Jean Christophe Nebel

Summary

Affiliation: Kingston University
Country: UK

Publications

  1. ncbi A stochastic context free grammar based framework for analysis of protein sequences
    Witold Dyrka
    Institute of Biomedical Engineering and Instrumentation, Wroclaw University of Technology, Poland
    BMC Bioinformatics 10:323. 2009
  2. ncbi Generation of 3D templates of active sites of proteins with rigid prosthetic groups
    Jean Christophe Nebel
    Faculty of Computing, Information Systems and Mathematics, Kingston University Kingston upon Thames, Surrey KT1 2EE, UK
    Bioinformatics 22:1183-9. 2006
  3. ncbi Automatic generation of 3D motifs for classification of protein binding sites
    Jean Christophe Nebel
    Faculty of Computing, Information Systems and Mathematics, Kingston University, Kingston upon Thames, KT1 2EE, UK
    BMC Bioinformatics 8:321. 2007
  4. ncbi Why inverse proteins are relatively abundant
    Jean Christophe Nebel
    Faculty of Computing, Information Systems and Mathematics, Kingston University, Kingston upon Thames, KT1 2EE, UK
    Protein Pept Lett 17:854-60. 2010
  5. ncbi Comparative analysis of genomic signal processing for microarray data clustering
    Robert S H Istepanian
    Mobile Information and Network Technologies, Research Centre, Kingston University London, Kingston upon Thames, UK
    IEEE Trans Nanobioscience 10:225-38. 2011
  6. ncbi Fractal dimension and wavelet decomposition for robust microarray data clustering
    Robert S H Istepanian
    Mobile Information and Network Technologies Research Centre MINT, Kingston University, London KT1 2EE, UK
    Conf Proc IEEE Eng Med Biol Soc 2008:4106-9. 2008
  7. ncbi Structure prediction of LDLR-HNP1 complex based on docking enhanced by LDLR binding 3D motif
    Reyhaneh Esmaielbeiki
    Faculty of Science, Engineering and Computing, Kingston University, Kingston upon Thames, KT1 2EE, UK
    Protein Pept Lett 19:458-67. 2012
  8. ncbi Tracking human position and lower body parts using Kalman and particle filters constrained by human biomechanics
    Jesús Martinez del Rincon
    Digital Imaging Research Centre, Kingston University, KT1 2EE Surrey, UK
    IEEE Trans Syst Man Cybern B Cybern 41:26-37. 2011
  9. ncbi Linear predictive coding and wavelet decomposition for robust microarray data clustering
    Robert S H Istepanian
    Mobile Information and Network Technologies Research Centre, Kingston University, London, KT1 2EE
    Conf Proc IEEE Eng Med Biol Soc 2007:4629-32. 2007
  10. ncbi 3D stereophotogrammetric image superimposition onto 3D CT scan images: the future of orthognathic surgery. A pilot study
    Balvinder Khambay
    University of Glasgow Dental School, Scotland, United Kingdom
    Int J Adult Orthodon Orthognath Surg 17:331-41. 2002

Collaborators

Detail Information

Publications10

  1. ncbi A stochastic context free grammar based framework for analysis of protein sequences
    Witold Dyrka
    Institute of Biomedical Engineering and Instrumentation, Wroclaw University of Technology, Poland
    BMC Bioinformatics 10:323. 2009
    ..In order to overcome some of these limitations, we propose a Stochastic Context Free Grammar based framework for the analysis of protein sequences where grammars are induced using a genetic algorithm...
  2. ncbi Generation of 3D templates of active sites of proteins with rigid prosthetic groups
    Jean Christophe Nebel
    Faculty of Computing, Information Systems and Mathematics, Kingston University Kingston upon Thames, Surrey KT1 2EE, UK
    Bioinformatics 22:1183-9. 2006
    ..Since these groups are key elements of protein active sites, the generated 3D patterns are expected to be biologically meaningful...
  3. ncbi Automatic generation of 3D motifs for classification of protein binding sites
    Jean Christophe Nebel
    Faculty of Computing, Information Systems and Mathematics, Kingston University, Kingston upon Thames, KT1 2EE, UK
    BMC Bioinformatics 8:321. 2007
    ..In this paper, we report a method to automatically generate 3D motifs of protein structure binding sites based on consensus atom positions and evaluate it on a set of adenine based ligands...
  4. ncbi Why inverse proteins are relatively abundant
    Jean Christophe Nebel
    Faculty of Computing, Information Systems and Mathematics, Kingston University, Kingston upon Thames, KT1 2EE, UK
    Protein Pept Lett 17:854-60. 2010
    ..Therefore, we suggest the relative abundance of inverse proteins can be explained by the fact they display the same repeat structures and amino acid propensity of existing proteins...
  5. ncbi Comparative analysis of genomic signal processing for microarray data clustering
    Robert S H Istepanian
    Mobile Information and Network Technologies, Research Centre, Kingston University London, Kingston upon Thames, UK
    IEEE Trans Nanobioscience 10:225-38. 2011
    ..The results of this study show that the fractal approach provides the best clustering accuracy compared to other digital signal processing and well known statistical methods...
  6. ncbi Fractal dimension and wavelet decomposition for robust microarray data clustering
    Robert S H Istepanian
    Mobile Information and Network Technologies Research Centre MINT, Kingston University, London KT1 2EE, UK
    Conf Proc IEEE Eng Med Biol Soc 2008:4106-9. 2008
    ..Comparative analysis of the results indicates that these methods provide improved clustering accuracy compared to some conventional clustering techniques. Moreover, these classifiers don't require any prior training procedures...
  7. ncbi Structure prediction of LDLR-HNP1 complex based on docking enhanced by LDLR binding 3D motif
    Reyhaneh Esmaielbeiki
    Faculty of Science, Engineering and Computing, Kingston University, Kingston upon Thames, KT1 2EE, UK
    Protein Pept Lett 19:458-67. 2012
    ..The putative identification of the receptor binding mechanism should inform the future design of synthetic HNPs to afford maximum internalisation, which could lead to novel anti-infective drugs...
  8. ncbi Tracking human position and lower body parts using Kalman and particle filters constrained by human biomechanics
    Jesús Martinez del Rincon
    Digital Imaging Research Centre, Kingston University, KT1 2EE Surrey, UK
    IEEE Trans Syst Man Cybern B Cybern 41:26-37. 2011
    ..Experiments on a set of indoor and outdoor sequences demonstrate the effectiveness of our method on tracking human lower body parts. Moreover, a detail comparison with current tracking methods is presented...
  9. ncbi Linear predictive coding and wavelet decomposition for robust microarray data clustering
    Robert S H Istepanian
    Mobile Information and Network Technologies Research Centre, Kingston University, London, KT1 2EE
    Conf Proc IEEE Eng Med Biol Soc 2007:4629-32. 2007
    ..Comparative analyses of the results indicate that these methods provide improved clustering accuracy compared to some conventional clustering techniques. Moreover, there classifiers don't require any prior training procedures...
  10. ncbi 3D stereophotogrammetric image superimposition onto 3D CT scan images: the future of orthognathic surgery. A pilot study
    Balvinder Khambay
    University of Glasgow Dental School, Scotland, United Kingdom
    Int J Adult Orthodon Orthognath Surg 17:331-41. 2002
    ..25 and 1.5 mm using partial Procrustes analysis based on anatomic landmarks and then registration completion by HICP...