Caroline Colijn

Summary

Affiliation: University of Bristol
Country: UK

Publications

  1. pmc Analysis of complex metabolic behavior through pathway decomposition
    Kuhn Ip
    Phenomics and Bioinformatics Research Centre, University of South Australia, Mawson Lakes, SA 5095, Australia
    BMC Syst Biol 5:91. 2011
  2. pmc Interpreting expression data with metabolic flux models: predicting Mycobacterium tuberculosis mycolic acid production
    Caroline Colijn
    Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America
    PLoS Comput Biol 5:e1000489. 2009
  3. pmc Inferring carbon sources from gene expression profiles using metabolic flux models
    Aaron Brandes
    Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America
    PLoS ONE 7:e36947. 2012

Collaborators

Detail Information

Publications3

  1. pmc Analysis of complex metabolic behavior through pathway decomposition
    Kuhn Ip
    Phenomics and Bioinformatics Research Centre, University of South Australia, Mawson Lakes, SA 5095, Australia
    BMC Syst Biol 5:91. 2011
    ....
  2. pmc Interpreting expression data with metabolic flux models: predicting Mycobacterium tuberculosis mycolic acid production
    Caroline Colijn
    Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America
    PLoS Comput Biol 5:e1000489. 2009
    ..Our method also predicts a number of additional potential modulators of TB mycolic acid biosynthesis. E-Flux thus provides a promising new approach for algorithmically predicting metabolic state from gene expression data...
  3. pmc Inferring carbon sources from gene expression profiles using metabolic flux models
    Aaron Brandes
    Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America
    PLoS ONE 7:e36947. 2012
    ..Our method prioritizes a list of candidate carbon sources for their compatibility with a gene expression profile using the framework of flux balance analysis to model the organism's metabolic network...