Sophie Bamps

Summary

Affiliation: University of Leeds
Country: UK

Publications

  1. pmc A genome-wide study of PDZ-domain interactions in C. elegans reveals a high frequency of non-canonical binding
    Nicolas Lenfant
    INSERM, U891, CRCM, Marseille, F 13009, France
    BMC Genomics 11:671. 2010
  2. pmc Escherichia coli MW005: lambda Red-mediated recombineering and copy-number induction of oriV-equipped constructs in a single host
    Marcel Westenberg
    Pharmaceutical Science Division, King s College London, 150 Stamford Street, London, SE1 9NH, UK
    BMC Biotechnol 10:27. 2010
  3. doi request reprint The Caenorhabditis elegans sirtuin gene, sir-2.1, is widely expressed and induced upon caloric restriction
    Sophie Bamps
    Institute of Integrative and Comparative Biology, Faculty of Biological Sciences, The University of Leeds, Woodhouse Lane, Leeds LS2 9JT, UK
    Mech Ageing Dev 130:762-70. 2009
  4. pmc The significance of alternative transcripts for Caenorhabditis elegans transcription factor genes, based on expression pattern analysis
    Hannah L Craig
    School of Biology, Faculty of Biological Sciences, The University of Leeds, Leeds LS2 9JT, UK
    BMC Genomics 14:249. 2013
  5. doi request reprint Large-scale gene expression pattern analysis, in situ, in Caenorhabditis elegans
    Sophie Bamps
    Institute of Integrative and Comparative Biology, Faculty of Biological Sciences, The University of Leeds, Leeds, LS2 9JT, UK
    Brief Funct Genomic Proteomic 7:175-83. 2008
  6. doi request reprint Distinct mechanisms for delimiting expression of four Caenorhabditis elegans transcription factor genes encoding activators or repressors
    Sophie Bamps
    Institute of Integrative and Comparative Biology, Faculty of Biological Sciences, The University of Leeds, Leeds LS2 9JT, UK
    Mol Genet Genomics 286:95-107. 2011

Collaborators

  • Ian A Hope
  • Colin T Dolphin
  • Hannah L Craig
  • Marcel Westenberg
  • Nicolas Lenfant
  • Julia Wirtz
  • Jean Paul Borg
  • Jolanta Polanowska
  • Shizue Omi
  • Jerome Reboul
  • Helen Soedling

Detail Information

Publications6

  1. pmc A genome-wide study of PDZ-domain interactions in C. elegans reveals a high frequency of non-canonical binding
    Nicolas Lenfant
    INSERM, U891, CRCM, Marseille, F 13009, France
    BMC Genomics 11:671. 2010
    ..We undertook a comprehensive search for protein partners of all individual PDZ domains in C. elegans to characterize their function and mode of interaction...
  2. pmc Escherichia coli MW005: lambda Red-mediated recombineering and copy-number induction of oriV-equipped constructs in a single host
    Marcel Westenberg
    Pharmaceutical Science Division, King s College London, 150 Stamford Street, London, SE1 9NH, UK
    BMC Biotechnol 10:27. 2010
    ..To eliminate these intervening DNA isolation and transformation steps we retrofitted EL350 with a PBAD-driven trfA gene generating strain MW005 that supports, independently, both recombineering and copy-number induction...
  3. doi request reprint The Caenorhabditis elegans sirtuin gene, sir-2.1, is widely expressed and induced upon caloric restriction
    Sophie Bamps
    Institute of Integrative and Comparative Biology, Faculty of Biological Sciences, The University of Leeds, Woodhouse Lane, Leeds LS2 9JT, UK
    Mech Ageing Dev 130:762-70. 2009
    ..1 leads to extension of lifespan and deletion of the gene shortens lifespan. The sir-2.1 gene, however, is located in an operon, an organization not taken into account in previous studies of this gene's expression...
  4. pmc The significance of alternative transcripts for Caenorhabditis elegans transcription factor genes, based on expression pattern analysis
    Hannah L Craig
    School of Biology, Faculty of Biological Sciences, The University of Leeds, Leeds LS2 9JT, UK
    BMC Genomics 14:249. 2013
    ..But it is unclear to what extent alternative transcripts from these genes may further increase the complexity of the transcription factor complement...
  5. doi request reprint Large-scale gene expression pattern analysis, in situ, in Caenorhabditis elegans
    Sophie Bamps
    Institute of Integrative and Comparative Biology, Faculty of Biological Sciences, The University of Leeds, Leeds, LS2 9JT, UK
    Brief Funct Genomic Proteomic 7:175-83. 2008
    ....
  6. doi request reprint Distinct mechanisms for delimiting expression of four Caenorhabditis elegans transcription factor genes encoding activators or repressors
    Sophie Bamps
    Institute of Integrative and Comparative Biology, Faculty of Biological Sciences, The University of Leeds, Leeds LS2 9JT, UK
    Mol Genet Genomics 286:95-107. 2011
    ..This leads to observations concerning the implications of these different mechanisms on stochastic noise in gene expression and the consequent significance for developmental decisions in general...