Clive J Hoggart

Summary

Affiliation: London School of Hygiene and Tropical Medicine
Country: UK

Publications

  1. ncbi Skin pigmentation, biogeographical ancestry and admixture mapping
    Mark D Shriver
    Department of Anthropology, Penn State University, 409 Carpenter Bld, University Park, PA 16802, USA
    Hum Genet 112:387-99. 2003
  2. ncbi Control of confounding of genetic associations in stratified populations
    Clive J Hoggart
    Epidemiology Unit, London School of Hygiene and Tropical Medicine, Umited Kingdom
    Am J Hum Genet 72:1492-1504. 2003
  3. ncbi Design and analysis of admixture mapping studies
    C J Hoggart
    Noncommunicable Disease Epidemiology Unit, London School of Hygiene and Tropical Medicine, London WC1E 7HT, United Kingdom
    Am J Hum Genet 74:965-78. 2004
  4. ncbi Genome-wide significance for dense SNP and resequencing data
    Clive J Hoggart
    Department of Epidemiology and Public Health, Imperial College London, Norfolk Place, London, UK
    Genet Epidemiol 32:179-85. 2008
  5. ncbi Simultaneous analysis of all SNPs in genome-wide and re-sequencing association studies
    Clive J Hoggart
    Department of Epidemiology and Public Health, Imperial College, London, United Kingdom
    PLoS Genet 4:e1000130. 2008
  6. ncbi Assessing the relative ages of admixture in the bovine hybrid zones of Africa and the Near East using X chromosome haplotype mosaicism
    Abigail R Freeman
    Smurfit Institute of Genetics, Trinity Colege, Dublin, Ireland
    Genetics 173:1503-10. 2006
  7. ncbi Sequence-level population simulations over large genomic regions
    Clive J Hoggart
    Department of Epidemiology and Public Health, Imperial College, London W2 1PG, United Kingdom
    Genetics 177:1725-31. 2007
  8. ncbi Fregene: simulation of realistic sequence-level data in populations and ascertained samples
    Marc Chadeau-Hyam
    Department of Epidemiology and Public Health, Imperial College, St Mary s Campus, Norfolk Place, London, W2 1PG, UK
    BMC Bioinformatics 9:364. 2008

Detail Information

Publications8

  1. ncbi Skin pigmentation, biogeographical ancestry and admixture mapping
    Mark D Shriver
    Department of Anthropology, Penn State University, 409 Carpenter Bld, University Park, PA 16802, USA
    Hum Genet 112:387-99. 2003
    ..The implications and applications of ancestry estimates in biomedical research are discussed...
  2. ncbi Control of confounding of genetic associations in stratified populations
    Clive J Hoggart
    Epidemiology Unit, London School of Hygiene and Tropical Medicine, Umited Kingdom
    Am J Hum Genet 72:1492-1504. 2003
    ..With only 32 markers informative for ancestry, the efficiency of the analysis is 70%. These methods can deal with both confounding and selection bias in genetic-association studies, making family-based designs unnecessary...
  3. ncbi Design and analysis of admixture mapping studies
    C J Hoggart
    Noncommunicable Disease Epidemiology Unit, London School of Hygiene and Tropical Medicine, London WC1E 7HT, United Kingdom
    Am J Hum Genet 74:965-78. 2004
    ....
  4. ncbi Genome-wide significance for dense SNP and resequencing data
    Clive J Hoggart
    Department of Epidemiology and Public Health, Imperial College London, Norfolk Place, London, UK
    Genet Epidemiol 32:179-85. 2008
    ..We compare our results for sequence data to those derived by the HapMap Consortium and find notable differences which may be due to the small sample sizes used in the HapMap estimate...
  5. ncbi Simultaneous analysis of all SNPs in genome-wide and re-sequencing association studies
    Clive J Hoggart
    Department of Epidemiology and Public Health, Imperial College, London, United Kingdom
    PLoS Genet 4:e1000130. 2008
    ....
  6. ncbi Assessing the relative ages of admixture in the bovine hybrid zones of Africa and the Near East using X chromosome haplotype mosaicism
    Abigail R Freeman
    Smurfit Institute of Genetics, Trinity Colege, Dublin, Ireland
    Genetics 173:1503-10. 2006
    ....
  7. ncbi Sequence-level population simulations over large genomic regions
    Clive J Hoggart
    Department of Epidemiology and Public Health, Imperial College, London W2 1PG, United Kingdom
    Genetics 177:1725-31. 2007
    ....
  8. ncbi Fregene: simulation of realistic sequence-level data in populations and ascertained samples
    Marc Chadeau-Hyam
    Department of Epidemiology and Public Health, Imperial College, St Mary s Campus, Norfolk Place, London, W2 1PG, UK
    BMC Bioinformatics 9:364. 2008
    ..We describe here main functionalities of both FREGENE and SAMPLE, a companion program that can replicate association study datasets...