Sebastiaan Horsman

Summary

Affiliation: Erasmus MC
Country: The Netherlands

Publications

  1. ncbi TF Target Mapper: a BLAST search tool for the identification of Transcription Factor target genes
    Sebastiaan Horsman
    Department of Cell Biology, Erasmus Medical Center, Dr Molewaterplein 50, 3015GE Rotterdam, The Netherlands
    BMC Bioinformatics 7:120. 2006
  2. ncbi SNPExpress: integrated visualization of genome-wide genotypes, copy numbers and gene expression levels
    Mathijs A Sanders
    Department of Hematology, Erasmus University Medical Center, Rotterdam, The Netherlands
    BMC Genomics 9:41. 2008
  3. ncbi HeatMapper: powerful combined visualization of gene expression profile correlations, genotypes, phenotypes and sample characteristics
    Roel G W Verhaak
    Department of Hematology, Erasmus University Medical Center, Rotterdam, The Netherlands
    BMC Bioinformatics 7:337. 2006
  4. ncbi Identification of differentially regulated splice variants and novel exons in glial brain tumors using exon expression arrays
    Pim J French
    Department of Neurology, Erasmus MC, Rotterdam, The Netherlands
    Cancer Res 67:5635-42. 2007

Collaborators

Detail Information

Publications4

  1. ncbi TF Target Mapper: a BLAST search tool for the identification of Transcription Factor target genes
    Sebastiaan Horsman
    Department of Cell Biology, Erasmus Medical Center, Dr Molewaterplein 50, 3015GE Rotterdam, The Netherlands
    BMC Bioinformatics 7:120. 2006
    ..Such bioinformatics analysis is very laborious if performed manually and for this reason there is a need for developing bioinformatic tools to automate and facilitate it...
  2. ncbi SNPExpress: integrated visualization of genome-wide genotypes, copy numbers and gene expression levels
    Mathijs A Sanders
    Department of Hematology, Erasmus University Medical Center, Rotterdam, The Netherlands
    BMC Genomics 9:41. 2008
    ..In fact, obtaining an integrated view of both large scale SNP genotyping and gene expression is currently complicated since only a limited number of appropriate software tools are available...
  3. ncbi HeatMapper: powerful combined visualization of gene expression profile correlations, genotypes, phenotypes and sample characteristics
    Roel G W Verhaak
    Department of Hematology, Erasmus University Medical Center, Rotterdam, The Netherlands
    BMC Bioinformatics 7:337. 2006
    ..Here, we describe an approach to visually integrate the results of unsupervised and supervised cluster analysis using a correlation plot and additional sample metadata...
  4. ncbi Identification of differentially regulated splice variants and novel exons in glial brain tumors using exon expression arrays
    Pim J French
    Department of Neurology, Erasmus MC, Rotterdam, The Netherlands
    Cancer Res 67:5635-42. 2007
    ..The splice variants identified by exon level expression profiling may help to detect the genetic changes that cause or maintain gliomas and may serve as novel treatment targets...