Research Topics
Species | B Markus LangeSummaryAffiliation: Syngenta Central Toxicology Laboratory Country: UK Publications
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Detail Information
Publications
Genome organization in Arabidopsis thaliana: a survey for genes involved in isoprenoid and chlorophyll metabolismB Markus Lange
Torrey Mesa Research Institute, Syngenta Research and Technology, 3115 Merryfield Row, San Diego, CA 92121, USA
Plant Mol Biol 51:925-48. 2003..The integration of all these datasets allows the generation of a knowledge-based metabolic map of isoprenoid metabolic pathways in A. thaliana and provides a substantial improvement of the currently available gene annotation...
Abscisic acid-induced modulation of metabolic and redox control pathways in Arabidopsis thalianaMajid Ghassemian
Torrey Mesa Research Institute, San Diego, CA 92121, USA
Phytochemistry 69:2899-911. 2008..Our results also indicate an intricate relationship, at the transcriptional and possibly post-transcriptional levels, between ABA biosynthesis, the xanthophyll cycle, and ascorbic acid recycling...- Integrative analysis of transcript and metabolite profiling data sets to evaluate the regulation of biochemical pathways during photomorphogenesisMajid Ghassemian
Torrey Mesa Research Institute, 3115 Merryfield Row, San Diego, CA 92121, USA
Arch Biochem Biophys 448:45-59. 2006..Our results illustrate the general importance of integrative approaches to correlate post-genomic data sets with phenotypic outcomes... - A draft sequence of the rice genome (Oryza sativa L. ssp. japonica)Stephen A Goff
Torrey Mesa Research Institute, Syngenta, 3115 Merryfield Row, San Diego, CA 92121, USA
Science 296:92-100. 2002..Assignment of candidate rice orthologs to Arabidopsis genes is possible in many cases. The rice genome sequence provides a foundation for the improvement of cereals, our most important crops... 
Proteomic survey of metabolic pathways in riceAntonius Koller
Protein and Metabolite Dynamics Department, Torrey Mesa Research Institute, 3115 Merryfield Row, San Diego, CA 92121, USA
Proc Natl Acad Sci U S A 99:11969-74. 2002..In addition, several previously characterized allergenic proteins were identified in the seed sample, indicating the potential of proteomic approaches to survey food samples with regard to the occurrence of allergens...- Metabolic cross talk between cytosolic and plastidial pathways of isoprenoid biosynthesis: unidirectional transport of intermediates across the chloroplast envelope membraneJulie Ann Bick
Torrey Mesa Research Institute, Syngenta Research and Technology, 3115 Merryfield Row, San Diego, CA 92121, USA
Arch Biochem Biophys 415:146-54. 2003.... - Comprehensive post-genomic data analysis approaches integrating biochemical pathway mapsB Markus Lange
Institute of Biological Chemistry and Center for Integrated Biotechnology, Washington State University, PO Box 646340, Pullman, WA 99164 6340, USA
Phytochemistry 66:413-51. 2005..thaliana that includes, in addition to accurate annotation, condensed experimental information regarding in vitro and in vivo gene/protein function... - A proposed framework for the description of plant metabolomics experiments and their resultsHelen Jenkins
Department of Computer Science, University of Wales, Penglais, Aberystwyth, Ceredigion, Wales, UK
Nat Biotechnol 22:1601-6. 2004..armet.org/). We seek to advance discussion and community adoption of a standard for metabolomics, which would promote principled collection, storage and transmission of experiment data... - Single-cell genomicsB Markus Lange
Institute of Biological Chemistry and Center for Integrated Biotechnology, Washington State University, PO Box 646340, Pullman, Washington 99164 6340, USA
Curr Opin Plant Biol 8:236-41. 2005.... - Counting the cost of a cold-blooded life: metabolomics of cold acclimationJohn Browse
Institute of Biological Chemistry, Washington State University, Pullman, WA 99164-6340, USA
Proc Natl Acad Sci U S A 101:14996-7. 2004 - Integrative analysis of metabolic networks: from peaks to flux models?B Markus Lange
Institute of Biological Chemistry and Center for Integrated Biotechnology, Washington State University, PO Box 646340, Pullman, WA 99164 6340, USA
Curr Opin Plant Biol 9:220-6. 2006..A convergence of traditional reductionistic and novel holistic experimental approaches could aid in elucidating flux control... - Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profilingAjin Mandaokar
Institute of Biological Chemistry, Washington State University, Pullman, Washington 99164 6340, USA
Plant J 46:984-1008. 2006..Together with the data from transcriptional profiling, these results indicate that MYB21 and MYB24 are induced by jasmonate and mediate important aspects of the jasmonate response during stamen development... - A systems biology approach identifies the biochemical mechanisms regulating monoterpenoid essential oil composition in peppermintRigoberto Rios-Estepa
Institute of Biological Chemistry, M J Murdock Metabolomics Laboratory, Center for Integrated Biotechnology, and School of Chemical Engineering and Bioengineering, Washington State University, Pullman, WA 99164 6340, USA
Proc Natl Acad Sci U S A 105:2818-23. 2008..These results illustrate the utility of iterative cycles of mathematical modeling and experimental testing to elucidate the mechanisms controlling flux through metabolic pathways... - Metabolite profiling of Calvin cycle intermediates by HPLC-MS using mixed-mode stationary phasesJeffrey A Cruz
Institute of Biological Chemistry, Washington State University, Pullman, P O 646340, Washington 99164 6340, USA
Plant J 55:1047-60. 2008..The broader applicability of our method is illustrated by profiling sugar phosphates extracted from the leaves of five taxonomically diverse plants... - Potential of metabolomics as a functional genomics toolRaoul J Bino
Plant Physiology Department, Wageningen University, Arboretumlaan 4, 6703 BD Wageningen, The Netherlands
Trends Plant Sci 9:418-25. 2004