Georgios V Gkoutos
Affiliation: National Institute for Medical Research
- EMPReSS: European mouse phenotyping resource for standardized screensEain C J Green
MRC Mammalian Genetics Unit, Harwell, Oxfordshire OX11 0RD, UK
Bioinformatics 21:2930-1. 2005..We describe a web-based resource for the visualization, searching and downloading of standard operating procedures and other documents, the European Mouse Phenotyping Resource for Standardized Screens-EMPReSS...
- CRAVE: a database, middleware and visualization system for phenotype ontologiesGeorgios V Gkoutos
Bioinformatics Group, MRC Mammalian Genetics Unit, Harwell, Oxfordshire OX11 0RD, UK
Bioinformatics 21:1257-62. 2005..However tools are not currently available to visualize combinations of ontologies. Here we describe CRAVE (Concept Relation Assay Value Explorer), a package allowing storage, active updating and visualization of multiple ontologies...
- Using ontologies to describe mouse phenotypesGeorgios V Gkoutos
Bioinformatics Group, MRC Mammalian Genetics Unit, Harwell, Oxfordshire, OX11 0RD, UK
Genome Biol 6:R8. 2005..This produces a framework with greater flexibility, power and economy than previous approaches. We discuss some of the issues this approach raises...
- Mouse, man, and meaning: bridging the semantics of mouse phenotype and human diseaseJohn M Hancock
Bioinformatics Group, MRC Harwell, Harwell, Oxfordshire, OX11 0RD, UK
Mamm Genome 20:457-61. 2009....
- The Human Phenotype Ontology project: linking molecular biology and disease through phenotype dataSebastian Kohler
Institute for Medical Genetics and Human Genetics, Charite Universitatsmedizin Berlin, Augustenburger Platz 1, 13353 Berlin, Germany, Berlin Brandenburg Center for Regenerative Therapies, Charite Universitatsmedizin Berlin, Augustenburger Platz 1, 13353 Berlin, Germany, Lawrence Berkeley National Laboratory, Mail Stop 84R0171, Berkeley, CA 94720, USA, The Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire CB10 1SA, UK, Department of Medical Genetics, Cambridge University Addenbrooke s Hospital, Cambridge CB2 2QQ, UK, Universite Paul Sabatier, Faculte de Chirurgie Dentaire, CHU Toulouse, France, Centre for Genomic Medicine, Central Manchester University Hospitals NHS Foundation Trust, Manchester Academic Health Sciences Centre MAHSC, Manchester, UK, Centre for Genomic Medicine, Institute of Human Development, Faculty of Medical and Human Sciences, University of Manchester, MAHSC, Manchester M13 9WL, UK, Institute of Genetic Medicine Newcastle University, Central Parkway, Newcastle upon Tyne, NE1 3BZ, UK, Department of Computer Science, University of Toronto, Ontario, Canada
Nucleic Acids Res 42:D966-74. 2014..We have created various ways to access the HPO database content using flat files, a MySQL database, and Web-based tools. All data and documentation on the HPO project can be found online. ..
- Phenotype ontologies: the bridge between genomics and evolutionPaula M Mabee
Department of Biology, University of South Dakota, Vermillion, SD 57069, USA
Trends Ecol Evol 22:345-50. 2007....
- Mouse Phenotype Database Integration Consortium: integration [corrected] of mouse phenome data resourcesJohn M Hancock
Mamm Genome 18:157-63. 2007..This process is ongoing and needs to be supported by the wider mouse genetics and phenotyping communities to succeed. We invite interested parties to contact us as we develop this process further...
- Chemical machine vision: automated extraction of chemical metadata from raster imagesGeorgios V Gkoutos
Department of Chemistry, Imperial College of Science, Technology and Medicine, Exhibition Road, South Kensington, London, England SW7 2AY
J Chem Inf Comput Sci 43:1342-55. 2003..This information can be used for providing chemical metadata descriptors of the original image as part of a robot-based Internet resource discovery tool...