Jochen BlumbergerSummaryAffiliation: University of Cambridge Country: UK Publications
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Free energies for biological electron transfer from QM/MM calculation: method, application and critical assessmentJochen Blumberger
Department of Chemistry, University of Cambridge, Cambridge, UK
Phys Chem Chem Phys 10:5651-67. 2008..Several modeling aspects which are important for successful calculation of free energies with QM/MM are discussed in detail...
Kinetics of the terminal electron transfer step in cytochrome c oxidaseVaromyalin Tipmanee
Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, United Kingdom
J Phys Chem B 116:1876-83. 2012..We show that our results are consistent with the weak temperature dependence observed in experiment if one allows for very minor variations in the donor-acceptor distance as the temperature changes...
Prediction of reorganization free energies for biological electron transfer: a comparative study of Ru-modified cytochromes and a 4-helix bundle proteinVaromyalin Tipmanee
Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, United Kingdom
J Am Chem Soc 132:17032-40. 2010..They suggest that reorganization free energy may in general not be effectively controlled by single point mutations, but to a large extent by the degree of solvent exposure of the ionizable cofactors...
Electronic coupling matrix elements from charge constrained density functional theory calculations using a plane wave basis setHarald Oberhofer
Department of Chemistry, University of Cambridge, Cambridge CB2 1EW, United Kingdom
J Chem Phys 133:244105. 2010..9 mH). The implementation presented opens up the possibility to compute electronic coupling matrix elements for extended systems where donor, acceptor, and the environment are treated at the quantum mechanical (QM) level...
