R A Laskowski

Summary

Affiliation: University College London
Country: UK

Publications

  1. ncbi SURFNET: a program for visualizing molecular surfaces, cavities, and intermolecular interactions
    R A Laskowski
    Department of Biochemistry and Molecular Biology, University College, London, England
    J Mol Graph 13:323-30, 307-8. 1995
  2. ncbi AQUA and PROCHECK-NMR: programs for checking the quality of protein structures solved by NMR
    R A Laskowski
    Department of Biochemistry and Molecular Biology, University College London, UK
    J Biomol NMR 8:477-86. 1996
  3. ncbi On the molecular discrimination between adenine and guanine by proteins
    I Nobeli
    Department of Biochemistry and Molecular Biology, University College, Gower Street, London WC1E 6BT, UK
    Nucleic Acids Res 29:4294-309. 2001
  4. ncbi Validation of protein models derived from experiment
    R A Laskowski
    Department of Crystallography, Birkbeck College, University of London, UK
    Curr Opin Struct Biol 8:631-9. 1998
  5. ncbi PDBsum: summaries and analyses of PDB structures
    R A Laskowski
    Department of Crystallography, Birkbeck College, University of London, Malet Street, London WC1E 7HX, UK
    Nucleic Acids Res 29:221-2. 2001
  6. ncbi Non-randomness in side-chain packing: the distribution of interplanar angles
    J B Mitchell
    Department of Biochemistry and Molecular Biology, University College London, United Kingdom
    Proteins 29:370-80. 1997
  7. ncbi Amino acid-base interactions: a three-dimensional analysis of protein-DNA interactions at an atomic level
    N M Luscombe
    Biomolecular Structures and Modelling Unit, Department of Biochemistry and Molecular Biology, University College, Gower Street, London WC1E 6BT, UK
    Nucleic Acids Res 29:2860-74. 2001

Detail Information

Publications7

  1. ncbi SURFNET: a program for visualizing molecular surfaces, cavities, and intermolecular interactions
    R A Laskowski
    Department of Biochemistry and Molecular Biology, University College, London, England
    J Mol Graph 13:323-30, 307-8. 1995
    ..In addition, PostScript output is available, and the generated surfaces can be rendered using various other graphics packages...
  2. ncbi AQUA and PROCHECK-NMR: programs for checking the quality of protein structures solved by NMR
    R A Laskowski
    Department of Biochemistry and Molecular Biology, University College London, UK
    J Biomol NMR 8:477-86. 1996
    ..They are intended to be of use both to support ongoing NMR structure determination and in the validation of the final results...
  3. ncbi On the molecular discrimination between adenine and guanine by proteins
    I Nobeli
    Department of Biochemistry and Molecular Biology, University College, Gower Street, London WC1E 6BT, UK
    Nucleic Acids Res 29:4294-309. 2001
    ..Furthermore, an analysis of the conservation of residues in the protein chains binding guanine shows that residues in contact with the base are in general better conserved than the rest of the chain...
  4. ncbi Validation of protein models derived from experiment
    R A Laskowski
    Department of Crystallography, Birkbeck College, University of London, UK
    Curr Opin Struct Biol 8:631-9. 1998
    ..In NMR spectroscopy, a measure analogous to the crystallographic R-factor has been developed...
  5. ncbi PDBsum: summaries and analyses of PDB structures
    R A Laskowski
    Department of Crystallography, Birkbeck College, University of London, Malet Street, London WC1E 7HX, UK
    Nucleic Acids Res 29:221-2. 2001
    ..Numerous links take the user to related sites. PDBsum is updated whenever any new structures are released by the PDB and is freely accessible via http://www.biochem.ucl.ac.uk/bsm/pdbsum...
  6. ncbi Non-randomness in side-chain packing: the distribution of interplanar angles
    J B Mitchell
    Department of Biochemistry and Molecular Biology, University College London, United Kingdom
    Proteins 29:370-80. 1997
    ..In other cases, the observed distributions reflect the longer range effects of different possible interaction geometries. In particular, geometries that disrupt external hydrogen bonding are disfavored...
  7. ncbi Amino acid-base interactions: a three-dimensional analysis of protein-DNA interactions at an atomic level
    N M Luscombe
    Biomolecular Structures and Modelling Unit, Department of Biochemistry and Molecular Biology, University College, Gower Street, London WC1E 6BT, UK
    Nucleic Acids Res 29:2860-74. 2001
    ..An interactive Web-based atlas of side chain-base contacts provides access to the collected data, including analyses and visualisation of the three-dimensional geometry of the interactions...