Antonio Jimeno-Yepes

Summary

Affiliation: Wellcome Trust Genome Campus
Country: UK

Publications

  1. doi request reprint Exploitation of ontological resources for scientific literature analysis: searching genes and related diseases
    Antonio Jimeno-Yepes
    European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, U K
    Conf Proc IEEE Eng Med Biol Soc 2009:7073-8. 2009
  2. pmc Assessment of disease named entity recognition on a corpus of annotated sentences
    Antonio Jimeno
    European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK
    BMC Bioinformatics 9:S3. 2008
  3. pmc Reuse of terminological resources for efficient ontological engineering in Life Sciences
    Antonio Jimeno-Yepes
    European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK
    BMC Bioinformatics 10:S4. 2009
  4. doi request reprint Measuring prediction capacity of individual verbs for the identification of protein interactions
    Dietrich Rebholz-Schuhmann
    European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB101SD, UK
    J Biomed Inform 43:200-7. 2010
  5. pmc PCorral--interactive mining of protein interactions from MEDLINE
    Chen Li
    European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK
    Database (Oxford) 2013:bat030. 2013
  6. pmc Annotation of protein residues based on a literature analysis: cross-validation against UniProtKb
    Kevin Nagel
    European Bioinformatics Institute, Hinxton, Cambridge, UK
    BMC Bioinformatics 10:S4. 2009

Collaborators

  • Harald Kirsch
  • Kevin Nagel
  • Dietrich Rebholz-Schuhmann
  • Chen Li
  • Miguel Arregui
  • Antonio Jimeno
  • Vivian Lee
  • Rafael Berlanga
  • Ernesto Jimenez-Ruiz
  • Sylvain Gaudan

Detail Information

Publications6

  1. doi request reprint Exploitation of ontological resources for scientific literature analysis: searching genes and related diseases
    Antonio Jimeno-Yepes
    European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, U K
    Conf Proc IEEE Eng Med Biol Soc 2009:7073-8. 2009
    ..For knowledge discovery (KD) solutions the identified concepts in the scientific literature are used to relate entities to each other, e.g. to identify gene-disease relations based on shared molecular functions...
  2. pmc Assessment of disease named entity recognition on a corpus of annotated sentences
    Antonio Jimeno
    European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK
    BMC Bioinformatics 9:S3. 2008
    ....
  3. pmc Reuse of terminological resources for efficient ontological engineering in Life Sciences
    Antonio Jimeno-Yepes
    European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK
    BMC Bioinformatics 10:S4. 2009
    ..As a result, we have created a reference thesaurus for this project, named HeCTh...
  4. doi request reprint Measuring prediction capacity of individual verbs for the identification of protein interactions
    Dietrich Rebholz-Schuhmann
    European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB101SD, UK
    J Biomed Inform 43:200-7. 2010
    ..Programmatic access to the text processing modules is available online (www.ebi.ac.uk/webservices/whatizit/info.jsf) and the full analysis of Medline abstracts will be made through the Web pages of the Rebholz group...
  5. pmc PCorral--interactive mining of protein interactions from MEDLINE
    Chen Li
    European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK
    Database (Oxford) 2013:bat030. 2013
    ..Altogether, PCorral serves curator at both the beginning and the end of the curation workflow for information retrieval and information extraction. Database URL: http://www.ebi.ac.uk/Rebholz-srv/pcorral...
  6. pmc Annotation of protein residues based on a literature analysis: cross-validation against UniProtKb
    Kevin Nagel
    European Bioinformatics Institute, Hinxton, Cambridge, UK
    BMC Bioinformatics 10:S4. 2009
    ..However, these methods were limited to point mutation extraction and do not extract features for the annotation of proteins at the residue level...