B Markus Lange

Summary

Affiliation: Syngenta Central Toxicology Laboratory
Country: UK

Publications

  1. ncbi Genome organization in Arabidopsis thaliana: a survey for genes involved in isoprenoid and chlorophyll metabolism
    B Markus Lange
    Torrey Mesa Research Institute, Syngenta Research and Technology, 3115 Merryfield Row, San Diego, CA 92121, USA
    Plant Mol Biol 51:925-48. 2003
  2. doi Abscisic acid-induced modulation of metabolic and redox control pathways in Arabidopsis thaliana
    Majid Ghassemian
    Torrey Mesa Research Institute, San Diego, CA 92121, USA
    Phytochemistry 69:2899-911. 2008
  3. ncbi Integrative analysis of transcript and metabolite profiling data sets to evaluate the regulation of biochemical pathways during photomorphogenesis
    Majid Ghassemian
    Torrey Mesa Research Institute, 3115 Merryfield Row, San Diego, CA 92121, USA
    Arch Biochem Biophys 448:45-59. 2006
  4. ncbi A draft sequence of the rice genome (Oryza sativa L. ssp. japonica)
    Stephen A Goff
    Torrey Mesa Research Institute, Syngenta, 3115 Merryfield Row, San Diego, CA 92121, USA
    Science 296:92-100. 2002
  5. pmc Proteomic survey of metabolic pathways in rice
    Antonius Koller
    Protein and Metabolite Dynamics Department, Torrey Mesa Research Institute, 3115 Merryfield Row, San Diego, CA 92121, USA
    Proc Natl Acad Sci U S A 99:11969-74. 2002
  6. ncbi Metabolic cross talk between cytosolic and plastidial pathways of isoprenoid biosynthesis: unidirectional transport of intermediates across the chloroplast envelope membrane
    Julie Ann Bick
    Torrey Mesa Research Institute, Syngenta Research and Technology, 3115 Merryfield Row, San Diego, CA 92121, USA
    Arch Biochem Biophys 415:146-54. 2003
  7. ncbi Comprehensive post-genomic data analysis approaches integrating biochemical pathway maps
    B Markus Lange
    Institute of Biological Chemistry and Center for Integrated Biotechnology, Washington State University, PO Box 646340, Pullman, WA 99164 6340, USA
    Phytochemistry 66:413-51. 2005
  8. ncbi A proposed framework for the description of plant metabolomics experiments and their results
    Helen Jenkins
    Department of Computer Science, University of Wales, Penglais, Aberystwyth, Ceredigion, Wales, UK
    Nat Biotechnol 22:1601-6. 2004
  9. ncbi Single-cell genomics
    B Markus Lange
    Institute of Biological Chemistry and Center for Integrated Biotechnology, Washington State University, PO Box 646340, Pullman, Washington 99164 6340, USA
    Curr Opin Plant Biol 8:236-41. 2005
  10. pmc Counting the cost of a cold-blooded life: metabolomics of cold acclimation
    John Browse
    Institute of Biological Chemistry, Washington State University, Pullman, WA 99164 6340, USA
    Proc Natl Acad Sci U S A 101:14996-7. 2004

Collaborators

Detail Information

Publications15

  1. ncbi Genome organization in Arabidopsis thaliana: a survey for genes involved in isoprenoid and chlorophyll metabolism
    B Markus Lange
    Torrey Mesa Research Institute, Syngenta Research and Technology, 3115 Merryfield Row, San Diego, CA 92121, USA
    Plant Mol Biol 51:925-48. 2003
    ..The integration of all these datasets allows the generation of a knowledge-based metabolic map of isoprenoid metabolic pathways in A. thaliana and provides a substantial improvement of the currently available gene annotation...
  2. doi Abscisic acid-induced modulation of metabolic and redox control pathways in Arabidopsis thaliana
    Majid Ghassemian
    Torrey Mesa Research Institute, San Diego, CA 92121, USA
    Phytochemistry 69:2899-911. 2008
    ..Our results also indicate an intricate relationship, at the transcriptional and possibly post-transcriptional levels, between ABA biosynthesis, the xanthophyll cycle, and ascorbic acid recycling...
  3. ncbi Integrative analysis of transcript and metabolite profiling data sets to evaluate the regulation of biochemical pathways during photomorphogenesis
    Majid Ghassemian
    Torrey Mesa Research Institute, 3115 Merryfield Row, San Diego, CA 92121, USA
    Arch Biochem Biophys 448:45-59. 2006
    ..Our results illustrate the general importance of integrative approaches to correlate post-genomic data sets with phenotypic outcomes...
  4. ncbi A draft sequence of the rice genome (Oryza sativa L. ssp. japonica)
    Stephen A Goff
    Torrey Mesa Research Institute, Syngenta, 3115 Merryfield Row, San Diego, CA 92121, USA
    Science 296:92-100. 2002
    ..Assignment of candidate rice orthologs to Arabidopsis genes is possible in many cases. The rice genome sequence provides a foundation for the improvement of cereals, our most important crops...
  5. pmc Proteomic survey of metabolic pathways in rice
    Antonius Koller
    Protein and Metabolite Dynamics Department, Torrey Mesa Research Institute, 3115 Merryfield Row, San Diego, CA 92121, USA
    Proc Natl Acad Sci U S A 99:11969-74. 2002
    ..In addition, several previously characterized allergenic proteins were identified in the seed sample, indicating the potential of proteomic approaches to survey food samples with regard to the occurrence of allergens...
  6. ncbi Metabolic cross talk between cytosolic and plastidial pathways of isoprenoid biosynthesis: unidirectional transport of intermediates across the chloroplast envelope membrane
    Julie Ann Bick
    Torrey Mesa Research Institute, Syngenta Research and Technology, 3115 Merryfield Row, San Diego, CA 92121, USA
    Arch Biochem Biophys 415:146-54. 2003
    ....
  7. ncbi Comprehensive post-genomic data analysis approaches integrating biochemical pathway maps
    B Markus Lange
    Institute of Biological Chemistry and Center for Integrated Biotechnology, Washington State University, PO Box 646340, Pullman, WA 99164 6340, USA
    Phytochemistry 66:413-51. 2005
    ..thaliana that includes, in addition to accurate annotation, condensed experimental information regarding in vitro and in vivo gene/protein function...
  8. ncbi A proposed framework for the description of plant metabolomics experiments and their results
    Helen Jenkins
    Department of Computer Science, University of Wales, Penglais, Aberystwyth, Ceredigion, Wales, UK
    Nat Biotechnol 22:1601-6. 2004
    ..armet.org/). We seek to advance discussion and community adoption of a standard for metabolomics, which would promote principled collection, storage and transmission of experiment data...
  9. ncbi Single-cell genomics
    B Markus Lange
    Institute of Biological Chemistry and Center for Integrated Biotechnology, Washington State University, PO Box 646340, Pullman, Washington 99164 6340, USA
    Curr Opin Plant Biol 8:236-41. 2005
    ....
  10. pmc Counting the cost of a cold-blooded life: metabolomics of cold acclimation
    John Browse
    Institute of Biological Chemistry, Washington State University, Pullman, WA 99164 6340, USA
    Proc Natl Acad Sci U S A 101:14996-7. 2004
  11. ncbi Integrative analysis of metabolic networks: from peaks to flux models?
    B Markus Lange
    Institute of Biological Chemistry and Center for Integrated Biotechnology, Washington State University, PO Box 646340, Pullman, WA 99164 6340, USA
    Curr Opin Plant Biol 9:220-6. 2006
    ..A convergence of traditional reductionistic and novel holistic experimental approaches could aid in elucidating flux control...
  12. ncbi Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
    Ajin Mandaokar
    Institute of Biological Chemistry, Washington State University, Pullman, Washington 99164 6340, USA
    Plant J 46:984-1008. 2006
    ..Together with the data from transcriptional profiling, these results indicate that MYB21 and MYB24 are induced by jasmonate and mediate important aspects of the jasmonate response during stamen development...
  13. pmc A systems biology approach identifies the biochemical mechanisms regulating monoterpenoid essential oil composition in peppermint
    Rigoberto Rios-Estepa
    Institute of Biological Chemistry, M J Murdock Metabolomics Laboratory, Center for Integrated Biotechnology, and School of Chemical Engineering and Bioengineering, Washington State University, Pullman, WA 99164 6340, USA
    Proc Natl Acad Sci U S A 105:2818-23. 2008
    ..These results illustrate the utility of iterative cycles of mathematical modeling and experimental testing to elucidate the mechanisms controlling flux through metabolic pathways...
  14. doi Metabolite profiling of Calvin cycle intermediates by HPLC-MS using mixed-mode stationary phases
    Jeffrey A Cruz
    Institute of Biological Chemistry, Washington State University, Pullman, P O 646340, Washington 99164 6340, USA
    Plant J 55:1047-60. 2008
    ..The broader applicability of our method is illustrated by profiling sugar phosphates extracted from the leaves of five taxonomically diverse plants...
  15. ncbi Potential of metabolomics as a functional genomics tool
    Raoul J Bino
    Plant Physiology Department, Wageningen University, Arboretumlaan 4, 6703 BD Wageningen, The Netherlands
    Trends Plant Sci 9:418-25. 2004