, Cambridge, UK
    Nucleic Acids Res 35:D224-8. 2007
  5. ncbi In silico characterization of proteins: UniProt, InterPro and Integr8
    Nicola Jane Mulder
    EMBL Outstation European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK
    Mol Biotechnol 38:165-77. 2008
  6. ncbi The InterPro database and tools for protein domain analysis
    Nicola J Mulder
    The EMBL Outstation, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK
    Curr Protoc Bioinformatics . 2008
  7. ncbi Tools and resources for identifying protein families, domains and motifs
    Nicola J Mulder
    The EMBL Outstation, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK
    Genome Biol 3:REVIEWS2001. 2002
  8. ncbi Investigating the effect of paralogs on microarray gene-set analysis
    Andre J Faure
    Computational Biology Group, Department of Clinical Laboratory Sciences, University of Cape Town, Cape Town, South Africa
    BMC Bioinformatics 12:29. 2011

Detail Information

Publications8

  1. ncbi InterPro: an integrated documentation resource for protein families, domains and functional sites
    Nicola J Mulder
    EMBL Outstation, European Bioinformatics Institute, Hinxton, Cambridge, UK
    Brief Bioinform 3:225-35. 2002
    ..Each InterPro entry lists all the matches against SWISS-PROT and TrEMBL (2,141,621 InterPro hits from 586,124 SWISS-PROT and TrEMBL protein sequences). The database is freely accessible for text- and sequence-based searches...
  2. ncbi The InterPro Database, 2003 brings increased coverage and new features
    Nicola J Mulder
    EMBL Outstation European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK
    Nucleic Acids Res 31:315-8. 2003
    ..The database is available via a webserver (http://www.ebi.ac.uk/interpro) and anonymous FTP (ftp://ftp.ebi.ac.uk/pub/databases/interpro)...
  3. ncbi InterPro, progress and status in 2005
    Nicola J Mulder
    EMBL Outstation European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK
    Nucleic Acids Res 33:D201-5. 2005
    ..The database is available for text- and sequence-based searches via a webserver (http://www.ebi.ac.uk/interpro), and for download by anonymous FTP (ftp://ftp.ebi.ac.uk/pub/databases/interpro)...
  4. ncbi New developments in the InterPro database
    Nicola J Mulder
    EMBL Outstation European Bioinformatics Institute Hinxton, Cambridge, UK
    Nucleic Acids Res 35:D224-8. 2007
    ..ebi.ac.uk/interpro), and for download by anonymous FTP (ftp://ftp.ebi.ac.uk/pub/databases/interpro). The InterProScan search tool is now also available via a web service at http://www.ebi.ac.uk/Tools/webservices/WSInterProScan.html...
  5. ncbi In silico characterization of proteins: UniProt, InterPro and Integr8
    Nicola Jane Mulder
    EMBL Outstation European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK
    Mol Biotechnol 38:165-77. 2008
    ..This article reviews the tools and resources available on the web for single and large-scale protein characterization and whole proteome analysis...
  6. ncbi The InterPro database and tools for protein domain analysis
    Nicola J Mulder
    The EMBL Outstation, Wellcome Trust Genome Campus, Hinxton, Cambridge, UK
    Curr Protoc Bioinformatics . 2008
    ..In addition, details on browsing InterPro families and domains of interest using the InterPro Web and sequence retrieval system (SRS) are provided to show users how to get the most from the resource...
  7. ncbi Tools and resources for identifying protein families, domains and motifs
    Nicola J Mulder
    The EMBL Outstation, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK
    Genome Biol 3:REVIEWS2001. 2002
    ..This article reviews the tools and resources available on the web for identifying signatures within proteins and discusses how they may be used in the analysis of new or unknown protein sequences...
  8. ncbi Investigating the effect of paralogs on microarray gene-set analysis
    Andre J Faure
    Computational Biology Group, Department of Clinical Laboratory Sciences, University of Cape Town, Cape Town, South Africa
    BMC Bioinformatics 12:29. 2011
    ..We suspect that the presence of paralogs affects the ability of GSA methods to accurately identify the most important sets of genes for subsequent research...