Jonathon Blake

Summary

Affiliation: Wellcome Trust Genome Campus
Country: UK

Publications

  1. ncbi request reprint ChroCoLoc: an application for calculating the probability of co-localization of microarray gene expression
    Jonathon Blake
    EMBL Meyerhofstr 1 D 69117 Heidelberg, Germany
    Bioinformatics 22:765-7. 2006
  2. ncbi request reprint Embryonic stem cell-like features of testicular carcinoma in situ revealed by genome-wide gene expression profiling
    Kristian Almstrup
    University Department of Growth and Reproduction, Rigshospitalet, Section GR 5064, Blegdamsvej 9, DK 2100 Copenhagen, Denmark
    Cancer Res 64:4736-43. 2004
  3. ncbi request reprint Bloader--a batch loader application for MIAMExpress
    Christian Schwager
    EMBL, Meyerhofstrasse 1, 67117 Heidelberg, Germany
    Bioinformatics 21:1727-9. 2005
  4. ncbi request reprint Molecular evidence for stem cell function of the slow-dividing fraction among human hematopoietic progenitor cells by genome-wide analysis
    Wolfgang Wagner
    Department of Medicine V, University of Heidelberg, Heidelberg, Germany
    Blood 104:675-86. 2004
  5. ncbi request reprint Hematopoietic progenitor cells and cellular microenvironment: behavioral and molecular changes upon interaction
    Wolfgang Wagner
    Department of Medicine V, University of Heidelberg, Im Neuenheimer Feld 410, 69120 Heidelberg, Germany
    Stem Cells 23:1180-91. 2005
  6. ncbi request reprint Retroviral integration sites correlate with expressed genes in hematopoietic stem cells
    Wolfgang Wagner
    Department of Internal Medicine V, University of Heidelberg, Im Neuenheimer Feld 410, 69120 Heidelberg, Germany
    Stem Cells 23:1050-8. 2005
  7. ncbi request reprint Comparative characteristics of mesenchymal stem cells from human bone marrow, adipose tissue, and umbilical cord blood
    Wolfgang Wagner
    Department of Medicine V, University of Heidelberg, Heidelberg, Germany
    Exp Hematol 33:1402-16. 2005
  8. ncbi request reprint Transcriptome profiling of estrogen-regulated genes in human primary osteoblasts reveals an osteoblast-specific regulation of the insulin-like growth factor binding protein 4 gene
    Stefanie Denger
    European Molecular Biology Laboratory, Meyerhofstrasse 1, 69117 Heidelberg, Germany
    Mol Endocrinol 22:361-79. 2008
  9. pmc Replicative senescence of mesenchymal stem cells: a continuous and organized process
    Wolfgang Wagner
    Department of Medicine V, University of Heidelberg, Heidelberg, Germany
    PLoS ONE 3:e2213. 2008

Detail Information

Publications9

  1. ncbi request reprint ChroCoLoc: an application for calculating the probability of co-localization of microarray gene expression
    Jonathon Blake
    EMBL Meyerhofstr 1 D 69117 Heidelberg, Germany
    Bioinformatics 22:765-7. 2006
    ..Chromosome Co-Localization probability calculator (ChroCoLoc) is a publicly available web-based tool for the analysis of co-localization of co-expressed genes identified by microarray experiments...
  2. ncbi request reprint Embryonic stem cell-like features of testicular carcinoma in situ revealed by genome-wide gene expression profiling
    Kristian Almstrup
    University Department of Growth and Reproduction, Rigshospitalet, Section GR 5064, Blegdamsvej 9, DK 2100 Copenhagen, Denmark
    Cancer Res 64:4736-43. 2004
    ..Finally, some of the highly expressed genes identified in this study are promising candidates for new diagnostic markers for CIS and/or TGCTs...
  3. ncbi request reprint Bloader--a batch loader application for MIAMExpress
    Christian Schwager
    EMBL, Meyerhofstrasse 1, 67117 Heidelberg, Germany
    Bioinformatics 21:1727-9. 2005
    ..A set of nested spreadsheets is used to collect the required MIAME annotation. Controlled vocabularies are downloaded from MIAMExpress and ArrayExpress databases to guarantee MIAME compliance...
  4. ncbi request reprint Molecular evidence for stem cell function of the slow-dividing fraction among human hematopoietic progenitor cells by genome-wide analysis
    Wolfgang Wagner
    Department of Medicine V, University of Heidelberg, Heidelberg, Germany
    Blood 104:675-86. 2004
    ..The majority of cells in the SDF are rhodamine-123dull. These results provide molecular evidence that the SDF is associated with primitive function and serves as basis for a detailed understanding of asymmetric division of stem cells...
  5. ncbi request reprint Hematopoietic progenitor cells and cellular microenvironment: behavioral and molecular changes upon interaction
    Wolfgang Wagner
    Department of Medicine V, University of Heidelberg, Im Neuenheimer Feld 410, 69120 Heidelberg, Germany
    Stem Cells 23:1180-91. 2005
    ....
  6. ncbi request reprint Retroviral integration sites correlate with expressed genes in hematopoietic stem cells
    Wolfgang Wagner
    Department of Internal Medicine V, University of Heidelberg, Im Neuenheimer Feld 410, 69120 Heidelberg, Germany
    Stem Cells 23:1050-8. 2005
    ..The association of gene expression and retrovirally targeted genes observed here will help to elucidate the molecular characteristics of primitive repopulating hematopoietic cells...
  7. ncbi request reprint Comparative characteristics of mesenchymal stem cells from human bone marrow, adipose tissue, and umbilical cord blood
    Wolfgang Wagner
    Department of Medicine V, University of Heidelberg, Heidelberg, Germany
    Exp Hematol 33:1402-16. 2005
    ..Whereas surface antigen markers have failed to precisely define this population, microarray analysis might provide a better tool for characterization of MSC...
  8. ncbi request reprint Transcriptome profiling of estrogen-regulated genes in human primary osteoblasts reveals an osteoblast-specific regulation of the insulin-like growth factor binding protein 4 gene
    Stefanie Denger
    European Molecular Biology Laboratory, Meyerhofstrasse 1, 69117 Heidelberg, Germany
    Mol Endocrinol 22:361-79. 2008
    ..Taken together, this analysis provides a comprehensive gene transcription profile and identifies several genes of potential physiological importance in controlling estrogen-mediated signaling in primary osteoblasts...
  9. pmc Replicative senescence of mesenchymal stem cells: a continuous and organized process
    Wolfgang Wagner
    Department of Medicine V, University of Heidelberg, Heidelberg, Germany
    PLoS ONE 3:e2213. 2008
    ..This process includes far reaching alterations in phenotype, differentiation potential, global gene expression patterns, and miRNA profiles that need to be considered for therapeutic application of MSC preparations...