Research Topics
Genomes and GenesSpecies | Patrick F ChinnerySummaryAffiliation: University of Newcastle Country: UK Publications
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Publications
Epigenetics, epidemiology and mitochondrial DNA diseasesPatrick F Chinnery
Institute of Genetic Medicine, Newcastle University, Newcastle upon Tyne NE1 3BZ, UK
Int J Epidemiol 41:177-87. 2012..These observations open the door to future studies investigating the role of mtDNA methylation in human disease...
Variation in MAPT is not a contributing factor to the incomplete penetrance in LHONGavin Hudson
Institute for Human Genetics, Newcastle University, Newcastle upon Tyne, UK
Mitochondrion 11:620-2. 2011..Our findings suggest that genetic variation in MAPT is unlikely to make a major contribution to the risk of blindness among LHON mutation carriers...
POLG mutations cause decreased mitochondrial DNA repopulation rates following induced depletion in human fibroblastsJoanna D Stewart
Mitochondrial Research Group, Institute of Human Genetics, Newcastle University, Central Parkway, Newcastle upon Tyne, NE1 3BZ, UK
Biochim Biophys Acta 1812:321-5. 2011....
Adult-onset spinocerebellar ataxia syndromes due to MTATP6 mutationsGerald Pfeffer
Institute of Genetic Medicine, Central Parkway, Newcastle, UK
J Neurol Neurosurg Psychiatry 83:883-6. 2012..The authors report two families with onset of ataxia in adulthood (with pyramidal dysfunction and/or peripheral neuropathy variably present), who are clinically indistinguishable from other spinocerebellar ataxia patients...
Pathogenic mitochondrial DNA mutations are common in the general populationHannah R Elliott
Mitochondrial Research Group, Newcastle University, Newcastle upon Tyne, UK
Am J Hum Genet 83:254-60. 2008..The exclusive detection of m.14484T-->C on haplogroup J implicates the background mtDNA haplotype in mutagenesis. These findings emphasize the importance of developing new approaches to prevent transmission...
Variation in OPA1 does not explain the incomplete penetrance of Leber hereditary optic neuropathyGavin Hudson
Institute for Human Genetics, Newcastle University, Newcastle upon Tyne, UK
Mol Vis 16:2760-4. 2010....
What is influencing the phenotype of the common homozygous polymerase-γ mutation p.Ala467Thr?Vivienne C M Neeve
Institute of Genetic Medicine, Newcastle University, Central Parkway, Newcastle upon Tyne NE1 3BZ, UK
Brain 135:3614-26. 2012..Our results suggest that the mitochondrial DNA background plays an important role in modifying the disease phenotype but nuclear modifiers, epigenetic and environmental factors may also influence the severity of disease...
The prevalence and natural history of dominant optic atrophy due to OPA1 mutationsPatrick Yu-Wai-Man
Mitochondrial Research Group, Institute for Ageing and Health, The Medical School, Newcastle University, UK
Ophthalmology 117:1538-46, 1546.e1. 2010..To define the prevalence and natural history of this optic nerve disorder, we performed a population-based epidemiologic and molecular study of presumed DOA cases in the north of England...
Adult-onset cerebellar ataxia due to mutations in CABC1/ADCK3Rita Horvath
Institute of Genetic Medicine, Newcastle University, Central Parkway, Newcastle upon Tyne NE1 3BZ, UK
J Neurol Neurosurg Psychiatry 83:174-8. 2012..Inherited ataxias are heterogeneous disorders affecting both children and adults. The primary cause can be identified in about half of the patients and only very few can receive causative therapy...
Genetic variations within the OPA1 gene are not associated with neuromyelitis opticaKamil S Sitarz
Mitochondrial Research Group, Institute of Genetic Medicine, Newcastle University, UK
Mult Scler 18:240-3. 2012..We therefore screened for OPA1 in 32 patients with NMO. No pathogenic mutations were found, and none of the 13 single-nucleotide polymorphisms identified were associated with an increased risk of developing NMO...
Molecular basis of infantile reversible cytochrome c oxidase deficiency myopathyRita Horvath
Mitochondrial Research Group, Institute for Ageing and Health, The Medical School, Newcastle University, Framlington Place, Newcastle upon Tyne, NE2 4HH, UK
Brain 132:3165-74. 2009..This study provides the rationale for a simple genetic test to identify infants with mitochondrial myopathy and good prognosis...
Universal heteroplasmy of human mitochondrial DNABrendan A I Payne
Wellcome Trust Centre for Mitochondrial Research, Institute of Genetic Medicine, Newcastle University, Newcastleupon Tyne NE1 3BZ, UK
Hum Mol Genet 22:384-90. 2013..Ostensibly de novo somatic mtDNA mutations, seen in mtDNA maintenance disorders and neurodegenerative disease and aging, will partly be due to the clonal expansion of low-level inherited variants...
A new phenotype of brain iron accumulation with dystonia, optic atrophy, and peripheral neuropathyRita Horvath
Institute of Genetic Medicine, Newcastle University, Newcastle upon Tyne, United Kingdom
Mov Disord 27:789-93. 2012..Neurodegeneration with brain iron accumulation is clinically and genetically heterogeneous because of mutations in at least 7 nuclear genes...
X-Inactivation patterns in females harboring mtDNA mutations that cause Leber hereditary optic neuropathyGavin Hudson
Mitochondrial Research Group, Newcastle University, UK
Mol Vis 13:2339-43. 2007..Small studies have failed to detect dramatic skewed X-inactivation in women transmitting LHON mutations. However, segregation analyses predicted skewing only in a proportion of women, which would not have been detected in these studies...
Genetic variation in the methylenetetrahydrofolate reductase gene, MTHFR, does not alter the risk of visual failure in Leber's hereditary optic neuropathyGavin Hudson
Mitochondrial Research Group, Institute of Ageing and Health, Newcastle University, Newcastle upon Tyne, UK
Mol Vis 15:870-5. 2009..Folate deficiency is known to cause bilateral optic neuropathy, and defects of folate metabolism have been associated with nonarteritic ischemic optic neuropathy...
Prominent sensorimotor neuropathy due to SACS mutations revealed by whole-exome sequencingAngela Pyle
Institute of Genetic Medicine, Newcastle University, Newcastle upon Tyne, England
Arch Neurol 69:1351-4. 2012..To determine the genetic basis of an unexplained multisystem neurological disorder affecting 2 siblings...
Titin mutation segregates with hereditary myopathy with early respiratory failureGerald Pfeffer
Institute of Genetic Medicine, Central Parkway, Newcastle, NE1 3BZ, UK
Brain 135:1695-713. 2012..With 363 exons, screening TTN presented a major challenge until recently. However, whole exome sequencing provides a reliable cost-effective approach, providing the gene of interest is adequately captured...
What causes mitochondrial DNA deletions in human cells?Kim J Krishnan
Mitochondrial Research Group, The Medical School, Newcastle University, Newcastle upon Tyne, NE2 4HH, UK
Nat Genet 40:275-9. 2008..This conclusion has important implications for prevention of mtDNA disease and, potentially, for our understanding of the aging process...
Disorders of the optic nerve in mitochondrial cytopathies: new ideas on pathogenesis and therapeutic targetsKamil S Sitarz
Wellcome Trust Centre for Mitochondrial Research, Institute of Genetic Medicine, Newcastle University, Newcastle, UK
Curr Neurol Neurosci Rep 12:308-17. 2012..There are currently limited treatments for these blinding ocular disorders and, ultimately, the aim is to translate these major advances into tangible benefits for patients and their families...
Mitochondrial DNA haplogroups and risk of transient ischaemic attack and ischaemic stroke: a genetic association studyPatrick F Chinnery
Mitochondrial Research Group, Institute for Ageing and Health and Institute of Human Genetics, Newcastle University, Newcastle upon Tyne, UK
Lancet Neurol 9:498-503. 2010..We investigated whether there is an association between mtDNA haplotypes and incidence of stroke...
The implications of mitochondrial DNA copy number regulation during embryogenesisPhillippa J Carling
Mitochondrial Research Group, Institute of Genetic Medicine, Newcastle University, Newcastle upon Tyne, UK
Mitochondrion 11:686-92. 2011..Here we review current understanding of the factors regulating the amount of mtDNA within cells and discuss the relevance of these findings to our understanding of the inheritance of mtDNA heteroplasmy...
Nuclear factors involved in mitochondrial translation cause a subgroup of combined respiratory chain deficiencyJohn P Kemp
Mitochondrial Research Group, Institute of Human Genetics, Newcastle University, Central Parkway, Newcastle upon Tyne NE1 3BZ, UK
Brain 134:183-95. 2011....
No evidence of an association between mitochondrial DNA variants and osteoarthritis in 7393 cases and 5122 controlsGavin Hudson
Institute of Genetic Medicine, Newcastle University, Newcastle upon Tyne, UK
Ann Rheum Dis 72:136-9. 2013..Initial studies implicate maternally inherited variants of mitochondrial DNA (mtDNA) in subgroups of patients with OA based on gender and specific joint involvement, but these findings have not been replicated...
Unique mitochondrial DNA in highly inbred feral cattleGavin Hudson
Institute of Genetic Medicine, Newcastle University, Newcastle upon Tyne, UK
Mitochondrion 12:438-40. 2012..Random population sampling of ~10% of the extant herd identified a single mtDNA haplotype harbouring a unique bovine variant present in all other higher mammals (m.11789C/Y421H) which may contribute to their survival...
A reduction of mitochondrial DNA molecules during embryogenesis explains the rapid segregation of genotypesLynsey M Cree
Mitochondrial Research Group, Newcastle University, Newcastle NE2 4HH, UK
Nat Genet 40:249-54. 2008....
Polymerase γ gene POLG determines the risk of sodium valproate-induced liver toxicityJoanna D Stewart
Mitochondrial Research Group, Institute of Human Genetics, Newcastle University, UK
Hepatology 52:1791-6. 2010..CONCLUSION: These findings implicate impaired liver regeneration in VPA toxicity and show that prospective genetic testing of POLG will identify individuals at high risk of this potentially fatal consequence of treatment...
Mitochondrial aging is accelerated by anti-retroviral therapy through the clonal expansion of mtDNA mutationsBrendan A I Payne
Mitochondrial Research Group, Institute of Genetic Medicine, Newcastle University, Newcastle upon Tyne, UK
Nat Genet 43:806-10. 2011..These observations add weight to the role of somatic mtDNA mutations in the aging process and raise the specter of progressive iatrogenic mitochondrial genetic disease emerging over the next decade...
Mitochondrial optic neuropathies - disease mechanisms and therapeutic strategiesPatrick Yu-Wai-Man
Mitochondrial Research Group, Institute for Ageing and Health, The Medical School, Newcastle University, UK
Prog Retin Eye Res 30:81-114. 2011..The ultimate goal is to translate these research advances into clinical practice and new treatment strategies are currently being investigated to improve the visual prognosis for patients with mitochondrial optic neuropathies...
Cardiomyopathy is common in patients with the mitochondrial DNA m.3243A>G mutation and correlates with mutation loadKieren G Hollingsworth
Newcastle Magnetic Resonance Centre, Institute of Cellular Medicine, Newcastle University, Campus for Ageing and Vitality, NE4 5PL, UK
Neuromuscul Disord 22:592-6. 2012..3243A>G. The early detection of cardiac dysfunction with MRI opens up opportunities to prevent heart failure in these patients through early intervention...
Fall in circulating mononuclear cell mitochondrial DNA content in human sepsisAngela Pyle
Mitochondrial Research Group, Institute for Ageing and Health, The Medical School, Newcastle University, Framlington Place, Newcastle, NE2 4HH, UK
Intensive Care Med 36:956-62. 2010..We have investigated the cellular basis of the mtDNA depletion in sepsis, and determined clinical correlates with mtDNA depletion...
Adults with RRM2B-related mitochondrial disease have distinct clinical and molecular characteristicsRobert D S Pitceathly
MRC Centre for Neuromuscular Diseases, UCL Institute of Neurology and National Hospital for Neurology and Neurosurgery, Queen Square, London WC1N 3BG, UK
Brain 135:3392-403. 2012....
Treatment for mitochondrial disordersGerald Pfeffer
Institute of Genetic Medicine, Newcastle University, Newcastle upon Tyne, UK
Cochrane Database Syst Rev 4:CD004426. 2012..This major update was carried out to identify new studies and grade the original studies for potential bias in accordance with revised Cochrane Collaboration guidelines...
Mutation of OPA1 causes dominant optic atrophy with external ophthalmoplegia, ataxia, deafness and multiple mitochondrial DNA deletions: a novel disorder of mtDNA maintenanceGavin Hudson
Mitochondrial Research Group, School of Neurology, Neurobiology and Psychiatry, The Medical School, Newcastle University, Newcastle upon Tyne, NE2 4HH, UK
Brain 131:329-37. 2008..This demonstrates the importance of OPA1 in mtDNA maintenance, and implicates OPA1 in diseases associated with secondary defects of mtDNA...
155th ENMC workshop: polymerase gamma and disorders of mitochondrial DNA synthesis, 21-23 September 2007, Naarden, The NetherlandsPatrick F Chinnery
Mitochondrial Research Group and Institutes of Neuroscience and Human Genetics, The Medical School, Newcastle University, Framlington Place, Newcastle upon Tyne NE2 4HH, UK
Neuromuscul Disord 18:259-67. 2008
Prevalence of genetic muscle disease in Northern England: in-depth analysis of a muscle clinic populationFiona L M Norwood
Institute of Human Genetics, Newcastle University, Central Parkway, Newcastle upon Tyne NE1 3BZ, UK
Brain 132:3175-86. 2009..The study also illustrates the immense diagnostic progress since the first regional survey over 50 years ago by Walton and Nattrass...
A randomized placebo-controlled trial of idebenone in Leber's hereditary optic neuropathyThomas Klopstock
Institute of Genetic Medicine, Newcastle University, Central Parkway, Newcastle upon Tyne, NE1 3BZ, UK
Brain 134:2677-86. 2011....
Clinical expression of Leber hereditary optic neuropathy is affected by the mitochondrial DNA-haplogroup backgroundGavin Hudson
Mitochondrial Research Group, Department of Ophthalmology and Institute of Human Genetics, Newcastle University, Newcastle upon Tyne, NE2 4HH, UK
Am J Hum Genet 81:228-33. 2007..Substitutions on MTCYB provide an explanation for these findings, which demonstrate that common genetic variants have a marked effect on the expression of an ostensibly monogenic mtDNA disorder...
Diagnosis and treatment of mitochondrial myopathiesGerald Pfeffer
Institute of Genetic Medicine, Newcastle University, Newcastle NE13BZ, United Kingdom
Ann Med 45:4-16. 2013..Emphasis is placed on practical management considerations while including some recent updates in the field...
Normal levels of wild-type mitochondrial DNA maintain cytochrome c oxidase activity for two pathogenic mitochondrial DNA mutations but not for m.3243A-->GSteve E Durham
Mitochondrial Research Group, Newcastle University, Newcastle, UK
Am J Hum Genet 81:189-95. 2007....
A critical analysis of the combined usage of protein localization prediction methods: Increasing the number of independent data sets can reduce the accuracy of predicted mitochondrial localizationKieren T Lythgow
Institute of Human Genetics, Newcastle University, Central Parkway, Newcastle upon Tyne, NE1 3BZ, UK
Mitochondrion 11:444-9. 2011..This approach will help to accelerate the identification of new mitochondrial disease genes by providing a principled way for the selection for combination of appropriate prediction methods of mitochondrial localization of proteins...
Glucocerebrosidase mutations alter the endoplasmic reticulum and lysosomes in Lewy body diseaseMarzena Kurzawa-Akanbi
Medical Toxicology Centre, Wolfson Building, Newcastle University, Newcastle upon Tyne, UK
J Neurochem 123:298-309. 2012..The results indicate that mutation in GBA leads to additional lysosomal abnormalities, enhanced by an impaired UPR, potentially causing α-synuclein accumulation...
Mitochondrial myopathies: developments in treatmentAdam Hassani
Mitochondrial Research Group, Institute of Human Genetics, Newcastle University, Newcastle upon Tyne, UK
Curr Opin Neurol 23:459-65. 2010..Existing therapies continue to be evaluated and novel treatment strategies are starting to appear on the horizon...
NeuroferritinopathyJohn Burn
Institute of Human Genetics, Newcastle University, Newcastle on Tyne, UK
Semin Pediatr Neurol 13:176-81. 2006....
Mutations in SUCLA2: a tandem ride back to the Krebs cyclePatrick F Chinnery
Mitochondrial Research Group and Institute of Human Genetics, Newcastle University, The Medical School, Framlington Place, Newcastle upon Tyne NE2 4HH, UK
Brain 130:606-9. 2007
Neuroferritinopathy: a new inborn error of iron metabolismMichael J Keogh
Institute of Genetic Medicine, International Centre for Life, Newcastle University, Central Parkway, Newcastle upon Tyne, NE1 3BZ, UK
Neurogenetics 13:93-6. 2012..All three harbouring the pathogenic c.460InsA mutation showed iron deposition; these findings show pathological iron accumulation begins in early childhood which is of major importance in understanding and developing treatment for NBIA...
Current concepts and controversies in neurodegeneration with brain iron accumulationMichael J Keogh
Mitochondrial Research Group, Institute of Genetic Medicine, International Centre for Life, Newcastle University, Newcastle upon Tyne, UK
Semin Pediatr Neurol 19:51-6. 2012..Herein, we summarize current concepts of NBIA pathogenesis and discuss important gaps in current knowledge, outlining key questions in the field...
Vertigo and vestibular abnormalities in spinocerebellar ataxia type 6Patrick Yu-Wai-Man
Mitochondrial Research Group, School of Neurology, Neurobiology and Psychiatry, The Medical School, Newcastle University, Newcastle upon Tyne, NE2 4HH, UK
J Neurol 256:78-82. 2009..These findings demonstrate phenotypic overlap between SCA6 and episodic ataxia type 2, which are both due to mutations in CACNL1A4...
Distinct critical cerebellar subregions for components of verbal working memoryFreya E Cooper
Institute of Neuroscience, Newcastle University, UK
Neuropsychologia 50:189-97. 2012..The work confirms the involvement of the cerebellum in verbal working memory and defines specific subsystems for this within the cerebellum...
