E G Zoetendal

Summary

Affiliation: Wageningen University
Country: The Netherlands

Publications

  1. pmc A comprehensive metatranscriptome analysis pipeline and its validation using human small intestine microbiota datasets
    Milkha M Leimena
    TI Food and Nutrition TIFN, P, O, Box 557, 6700 AN, Wageningen, The Netherlands
    BMC Genomics 14:530. 2013
  2. pmc The human small intestinal microbiota is driven by rapid uptake and conversion of simple carbohydrates
    Erwin G Zoetendal
    TI Food and Nutrition, Wageningen, The Netherlands
    ISME J 6:1415-26. 2012
  3. doi request reprint High-throughput diversity and functionality analysis of the gastrointestinal tract microbiota
    E G Zoetendal
    Laboratory of Microbiology, Wageningen University, Dreijenplein 10, 6703 HB Wageningen, The Netherlands
    Gut 57:1605-15. 2008
  4. ncbi request reprint Diversity of the Lactobacillus group in breast milk and vagina of healthy women and potential role in the colonization of the infant gut
    R Martin
    Departament of NutriciĆ³n, Bromatologia y Tecnologia de los Alimentos, Universidad Complutense de Madrid, Madrid, Spain
    J Appl Microbiol 103:2638-44. 2007
  5. ncbi request reprint Caloramator coolhaasii sp. nov., a glutamate-degrading, moderately thermophilic anaerobe
    C M Plugge
    Laboratory of Microbiology, Wageningen University, The Netherlands
    Int J Syst Evol Microbiol 50:1155-62. 2000
  6. pmc Microarray analysis and barcoded pyrosequencing provide consistent microbial profiles depending on the source of human intestinal samples
    Bartholomeus van den Bogert
    Laboratory of Microbiology, Wageningen University, Dreijenplein 10, 6703 HB Wageningen, Netherlands
    Appl Environ Microbiol 77:2071-80. 2011
  7. pmc Genome sequence of Victivallis vadensis ATCC BAA-548, an anaerobic bacterium from the phylum Lentisphaerae, isolated from the human gastrointestinal tract
    Mark W J van Passel
    Laboratory of Microbiology, University of Wageningen, Dreijenplein 10, 6703 HB Wageningen, The Netherlands
    J Bacteriol 193:2373-4. 2011

Collaborators

Detail Information

Publications7

  1. pmc A comprehensive metatranscriptome analysis pipeline and its validation using human small intestine microbiota datasets
    Milkha M Leimena
    TI Food and Nutrition TIFN, P, O, Box 557, 6700 AN, Wageningen, The Netherlands
    BMC Genomics 14:530. 2013
    ..In this study, we focus on the development of such a metatranscriptome pipeline, which we validate using Illumina RNA-seq datasets derived from the small intestine microbiota of two individuals with an ileostomy...
  2. pmc The human small intestinal microbiota is driven by rapid uptake and conversion of simple carbohydrates
    Erwin G Zoetendal
    TI Food and Nutrition, Wageningen, The Netherlands
    ISME J 6:1415-26. 2012
    ..Overall, our findings suggest that rapid uptake and fermentation of available carbohydrates contribute to maintaining the microbiota in the human small intestine...
  3. doi request reprint High-throughput diversity and functionality analysis of the gastrointestinal tract microbiota
    E G Zoetendal
    Laboratory of Microbiology, Wageningen University, Dreijenplein 10, 6703 HB Wageningen, The Netherlands
    Gut 57:1605-15. 2008
    ....
  4. ncbi request reprint Diversity of the Lactobacillus group in breast milk and vagina of healthy women and potential role in the colonization of the infant gut
    R Martin
    Departament of NutriciĆ³n, Bromatologia y Tecnologia de los Alimentos, Universidad Complutense de Madrid, Madrid, Spain
    J Appl Microbiol 103:2638-44. 2007
    ..To evaluate the diversity of the Lactobacillus group in breast milk and the vagina of healthy women and understand their potential role in the infant gut colonization using the 16S rRNA gene approaches...
  5. ncbi request reprint Caloramator coolhaasii sp. nov., a glutamate-degrading, moderately thermophilic anaerobe
    C M Plugge
    Laboratory of Microbiology, Wageningen University, The Netherlands
    Int J Syst Evol Microbiol 50:1155-62. 2000
    ..The G+C content was 31.7 mol%. Based on its morphological, phylogenetic and physiological characteristics, it is proposed that strain ZT should be classified in the genus Caloramator as a new species, Caloramator coolhaasii...
  6. pmc Microarray analysis and barcoded pyrosequencing provide consistent microbial profiles depending on the source of human intestinal samples
    Bartholomeus van den Bogert
    Laboratory of Microbiology, Wageningen University, Dreijenplein 10, 6703 HB Wageningen, Netherlands
    Appl Environ Microbiol 77:2071-80. 2011
    ..Overall, this study demonstrated that equivalent biological conclusions are obtained by high-throughput profiling of microbial communities, independent of technology or primer choice...
  7. pmc Genome sequence of Victivallis vadensis ATCC BAA-548, an anaerobic bacterium from the phylum Lentisphaerae, isolated from the human gastrointestinal tract
    Mark W J van Passel
    Laboratory of Microbiology, University of Wageningen, Dreijenplein 10, 6703 HB Wageningen, The Netherlands
    J Bacteriol 193:2373-4. 2011
    ..Few cultured bacteria from this phylum are known, and V. vadensis therefore represents an important organism for evolutionary studies. V. vadensis is a strictly anaerobic sugar-fermenting isolate from the human gastrointestinal tract...