Research Topics
Genomes and Genes | Shareen H DoakSummaryAffiliation: University of Wales Country: UK Publications
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Publications
In vitro genotoxicity testing strategy for nanomaterials and the adaptation of current OECD guidelinesS H Doak
Institute of Life Science, College of Medicine, Swansea University, Singleton Park, Swansea SA2 8PP, Wales, UK
Mutat Res 745:104-11. 2012....
No-observed effect levels are associated with up-regulation of MGMT following MMS exposureShareen H Doak
Institute of Life Science, School of Medicine, Swansea University, Singleton Park, Swansea, Wales, UK
Mutat Res 648:9-14. 2008....
Bone morphogenic factor gene dosage abnormalities in prostatic intraepithelial neoplasia and prostate cancerShareen H Doak
School of Medicine, University of Wales Swansea, Singleton Park, Swansea SA2 8PP, Wales, UK
Cancer Genet Cytogenet 176:161-5. 2007..Approximately half of the prostate tumors displayed increased copy numbers of the BMP2, BMP5, BMP7, and UC28 gene loci, which may account for their abnormal gene expression patterns in neoplastic prostate tissue...
High-resolution imaging using a novel atomic force microscope and confocal laser scanning microscope hybrid instrument: essential sample preparation aspectsShareen H Doak
School of Medicine, Institute of Life Science, Swansea University, Singleton Park, Swansea, SA2 8PP, Wales, UK
Histochem Cell Biol 130:909-16. 2008....
Mechanistic influences for mutation induction curves after exposure to DNA-reactive carcinogensShareen H Doak
School of Medicine, University of Wales Swansea, Singleton Park, Swansea, Wales, United Kingdom
Cancer Res 67:3904-11. 2007..A pragmatic threshold for carcinogenicity may therefore exist for such genotoxins...
Confounding experimental considerations in nanogenotoxicologyS H Doak
Institute of Life Science, Swansea University, Wales, UK
Mutagenesis 24:285-93. 2009..Thus, highlighting some of the potential confounding factors that need to be considered in order to ensure that in vitro genotoxicity assays report true biological impacts in response to nanomaterial exposure...
Generation of locus-specific probes for interphase fluorescence in situ hybridisation--application in Barrett's esophagusS H Doak
Human Molecular Pathology Group, School of Biological Sciences, University of Wales Swansea, Swansea, SA2 8PP, UK
Exp Mol Pathol 77:26-33. 2004..No significant alterations at the DNMT1 and DNMT3a loci were detected. An increased copy number of these genes is therefore not the basis for the hypermethylation commonly observed in this premalignant lesion...
Differential expression of the MAD2, BUB1 and HSP27 genes in Barrett's oesophagus-their association with aneuploidy and neoplastic progressionShareen H Doak
Human Molecular Pathology Group, School of Biological Sciences, University of Wales Swansea, Singleton Park, Swansea SA2 8PP, UK
Mutat Res 547:133-44. 2004..HSP27 transcriptional patterns therefore present potential as a prognostic tool to predict the aggressiveness of oesophageal adenocarcinomas (OA)...
Real-time reverse-transcription polymerase chain reaction: technical considerations for gene expression analysisShareen H Doak
DNA Damage Research Group, Institute of Life Science, College of Medicine, Swansea University, Swansea, Wales, UK
Methods Mol Biol 817:251-70. 2012....
Aneuploidy in upper gastro-intestinal tract cancers--a potential prognostic marker?Shareen H Doak
Institute of Life Science, School of Medicine, Swansea University, Singleton Park, Swansea SA2 8PP, Wales, UK
Mutat Res 651:93-104. 2008....
Pro-oxidant induced DNA damage in human lymphoblastoid cells: homeostatic mechanisms of genotoxic toleranceAnna L Seager
DNA Damage Research Group, Institute of Life Science, College of Medicine, Swansea University, SA2 8PP, UK
Toxicol Sci 128:387-97. 2012..Hence, observed pro- oxidant thresholds were due to protective capacities of base excision repair enzymes and antioxidants against DNA damage, highlighting the importance of homeostatic mechanisms in "genotoxic tolerance."..
Dextran coated ultrafine superparamagnetic iron oxide nanoparticles: compatibility with common fluorometric and colorimetric dyesSioned M Griffiths
Institute of Life Science, School of Medicine, Swansea University, Singleton Park, Swansea SA2 8PP, Wales, UK
Anal Chem 83:3778-85. 2011....
Analysis of the premalignant stages of Barrett's oesophagus through to adenocarcinoma by comparative genomic hybridizationJeanette Croft
Human Molecular Pathology Group, Swansea Clinical School, University of Wales, UK
Eur J Gastroenterol Hepatol 14:1179-86. 2002..Specific chromosome changes (4 and 8q) may represent important regions on which to focus attention in future studies, with a view to identifying diagnostic markers...
The role of iron redox state in the genotoxicity of ultrafine superparamagnetic iron oxide nanoparticlesNeenu Singh
Institute of Life Science, College of Medicine, Swansea University, Singleton Park, Swansea SA2 8PP, Wales, UK
Biomaterials 33:163-70. 2012..As human exposure to ferrofluids is predicted to increase through nanomedicine based therapeutics, these findings are important in guiding the fabrication of USPION to ensure they have characteristics that support biocompatibility...
N-methylpurine DNA glycosylase plays a pivotal role in the threshold response of ethyl methanesulfonate-induced chromosome damageZoulikha M Zaïr
Institute of Life Science, Swansea University, Swansea, SA2 8PP, UK
Toxicol Sci 119:346-58. 2011....
NanoGenotoxicology: the DNA damaging potential of engineered nanomaterialsNeenu Singh
Institute of Life Science, School of Medicine, Swansea University, Singleton Park, Swansea SA2 8PP, Wales, UK
Biomaterials 30:3891-914. 2009..Hence, areas that require that further attention are highlighted and recommendations to improve our understanding of the genotoxic potential of engineered nanomaterials are addressed...
Genotoxic thresholds, DNA repair, and susceptibility in human populationsGareth J S Jenkins
Institute of Life Science, Swansea School of Medicine, Swansea University, Singleton Park, Swansea SA28PP, United Kingdom
Toxicology 278:305-10. 2010..By studying polymorphisms in DNA repair genes, susceptible individuals may be identified, and additional safety factors appropriately targeted to these populations...
Non-linear dose-response of DNA-reactive genotoxins: recommendations for data analysisGeorge E Johnson
DNA Damage Group, School of Medicine, Swansea University, Wales, UK
Mutat Res 678:95-100. 2009..In this report, we will discuss the approaches that were taken to investigate potential threshold dose-response curves for DNA-reactive genotoxic compounds, with recommendations for further studies...
Genetic pathways involved in the progression of Barrett's metaplasia to adenocarcinomaG J S Jenkins
Human Molecular Pathology Group, Swansea Clinical School, University of Wales Swansea, UK
Br J Surg 89:824-37. 2002..The prediction of which patients with Barrett's metaplasia will develop cancer is difficult. Better genetic characterization of the condition may aid clinicians in devising more effective management and follow-up strategies...
Chromosome 4 hyperploidy represents an early genetic aberration in premalignant Barrett's oesophagusS H Doak
Human Molecular Pathology Group, School of Biological Sciences, University of Wales, Swansea SA2 8PP, UK
Gut 52:623-8. 2003..In an attempt to understand these causative pathways, fluorescence in situ hybridisation (FISH) was used in this study to determine when specific genetic alterations arise during Barrett's associated neoplastic progression...
Early p53 mutations in nondysplastic Barrett's tissue detected by the restriction site mutation (RSM) methodologyG J S Jenkins
Swansea Clinical School, University of Wales Swansea, UK
Br J Cancer 88:1271-6. 2003..4) and low-grade dysplasia patients (P=0.33) and 45% of high-grade dysplasia patients (P=0.15). Detected p53 mutations were mainly GC to AT transitions at CpG sites...
Characterisation of p53 status at the gene, chromosomal and protein levels in oesophageal adenocarcinomaS H Doak
Human Molecular Pathology Group, School of Biological Sciences, University of Wales, Swansea SA2 8PP, UK
Br J Cancer 89:1729-35. 2003..P53 gene mutations are not the primary cause of protein overexpression--an alternative mechanism is responsible for the positive p53 immunohistochemistry detected...
The bile acid deoxycholic acid (DCA) at neutral pH activates NF-kappaB and induces IL-8 expression in oesophageal cells in vitroG J S Jenkins
Swansea Clinical School, University of Wales Swansea, Swansea, Wales, UK
Carcinogenesis 25:317-23. 2004..Hence chromosome 4 amplification may provide a survival mechanism for bile exposed oesophageal tissues via NF-kappaB...
Single-walled carbon nanotubes: differential genotoxic potential associated with physico-chemical propertiesBella B Manshian
Institute of Life Science, School of Medicine, Swansea University, Singleton Park, Swansea, UK
Nanotoxicology 7:144-56. 2013..Consequently, this study has demonstrated that SWCNT genotoxicity is dependent on its secondary structure under experimental conditions and oxidative stress alone cannot account for the observed damage...
Influence of DNA repair on nonlinear dose-responses for mutationAdam D Thomas
Institute of Life Science, College of Medicine, Swansea University, SA2 8PP, UK
Toxicol Sci 132:87-95. 2013..Inactivation of MGMT sensitizes cells to MNU-induced mutagenesis and shifts the NOGEL to the left on the dose axis...
Quantum dots for multiplexed detection and characterisation of prostate cancer cells using a scanning near-field optical microscopeKelly Ann D Walker
College of Engineering, Multidisciplinary Nanotechnology Centre, Swansea University, Singleton Park, Swansea, United Kingdom
PLoS ONE 7:e31592. 2012....
Vinblastine and diethylstilboestrol tested in the in vitro mammalian cell micronucleus test (MNvit) at Swansea University UK in support of OECD draft Test Guideline 487George E Johnson
DNA Damage Group, Institute of Life Science, School of Medicine, Swansea University, Swansea, United Kingdom
Mutat Res 702:189-92. 2010..In the cytokinesis blocked micronucleus assay, replicative index and cytokinesis block proliferation index were suitable cell death and cytostasis measures...
Fluorescence imaging and investigations of directly labelled chromosomes using scanning near-field optical microscopyRichard M Baylis
Multidisciplinary Nanotechnology Centre, Department of Physics, Swansea University, Singleton Park, Swansea SA2 8PP, UK
Ultramicroscopy 107:308-12. 2007..The results are discussed in the context of developing locus specific direct tags together with high resolution SNOM imaging for the observation of chromosome aberrations...
Do dose response thresholds exist for genotoxic alkylating agents?G J S Jenkins
Swansea School of Medicine, Swansea University, Singleton Park, Swansea SA2 8PP and School of Biological Sciences, University of Wales, Swansea, UK
Mutagenesis 20:389-98. 2005..Finally, genotoxic thresholds are currently being described for acute exposures to single agents in vitro, however, dose response data for chronic exposures to complex mixtures are, as yet, a long way off...
Comparative genomic hybridization (CGH) of augmentation cystoplastiesTimson C Appanna
Department of Urology, University Hospital of Wales, Cardiff, UK
Int J Urol 14:539-44. 2007....
