Robert M Waterhouse

Summary

Affiliation: University of Geneva
Country: Switzerland

Publications

  1. pmc Finding the missing honey bee genes: lessons learned from a genome upgrade
    Christine G Elsik
    Division of Animal Sciences, Division of Plant Sciences, and MU Informatics Institute, University of Missouri, Columbia, MO 65211, USA
    BMC Genomics 15:86. 2014
  2. pmc Sequence-structure-function relations of the mosquito leucine-rich repeat immune proteins
    Robert M Waterhouse
    Department of Genetic Medicine and Development, University of Geneva Medical School, 1 rue Michel Servet, 1211 Geneva, Switzerland
    BMC Genomics 11:531. 2010
  3. pmc Correlating traits of gene retention, sequence divergence, duplicability and essentiality in vertebrates, arthropods, and fungi
    Robert M Waterhouse
    Department of Genetic Medicine and Development, University of Geneva Medical School, Geneva, Switzerland
    Genome Biol Evol 3:75-86. 2011
  4. pmc OrthoDB: a hierarchical catalog of animal, fungal and bacterial orthologs
    Robert M Waterhouse
    Department of Genetic Medicine and Development, University of Geneva Medical School, 1211 Geneva, Switzerland
    Nucleic Acids Res 41:D358-65. 2013
  5. pmc OrthoDB: the hierarchical catalog of eukaryotic orthologs in 2011
    Robert M Waterhouse
    Department of Genetic Medicine and Development, University of Geneva Medical School, Swiss Institute of Bioinformatics, Rue Michel Servet 1, 1211 Geneva, Switzerland
    Nucleic Acids Res 39:D283-8. 2011
  6. pmc A remarkably stable TipE gene cluster: evolution of insect Para sodium channel auxiliary subunits
    Jia Li
    Department of Genetic Medicine and Development, University of Geneva Medical School, Rue Michel Servet 1, 1211 Geneva, Switzerland
    BMC Evol Biol 11:337. 2011
  7. pmc OrthoDB v8: update of the hierarchical catalog of orthologs and the underlying free software
    Evgenia V Kriventseva
    Department of Genetic Medicine and Development, University of Geneva Medical School, Rue Michel Servet 1, 1211 Geneva, Switzerland Swiss Institute of Bioinformatics, Rue Michel Servet 1, 1211 Geneva, Switzerland
    Nucleic Acids Res 43:D250-6. 2015

Collaborators

  • Evgeny M Zdobnov
  • Evgenia V Kriventseva
  • Jia Li
  • Christine G Elsik
  • Ryszard Maleszka
  • Vandita Joshi
  • Roderic Guigo
  • Dirk C de Graaf
  • Griet Debyser
  • Matthias Van Vaerenbergh
  • Charles W Whitfield
  • Bart Devreese
  • Hugh M Robertson
  • Anna K Bennett
  • Donna M Muzny
  • Dan Graur
  • Daniel B Weaver
  • Jian Ma
  • Justin T Reese
  • Robin F A Moritz
  • Jixin Deng
  • Kim C Worley
  • Radhika S Khetani
  • Leonard J Foster
  • Jay D Evans
  • Jennifer M Tsuruda
  • Francisco Camara
  • Dianhui Zhu
  • Eckart Stolle
  • Irene F Newsham
  • Peter Kosarev
  • Gene E Robinson
  • Matthew E Hudson
  • Katharina Jasmin Hoff
  • Christie L Kovar
  • Eran Elhaik
  • Michael E Holder
  • Richard A Gibbs
  • Mario Stanke
  • Greg J Hunt
  • Christopher P Childers
  • YuanQing Wu
  • Lan Zhang
  • Huaiyang Jiang
  • Martin Beye
  • Monica C Muñoz-Torres
  • Victor Solovyev
  • Terence D Murphy
  • Olav Rueppell

Detail Information

Publications7

  1. pmc Finding the missing honey bee genes: lessons learned from a genome upgrade
    Christine G Elsik
    Division of Animal Sciences, Division of Plant Sciences, and MU Informatics Institute, University of Missouri, Columbia, MO 65211, USA
    BMC Genomics 15:86. 2014
    ..0) compared to what would be expected based on other sequenced insect genomes...
  2. pmc Sequence-structure-function relations of the mosquito leucine-rich repeat immune proteins
    Robert M Waterhouse
    Department of Genetic Medicine and Development, University of Geneva Medical School, 1 rue Michel Servet, 1211 Geneva, Switzerland
    BMC Genomics 11:531. 2010
    ..In addition to their LRR domains, these leucine-rich repeat immune (LRIM) proteins share several structural features including signal peptides, patterns of cysteine residues, and coiled-coil domains...
  3. pmc Correlating traits of gene retention, sequence divergence, duplicability and essentiality in vertebrates, arthropods, and fungi
    Robert M Waterhouse
    Department of Genetic Medicine and Development, University of Geneva Medical School, Geneva, Switzerland
    Genome Biol Evol 3:75-86. 2011
    ....
  4. pmc OrthoDB: a hierarchical catalog of animal, fungal and bacterial orthologs
    Robert M Waterhouse
    Department of Genetic Medicine and Development, University of Geneva Medical School, 1211 Geneva, Switzerland
    Nucleic Acids Res 41:D358-65. 2013
    ..With the explosive growth of available data, OrthoDB also provides mapping of newly sequenced genomes and transcriptomes to the current orthologous groups...
  5. pmc OrthoDB: the hierarchical catalog of eukaryotic orthologs in 2011
    Robert M Waterhouse
    Department of Genetic Medicine and Development, University of Geneva Medical School, Swiss Institute of Bioinformatics, Rue Michel Servet 1, 1211 Geneva, Switzerland
    Nucleic Acids Res 39:D283-8. 2011
    ..OrthoDB is freely accessible from http://cegg.unige.ch/orthodb...
  6. pmc A remarkably stable TipE gene cluster: evolution of insect Para sodium channel auxiliary subunits
    Jia Li
    Department of Genetic Medicine and Development, University of Geneva Medical School, Rue Michel Servet 1, 1211 Geneva, Switzerland
    BMC Evol Biol 11:337. 2011
    ..Here, we exploited available arthropod genomic resources to trace the origin of TipE-like genes by mapping their evolutionary histories and examining their genomic architectures...
  7. pmc OrthoDB v8: update of the hierarchical catalog of orthologs and the underlying free software
    Evgenia V Kriventseva
    Department of Genetic Medicine and Development, University of Geneva Medical School, Rue Michel Servet 1, 1211 Geneva, Switzerland Swiss Institute of Bioinformatics, Rue Michel Servet 1, 1211 Geneva, Switzerland
    Nucleic Acids Res 43:D250-6. 2015
    ..Gene copy-number profiles can also be queried. This release comes with the freely available underlying ortholog clustering pipeline (http://www.orthodb.org/software). ..